; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006378 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006378
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr6:41822075..41822434
RNA-Seq ExpressionLag0006378
SyntenyLag0006378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581797.1 RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. sororia]8.3e-1275.38Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFV+L+ L+     A  LWSRIEDP+ LPV
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

KAG7018248.1 RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-1275.38Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFV+L+ L+     A  LWSRIEDP+ LPV
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

XP_008460362.1 PREDICTED: RING-H2 finger protein ATL3-like [Cucumis melo]8.3e-1273.85Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MEDEYKL QHSGDSV IELPGMVI+TAILVF LVLVFV+L+ L+     A  LWSRIEDPT LP+
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

XP_022955893.1 RING-H2 finger protein ATL3-like [Cucurbita moschata]8.3e-1275.38Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFV+L+ L+     A  LWSRIEDP+ LPV
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

XP_022980687.1 RING-H2 finger protein ATL60-like [Cucurbita maxima]2.2e-1276.92Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MED+YKL QHSGDSV+IELPGMVIVTAILVFLLVLVFV+L+ L+     A  LWSRIEDPT LPV
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

TrEMBL top hitse value%identityAlignment
A0A0A0L962 RING-type E3 ubiquitin transferase2.0e-1170.77Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MEDEYKL QHS DSV+IELPGMVI+TAILVF L+LVFV+L+ L+     A  LWSRIEDPT LP+
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

A0A1S3CCE4 RING-type E3 ubiquitin transferase4.0e-1273.85Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MEDEYKL QHSGDSV IELPGMVI+TAILVF LVLVFV+L+ L+     A  LWSRIEDPT LP+
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

A0A5A7UJD5 RING-type E3 ubiquitin transferase4.0e-1273.85Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MEDEYKL QHSGDSV IELPGMVI+TAILVF LVLVFV+L+ L+     A  LWSRIEDPT LP+
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

A0A6J1GV98 RING-type E3 ubiquitin transferase4.0e-1275.38Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFV+L+ L+     A  LWSRIEDP+ LPV
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

A0A6J1IRZ5 RING-type E3 ubiquitin transferase1.1e-1276.92Show/hide
Query:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV
        MED+YKL QHSGDSV+IELPGMVIVTAILVFLLVLVFV+L+ L+     A  LWSRIEDPT LPV
Subjt:  MEDEYKL-QHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGAGTACAAGCTTCAACATTCCGGCGACTCAGTGGCCATCGAGCTACCTGGAATGGTCATTGTGACCGCCATTTTAGTGTTCTTGTTGGTGCTCGTGTTTGT
TGTTCTTATTCTTCTCCATTTTAATGGTCATCGAGCTTCCATGTTATGGTCTCGCATTGAAGATCCCACCTCACTTCCTGTTGCCGCCGATTCGAATTCTCCGCCGTCCA
CGACCCCAATTTCGAAAGAGGCTTGGAACCCGCCGTCCTTCGACCCGACCAATTCGATTAAAGAAAAAAAGTGGCCCGACCCGACCCGACCCGACCCGAACTGTTCAAGT
CGAGTCGAGTCGGTTTGTCCGTACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGAGTACAAGCTTCAACATTCCGGCGACTCAGTGGCCATCGAGCTACCTGGAATGGTCATTGTGACCGCCATTTTAGTGTTCTTGTTGGTGCTCGTGTTTGT
TGTTCTTATTCTTCTCCATTTTAATGGTCATCGAGCTTCCATGTTATGGTCTCGCATTGAAGATCCCACCTCACTTCCTGTTGCCGCCGATTCGAATTCTCCGCCGTCCA
CGACCCCAATTTCGAAAGAGGCTTGGAACCCGCCGTCCTTCGACCCGACCAATTCGATTAAAGAAAAAAAGTGGCCCGACCCGACCCGACCCGACCCGAACTGTTCAAGT
CGAGTCGAGTCGGTTTGTCCGTACAACTGA
Protein sequenceShow/hide protein sequence
MEDEYKLQHSGDSVAIELPGMVIVTAILVFLLVLVFVVLILLHFNGHRASMLWSRIEDPTSLPVAADSNSPPSTTPISKEAWNPPSFDPTNSIKEKKWPDPTRPDPNCSS
RVESVCPYN