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Lag0006366 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006366
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr6:41653007..41654109
RNA-Seq ExpressionLag0006366
SyntenyLag0006366
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2284496.1 hypothetical protein Bca52824_055716 [Brassica carinata]3.1e-2555.24Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW + DK+CLPK  GG+ FRD+E FNQA L KQ W++LSSP    A+F KS Y  N S LDA L    SY W+SLL+GRDLL+KG+Q R+ DG  I ++
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWI
         D WI
Subjt:  KDPWI

XP_009140188.1 uncharacterized protein LOC103864181 [Brassica rapa]9.0e-2555.24Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW S DK+CL K +GGL FRD+E FNQA L KQ W++LSSPE+  A+F+KS Y  N   L+ASL +  SY W+SLL+GR+LL KGI+ R+ DG  I ++
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWI
         D WI
Subjt:  KDPWI

XP_013645762.1 uncharacterized protein LOC106350421 [Brassica napus]2.8e-2654.29Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        MHW S +++C+PK  GGL FRD+E FNQA LNKQVWRLL  PE  AA+ +K+ Y+   SIL+A   R +SY+WKSLL+GRDLL++G++F + +G  + M+
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWI
         DPW+
Subjt:  KDPWI

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]5.1e-2849.56Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW S ++MCLPK  GGLNFRD+EGFNQA + KQVWR+L +P    ++ +K+ Y  +  +L A+  R+ SY WK  +WGRDLL+KG++ R+ +G  I +F
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWIPKVNTFKP
         DPWIP+  +F+P
Subjt:  KDPWIPKVNTFKP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-2752.21Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW    +MC PK  GGLNFRD+EGFNQA + K VWR L  P    +K +K  Y K+ S+L AS    SSY WK  LWGRDLL+KG++ R+ +G  I+ F
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWIPKVNTFKP
         DPW+P+  TFKP
Subjt:  KDPWIPKVNTFKP

TrEMBL top hitse value%identityAlignment
A0A2P6SDG4 Putative RNA-directed DNA polymerase4.8e-2446.02Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW + +K+C PKC GGL FR+M  FN A L KQ WRL+  P++  AK +K+ Y   CS L+A L    SY W+S+L GR +L KG++F++ DG  I ++
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWIPKVNTFKP
         DPW+P   +F+P
Subjt:  KDPWIPKVNTFKP

A0A6D2KLU0 Reverse transcriptase domain-containing protein3.7e-2439.86Show/hide
Query:  HWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFK
        HW S ++MCLPK  GG+ FRD+E FNQA L KQ W++L  PE+   KF+KS Y  + S L++ +    SY W+S++WGR+LL+KG++ R+ +G  + ++ 
Subjt:  HWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFK

Query:  DPWIPKVNTFKPCCRAREIWEIT--FNRVFLEKNFNGIFVDRW
        DPWI            R +W +T  F    L K+    +  RW
Subjt:  DPWIPKVNTFKPCCRAREIWEIT--FNRVFLEKNFNGIFVDRW

A0A6J0MM33 uncharacterized protein LOC1088447551.6e-2450.96Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW +CD++CLPK  GGL F+D+E FNQ  L KQ W++L+S     A+F+KS Y      L+  LW  SSY W+SLLWGR+LL+KGIQ R+ DG  I ++
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPW
         D W
Subjt:  KDPW

A0A6J1BRN0 uncharacterized protein LOC1110047872.5e-2849.56Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW S ++MCLPK  GGLNFRD+EGFNQA + KQVWR+L +P    ++ +K+ Y  +  +L A+  R+ SY WK  +WGRDLL+KG++ R+ +G  I +F
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWIPKVNTFKP
         DPWIP+  +F+P
Subjt:  KDPWIPKVNTFKP

A0A6J1DX30 uncharacterized protein LOC1110248745.5e-2852.21Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        +HW    +MC PK  GGLNFRD+EGFNQA + K VWR L  P    +K +K  Y K+ S+L AS    SSY WK  LWGRDLL+KG++ R+ +G  I+ F
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWIPKVNTFKP
         DPW+P+  TFKP
Subjt:  KDPWIPKVNTFKP

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003109.7e-1436.54Show/hide
Query:  WSSCDKMCLPK-CFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFK
        W +  K+C  K   GGL FRD+  FNQA L KQ +R++  P T  ++ ++S Y  + S+++ S+    SY W+S++ GR+LL +G+   + DG   +++ 
Subjt:  WSSCDKMCLPK-CFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFK

Query:  DPWI
        D WI
Subjt:  DPWI

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein6.4e-0536.14Show/hide
Query:  IKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFKDPWIPKVNTFKPCCRAREIWEITFNRVFLEK
        +K+ Y K+ SILDA + +  SY W SLL G  LL KG +  + DG+ I +  D  I   +  +P        E+T N +F  K
Subjt:  IKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFKDPWIPKVNTFKPCCRAREIWEITFNRVFLEK

