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Lag0006364 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006364
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:41641498..41642010
RNA-Seq ExpressionLag0006364
SyntenyLag0006364
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNY15110.1 cysteine desulfurase mitochondrial-like [Trifolium pratense]8.8e-2337.42Show/hide
Query:  LNEWKNFNLMDGEKETFIVLDREEEKDIHGK--LERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDK
        ++ WKN NL   E+E  +     EE+D +G+    R L GKL +         K  + +AW+ ++++ +E + KN+FLF+F  + D D VLK+GPW FD+
Subjt:  LNEWKNFNLMDGEKETFIVLDREEEKDIHGK--LERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDK

Query:  HLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVD
        +L+IL       +  D+E  + AFW+R+  LP+  R+ S+A+K+GNI+G F E D
Subjt:  HLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVD

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.5e-2236.75Show/hide
Query:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGP
        M    LL EWKNF L   E +  + +D    +     LE  LI KLLS R I  + +KN L  AWK   K  +++ +G N+FLF F    DR+ +L+ GP
Subjt:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGP

Query:  WFFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF
        W FD+ LII++ P    +  DM+F+  + W+   +L +   NK++A ++GN +G F +V+S  + F
Subjt:  WFFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.7e-3040Show/hide
Query:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPW
        MD E LL +W+ F L   E E  + +D +  K     L   L+GKLL+ R+I A  +   L  AWK   ++ +E++GKN+FLF F  + D + V+K+GPW
Subjt:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPW

Query:  FFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF
        FFDK LI+L++P  ++ I+++EF   AFW+ L +LP+ + NK++A ++GN +G+F++VD  +  F
Subjt:  FFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.8e-2336.71Show/hide
Query:  ELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGPWFFD
        +LL EWKNF L   E+ET I +D         +LE+ L+GKL   R I    +KN +  AWK  +    ++++G N+FLF F   LDR+ + KSGPW FD
Subjt:  ELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGPWFFD

Query:  KHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSE
        + L+++ +P      ++++F +   W+R  +LP+G   + +A ++GN LG F E D +
Subjt:  KHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSE

XP_024042744.1 uncharacterized protein LOC112099563 [Citrus clementina]1.3e-2134.97Show/hide
Query:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPW
        MD EEL+ + K  ++ +G +    +    EEK     +   LIGK+L SR +    I+NAL +AW+T  ++ IE++G N+ +FKF  ++D+  VL  GPW
Subjt:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPW

Query:  FFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKD
         FD+ LI+L+EP     +    F   AFW+++ N+P+    +   +K+G +LG  LEV+++ +
Subjt:  FFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKD

TrEMBL top hitse value%identityAlignment
A0A2K3PII7 Cysteine desulfurase mitochondrial-like4.3e-2337.42Show/hide
Query:  LNEWKNFNLMDGEKETFIVLDREEEKDIHGK--LERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDK
        ++ WKN NL   E+E  +     EE+D +G+    R L GKL +         K  + +AW+ ++++ +E + KN+FLF+F  + D D VLK+GPW FD+
Subjt:  LNEWKNFNLMDGEKETFIVLDREEEKDIHGK--LERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDK

Query:  HLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVD
        +L+IL       +  D+E  + AFW+R+  LP+  R+ S+A+K+GNI+G F E D
Subjt:  HLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVD

A0A392MLA7 Zinc CCHC-type-like protein (Fragment)8.0e-2233.99Show/hide
Query:  EWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDKHLII
        EW+   L   E+E    ++ EE  +     +R L+GKL +         K  +++AW+ ++ + ++ + KN+FLF+F  + D D V+K+GPW FD++L++
Subjt:  EWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDKHLII

Query:  LEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSE
        L+      + +D+E     FW R+ +LP+  R++S+A+K+G+I+GSF+EVDS+
Subjt:  LEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSE

A0A6J1BSZ1 uncharacterized protein LOC1110054817.3e-2336.75Show/hide
Query:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGP
        M    LL EWKNF L   E +  + +D    +     LE  LI KLLS R I  + +KN L  AWK   K  +++ +G N+FLF F    DR+ +L+ GP
Subjt:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGP

Query:  WFFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF
        W FD+ LII++ P    +  DM+F+  + W+   +L +   NK++A ++GN +G F +V+S  + F
Subjt:  WFFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF

