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Lag0006373 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006373
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr6:41740054..41740560
RNA-Seq ExpressionLag0006373
SyntenyLag0006373
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273082.1 unnamed protein product [Prunus armeniaca]2.2e-1030.06Show/hide
Query:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ------ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLI
        +W IW I RN      ++I      +   D + ++  + +      +      +       +W KP     K+N DAAW  +   GG+GW V DS G ++
Subjt:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ------ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLI

Query:  CIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLS-LQVESDALSVIKALNGEDDDQSELKLIVDGILVD
          G K          +EA AI E + A    C+Q+GLS L+VESD+L VI+ + GE      + + VD I+ D
Subjt:  CIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLS-LQVESDALSVIKALNGEDDDQSELKLIVDGILVD

KAF7806899.1 uncharacterized protein G2W53_039060 [Senna tora]5.8e-1132.1Show/hide
Query:  WNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTKKM
        +N+W  RRN  +        + ++      +KD     +  S+ CS+ +HAS   WE+P P F+KIN DA+  K+   GGIG    D SG ++    K++
Subjt:  WNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTKKM

Query:  NHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGI
            ++ +LEATAI  G++   +  IQ+   + VE D+  V+  L+     +S L LI+D I
Subjt:  NHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGI

KAF7827258.1 uncharacterized protein G2W53_018422 [Senna tora]1.7e-1031.48Show/hide
Query:  WNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTKKM
        +N+W+ RRN  +        + ++   ++ +KD     +  S+ CS+ +HA    WE+P P F+KIN DA+  K+   GGIG    D SG ++    K++
Subjt:  WNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTKKM

Query:  NHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGI
            ++ +LEATAI  G++   +  IQ+   + VE D+  V+  L      +S L LI+D I
Subjt:  NHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGI

XP_021753633.1 uncharacterized protein LOC110719026 [Chenopodium quinoa]1.5e-1130.72Show/hide
Query:  WNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ--ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTK
        W IW  R +R      +  A  V K  +  I +  ++  K+++  S+     +    W KP   F K+N D  +  E    G+G  V D  G ++ +G +
Subjt:  WNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ--ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTK

Query:  KMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGILV
        ++   WE+++ EA AI  G++  +   +++   L VESD L VI+AL  +  D SEL LI+D IL+
Subjt:  KMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGILV

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]3.8e-1028.31Show/hide
Query:  WNIWNIRRN---RTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGT
        W IWN R     R + S+       + K + ++    E S     K  +     ++  WE P  + W +N DA+W      GGIGW +    G ++  G 
Subjt:  WNIWNIRRN---RTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGT

Query:  KKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGIL
        + +     +KLLEA+AILEG++ ++N  +     L +E+D+  V   LN + +D ++   +V+ IL
Subjt:  KKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGIL

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134127.0e-1034.86Show/hide
Query:  ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQS
        A W+ P  N WK+N +AAW  +  TGGIGW + D  G +I    + +  +  I  LE  AI EG++AI     ++   + +ESD+L  I  L+ +  DQ+
Subjt:  ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQS

Query:  ELKLIVDGI
        E+  +++ I
Subjt:  ELKLIVDGI

A0A6J1CQG0 uncharacterized protein LOC1110132163.1e-1030.12Show/hide
Query:  WNIWNIRRNRTQASNSIIPAD----SVFKLIEDNI-----------KDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTV
        W IW   RNR+      I       S+   I  NI               + YL R ++     +     W  P  N WK+N DA+W +E   GGIGW +
Subjt:  WNIWNIRRNRTQASNSIIPAD----SVFKLIEDNI-----------KDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTV

Query:  HDSSGPLICIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDD
         D  G ++  G  K+  K EI  LE   I+ G++ I+   +Q+   + +ESD++ VI+ +  ED D
Subjt:  HDSSGPLICIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDD

A0A6J1DNV9 uncharacterized protein LOC1110224031.8e-1028.31Show/hide
Query:  WNIWNIRRN---RTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGT
        W IWN R     R + S+       + K + ++    E S     K  +     ++  WE P  + W +N DA+W      GGIGW +    G ++  G 
Subjt:  WNIWNIRRN---RTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGT

Query:  KKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGIL
        + +     +KLLEA+AILEG++ ++N  +     L +E+D+  V   LN + +D ++   +V+ IL
Subjt:  KKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGIL

A0A6J5UAY2 Reverse transcriptase domain-containing protein1.1e-1030.06Show/hide
Query:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ------ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLI
        +W IW I RN      ++I      +   D + ++  + +      +      +       +W KP     K+N DAAW  +   GG+GW V DS G ++
Subjt:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ------ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLI

Query:  CIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLS-LQVESDALSVIKALNGEDDDQSELKLIVDGILVD
          G K          +EA AI E + A    C+Q+GLS L+VESD+L VI+ + GE      + + VD I+ D
Subjt:  CIGTKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLS-LQVESDALSVIKALNGEDDDQSELKLIVDGILVD

A0A6J5XPQ2 RNase H domain-containing protein1.2e-0931.9Show/hide
Query:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ---ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIG
        +W IW  R +         PA++V  L++   +  E    K++ Q      AS     +W KP P F K+N DAAW  +   GG+GW + DS G L+C G
Subjt:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQ---ATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIG

Query:  TKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIV
         +   H     ++E  AI   +   S+  + N +   VESD+   I  LNG     S+L+ IV
Subjt:  TKKMNHKWEIKLLEATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-0421.95Show/hide
Query:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRN--HASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGT
        MW IW    N    +++     +  ++  ++ K+W ++ +   +Q   RN   +    W  P  +  K N DA+  +     G+GW + +S G +I  G 
Subjt:  MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRN--HASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGT

Query:  KKMNHKWEIKLLEATAILEGIKA
         K   +   +  E + ++  I+A
Subjt:  KKMNHKWEIKLLEATAILEGIKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAACATATGGAATATCAGACGAAATCGAACACAAGCATCCAACAGTATCATCCCAGCAGACTCAGTCTTCAAATTAATAGAAGATAACATCAAAGATTGGGAAAA
CTCTTACCTTAAGAGATCAAAGCAATGCAGCTTGAGGAACCATGCTAGTCAAGCTACCTGGGAGAAGCCGAAGCCGAATTTTTGGAAAATTAACCCAGACGCTGCTTGGT
TCAAAGAAGCAGGTACTGGAGGCATTGGTTGGACAGTGCATGACTCGTCTGGGCCCTTAATTTGCATTGGCACGAAGAAGATGAATCACAAATGGGAGATCAAACTTTTG
GAAGCTACAGCCATCCTGGAAGGAATCAAGGCGATTAGCAATACCTGCATTCAAAATGGGTTGTCGCTGCAAGTTGAATCAGACGCTTTGTCAGTTATCAAAGCCCTGAA
TGGTGAAGACGATGACCAGTCGGAGTTGAAGTTGATCGTCGATGGCATCCTAGTTGATCGTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAACATATGGAATATCAGACGAAATCGAACACAAGCATCCAACAGTATCATCCCAGCAGACTCAGTCTTCAAATTAATAGAAGATAACATCAAAGATTGGGAAAA
CTCTTACCTTAAGAGATCAAAGCAATGCAGCTTGAGGAACCATGCTAGTCAAGCTACCTGGGAGAAGCCGAAGCCGAATTTTTGGAAAATTAACCCAGACGCTGCTTGGT
TCAAAGAAGCAGGTACTGGAGGCATTGGTTGGACAGTGCATGACTCGTCTGGGCCCTTAATTTGCATTGGCACGAAGAAGATGAATCACAAATGGGAGATCAAACTTTTG
GAAGCTACAGCCATCCTGGAAGGAATCAAGGCGATTAGCAATACCTGCATTCAAAATGGGTTGTCGCTGCAAGTTGAATCAGACGCTTTGTCAGTTATCAAAGCCCTGAA
TGGTGAAGACGATGACCAGTCGGAGTTGAAGTTGATCGTCGATGGCATCCTAGTTGATCGTCGATGA
Protein sequenceShow/hide protein sequence
MWNIWNIRRNRTQASNSIIPADSVFKLIEDNIKDWENSYLKRSKQCSLRNHASQATWEKPKPNFWKINPDAAWFKEAGTGGIGWTVHDSSGPLICIGTKKMNHKWEIKLL
EATAILEGIKAISNTCIQNGLSLQVESDALSVIKALNGEDDDQSELKLIVDGILVDRR