AT4G29090.1 Ribonuclease H-like superfamily protein2.8e-1637.14Show/hide
Query:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF
        MHW + D +   K  GG+ F+D+E FN A L KQ+WR+LS PE+  AK  KS Y      L+A L    S++WKS+   +++L +G +  + +G  I ++
Subjt:  MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMF

Query:  KDPWI
        +  W+
Subjt:  KDPWI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.9e-1536.54Show/hide
Query:  WSSCDKMCLPK-CFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFK
        W +  K+C  K   GGL FRD+  FNQA L KQ +R++  P T  ++ ++S Y  + S+++ S+    SY W+S++ GR+LL +G+   + DG   +++ 
Subjt:  WSSCDKMCLPK-CFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFK

Query:  DPWI
        D WI
Subjt:  DPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTGGTCTAGTTGTGATAAGATGTGTCTTCCTAAGTGTTTTGGGGGATTAAATTTTAGGGACATGGAAGGTTTTAACCAAGCTCAGCTAAACAAACAAGTGTGGAG
GTTGTTATCTTCCCCTGAAACTCAGGCAGCCAAGTTTATTAAAAGTATATATCATAAAAACTGCAGTATTCTTGATGCCAGCCTTTGGAGGTCCTCATCCTATCTTTGGA
AGAGCTTGCTTTGGGGGAGAGACCTTTTATTAAAGGGTATTCAGTTCAGGTTGAGAGATGGGAGGAAGATAGAGATGTTTAAGGATCCTTGGATCCCAAAAGTAAATACT
TTTAAACCGTGTTGCAGAGCTAGAGAAATTTGGGAGATTACCTTCAATAGAGTTTTCCTGGAGAAAAATTTCAACGGTATCTTCGTGGACAGATGGATGAAAATCAACGA
CACCTGCTCATCATTGGAACTAGGGCTTGTTGCGGTTTCGTGTTGGTCCATTTGGATTGACATGAATAAAATCTGTCATGAAGAAGTCATTCCCTCAACCTCTATTAGAA
GCCAATGGATTGTTGAGTACTTAAAGAAATACTTGGAAGAAAATTCGAAATTTGTTGCAAAAGAATCTGGAAATCGAGCGTCGAGGCAGCATGCTATCTCAGAAGAATGG
TCTCCTCCACCTGATGAGTTCTGGAAATTTAACGTTAATGTGGCATGGTCTTCATCCTCTCTGACGACGGGCAACAACATCATTGGTAGAAAGTTGAATGGGGATATAGG
AGTGATTGCATTGAAATCTTTGGATGTGTGTTTTGATGGCCCTGTCTTGGGTTTTATGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTGGTCTAGTTGTGATAAGATGTGTCTTCCTAAGTGTTTTGGGGGATTAAATTTTAGGGACATGGAAGGTTTTAACCAAGCTCAGCTAAACAAACAAGTGTGGAG
GTTGTTATCTTCCCCTGAAACTCAGGCAGCCAAGTTTATTAAAAGTATATATCATAAAAACTGCAGTATTCTTGATGCCAGCCTTTGGAGGTCCTCATCCTATCTTTGGA
AGAGCTTGCTTTGGGGGAGAGACCTTTTATTAAAGGGTATTCAGTTCAGGTTGAGAGATGGGAGGAAGATAGAGATGTTTAAGGATCCTTGGATCCCAAAAGTAAATACT
TTTAAACCGTGTTGCAGAGCTAGAGAAATTTGGGAGATTACCTTCAATAGAGTTTTCCTGGAGAAAAATTTCAACGGTATCTTCGTGGACAGATGGATGAAAATCAACGA
CACCTGCTCATCATTGGAACTAGGGCTTGTTGCGGTTTCGTGTTGGTCCATTTGGATTGACATGAATAAAATCTGTCATGAAGAAGTCATTCCCTCAACCTCTATTAGAA
GCCAATGGATTGTTGAGTACTTAAAGAAATACTTGGAAGAAAATTCGAAATTTGTTGCAAAAGAATCTGGAAATCGAGCGTCGAGGCAGCATGCTATCTCAGAAGAATGG
TCTCCTCCACCTGATGAGTTCTGGAAATTTAACGTTAATGTGGCATGGTCTTCATCCTCTCTGACGACGGGCAACAACATCATTGGTAGAAAGTTGAATGGGGATATAGG
AGTGATTGCATTGAAATCTTTGGATGTGTGTTTTGATGGCCCTGTCTTGGGTTTTATGTCTTAA
Protein sequenceShow/hide protein sequence
MHWSSCDKMCLPKCFGGLNFRDMEGFNQAQLNKQVWRLLSSPETQAAKFIKSIYHKNCSILDASLWRSSSYLWKSLLWGRDLLLKGIQFRLRDGRKIEMFKDPWIPKVNT
FKPCCRAREIWEITFNRVFLEKNFNGIFVDRWMKINDTCSSLELGLVAVSCWSIWIDMNKICHEEVIPSTSIRSQWIVEYLKKYLEENSKFVAKESGNRASRQHAISEEW
SPPPDEFWKFNVNVAWSSSSLTTGNNIIGRKLNGDIGVIALKSLDVCFDGPVLGFMS