A0A6J1DU55 uncharacterized protein LOC1110231352.7e-3040Show/hide
Query:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPW
        MD E LL +W+ F L   E E  + +D +  K     L   L+GKLL+ R+I A  +   L  AWK   ++ +E++GKN+FLF F  + D + V+K+GPW
Subjt:  MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPW

Query:  FFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF
        FFDK LI+L++P  ++ I+++EF   AFW+ L +LP+ + NK++A ++GN +G+F++VD  +  F
Subjt:  FFDKHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEF

A0A6J1DX30 uncharacterized protein LOC1110248748.6e-2436.71Show/hide
Query:  ELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGPWFFD
        +LL EWKNF L   E+ET I +D         +LE+ L+GKL   R I    +KN +  AWK  +    ++++G N+FLF F   LDR+ + KSGPW FD
Subjt:  ELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSK-INIETVGKNVFLFKFEDQLDRDWVLKSGPWFFD

Query:  KHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSE
        + L+++ +P      ++++F +   W+R  +LP+G   + +A ++GN LG F E D +
Subjt:  KHLIILEEPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein1.6e-0627.5Show/hide
Query:  LIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDKHLIILE--EPRVNRRITDMEFKEEAFWLRLINLPIGF
        L G+ +  R     +I  ++ R W     ++   +    F F F  +   + VL+ GPW F+  +I+L+  EP++        F    FW+++  +P  F
Subjt:  LIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDKHLIILE--EPRVNRRITDMEFKEEAFWLRLINLPIGF

Query:  RNKSVAEKIGNILGSFLEVD
         N+ V E IG  LG  L+ D
Subjt:  RNKSVAEKIGNILGSFLEVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGGAGGAACTATTAAATGAGTGGAAAAACTTTAACTTGATGGATGGAGAAAAAGAAACCTTCATAGTTCTGGATCGAGAGGAAGAAAAAGACATCCATGGAAA
ATTGGAGCGATGTTTAATTGGCAAGCTCCTGTCTAGCCGTGTTATTGTCGCATCAACGATCAAGAATGCCTTATCTAGAGCATGGAAAACAAGAAGTAAGATAAATATTG
AAACAGTTGGAAAGAATGTGTTCTTGTTCAAATTTGAAGATCAGTTGGACAGAGATTGGGTGCTAAAAAGTGGACCATGGTTCTTTGATAAGCATCTTATTATTCTTGAA
GAGCCAAGAGTTAATAGAAGAATAACAGACATGGAGTTCAAAGAAGAGGCGTTTTGGCTTAGGCTAATAAACTTACCAATAGGCTTCCGCAATAAATCAGTAGCTGAAAA
GATTGGGAATATTCTCGGTAGTTTCCTTGAGGTGGACAGTGAAAAAGATGAGTTTGTTGGGGCAACAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATGGAGGAACTATTAAATGAGTGGAAAAACTTTAACTTGATGGATGGAGAAAAAGAAACCTTCATAGTTCTGGATCGAGAGGAAGAAAAAGACATCCATGGAAA
ATTGGAGCGATGTTTAATTGGCAAGCTCCTGTCTAGCCGTGTTATTGTCGCATCAACGATCAAGAATGCCTTATCTAGAGCATGGAAAACAAGAAGTAAGATAAATATTG
AAACAGTTGGAAAGAATGTGTTCTTGTTCAAATTTGAAGATCAGTTGGACAGAGATTGGGTGCTAAAAAGTGGACCATGGTTCTTTGATAAGCATCTTATTATTCTTGAA
GAGCCAAGAGTTAATAGAAGAATAACAGACATGGAGTTCAAAGAAGAGGCGTTTTGGCTTAGGCTAATAAACTTACCAATAGGCTTCCGCAATAAATCAGTAGCTGAAAA
GATTGGGAATATTCTCGGTAGTTTCCTTGAGGTGGACAGTGAAAAAGATGAGTTTGTTGGGGCAACAATATGA
Protein sequenceShow/hide protein sequence
MDMEELLNEWKNFNLMDGEKETFIVLDREEEKDIHGKLERCLIGKLLSSRVIVASTIKNALSRAWKTRSKINIETVGKNVFLFKFEDQLDRDWVLKSGPWFFDKHLIILE
EPRVNRRITDMEFKEEAFWLRLINLPIGFRNKSVAEKIGNILGSFLEVDSEKDEFVGATI