; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006381 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006381
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionISWI chromatin-remodeling complex ATPase CHR11
Genome locationchr6:41862485..41864402
RNA-Seq ExpressionLag0006381
SyntenyLag0006381
Gene Ontology termsGO:0016584 - nucleosome positioning (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
GO:0031491 - nucleosome binding (molecular function)
InterPro domainsIPR015194 - ISWI, HAND domain
IPR036306 - ISWI, HAND domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033470.1 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1 [Cucumis melo var. makuwa]2.6e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

XP_008458481.1 PREDICTED: ISWI chromatin-remodeling complex ATPase CHR11 isoform X1 [Cucumis melo]2.6e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

XP_022138477.1 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1 [Momordica charantia]2.6e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

XP_022138478.1 ISWI chromatin-remodeling complex ATPase CHR11 isoform X2 [Momordica charantia]2.6e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

XP_038874770.1 ISWI chromatin-remodeling complex ATPase CHR11 isoform X2 [Benincasa hispida]2.6e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

TrEMBL top hitse value%identityAlignment
A0A0A0KFJ8 Uncharacterized protein1.3e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

A0A1S3C823 ISWI chromatin-remodeling complex ATPase CHR11 isoform X11.3e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

A0A5A7SRC8 ISWI chromatin-remodeling complex ATPase CHR11 isoform X11.3e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

A0A6J1CB76 ISWI chromatin-remodeling complex ATPase CHR11 isoform X11.3e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

A0A6J1CD32 ISWI chromatin-remodeling complex ATPase CHR11 isoform X21.3e-5298.15Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDDEKDENKFDFKKIVSENWIEPPKRE+KRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TIDVEE E
Subjt:  TIDVEETE

SwissProt top hitse value%identityAlignment
F4JY24 ISWI chromatin-remodeling complex ATPase CHR176.1e-4479.82Show/hide
Query:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK
        +A+ YDFDD+ KDE+K DFKKIVSENW +PPKRE+KRNYSE EYFKQT+RQG P KPKEPRIPRMPQLHDFQFFN QRL+ELYEKEVRYLMQ HQK Q+K
Subjt:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK

Query:  DTIDVEETE
        DTI+V+E E
Subjt:  DTIDVEETE

O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 54.7e-1243.96Show/hide
Query:  AELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQT
        + +Y+F+ E    K   +KI    WIEPPKRE+K NY+   YF++ +R   P  PK PR P+ P + DFQFF   RL EL EKE+ +  +T
Subjt:  AELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQT

Q7G8Y3 Probable chromatin-remodeling complex ATPase chain2.0e-4277.78Show/hide
Query:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        TAELYDFDD+K+ENK DFKK+VS+NWIEPP+RE+KRNYSESEYFKQ +RQG P KP+EPRIPRMP LHDFQFFN QRL+ELYEKEVRYLMQ +QK   KD
Subjt:  TAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETE
        TID E+ +
Subjt:  TIDVEETE

Q8RWY3 ISWI chromatin-remodeling complex ATPase CHR112.7e-4785.32Show/hide
Query:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK
        +A+ YDFDD+ KDENK DFKKIVS+NW +PPKRE+KRNYSESEYFKQT+RQG P KPKEPRIPRMPQLHDFQFFN QRL+ELYEKEVRYLMQTHQKNQLK
Subjt:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK

Query:  DTIDVEETE
        DTIDVEE E
Subjt:  DTIDVEETE

Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 51.6e-1245.05Show/hide
Query:  AELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQT
        + +Y+F+ E    K   +KI    WIEPPKRE+K NY+   YF++ +R   P  PK PR P+ P + DFQFF   RL EL EKE+ Y  +T
Subjt:  AELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQT

Arabidopsis top hitse value%identityAlignment
AT3G06400.1 chromatin-remodeling protein 113.8e-4985.45Show/hide
Query:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK
        +A+ YDFDD+ KDENK DFKKIVS+NW +PPKRE+KRNYSESEYFKQT+RQG P KPKEPRIPRMPQLHDFQFFN QRL+ELYEKEVRYLMQTHQKNQLK
Subjt:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK

Query:  DTIDVEETEG
        DTIDVEE EG
Subjt:  DTIDVEETEG

AT3G06400.2 chromatin-remodeling protein 111.9e-4885.32Show/hide
Query:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK
        +A+ YDFDD+ KDENK DFKKIVS+NW +PPKRE+KRNYSESEYFKQT+RQG P KPKEPRIPRMPQLHDFQFFN QRL+ELYEKEVRYLMQTHQKNQLK
Subjt:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK

Query:  DTIDVEETE
        DTIDVEE E
Subjt:  DTIDVEETE

AT3G06400.3 chromatin-remodeling protein 115.0e-4986.24Show/hide
Query:  AELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD
        A+ YDFDD+ KDENK DFKKIVS+NW +PPKRE+KRNYSESEYFKQT+RQG P KPKEPRIPRMPQLHDFQFFN QRL+ELYEKEVRYLMQTHQKNQLKD
Subjt:  AELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKD

Query:  TIDVEETEG
        TIDVEE EG
Subjt:  TIDVEETEG

AT5G18620.1 chromatin remodeling factor174.4e-4579.82Show/hide
Query:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK
        +A+ YDFDD+ KDE+K DFKKIVSENW +PPKRE+KRNYSE EYFKQT+RQG P KPKEPRIPRMPQLHDFQFFN QRL+ELYEKEVRYLMQ HQK Q+K
Subjt:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK

Query:  DTIDVEETE
        DTI+V+E E
Subjt:  DTIDVEETE

AT5G18620.2 chromatin remodeling factor174.4e-4579.82Show/hide
Query:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK
        +A+ YDFDD+ KDE+K DFKKIVSENW +PPKRE+KRNYSE EYFKQT+RQG P KPKEPRIPRMPQLHDFQFFN QRL+ELYEKEVRYLMQ HQK Q+K
Subjt:  TAELYDFDDE-KDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLK

Query:  DTIDVEETE
        DTI+V+E E
Subjt:  DTIDVEETE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTTTTCGTGCTTAGATCTGAGGTCGTGGTGGTCGTAGGTCAGGAACTGAATCAGGAACCCATCACTGCTGAATTGTATGATTTTGATGATGAAAAGGATGAGAA
TAAATTTGACTTCAAGAAAATTGTTAGTGAAAATTGGATTGAACCACCTAAAAGGGAGCAGAAGCGCAATTACTCGGAATCAGAATACTTTAAGCAAACGATGCGGCAGG
GTGGTCCAACAAAACCAAAAGAGCCTAGGATTCCTCGCATGCCTCAGTTGCACGATTTCCAGTTTTTTAACACACAAAGGTTGAGTGAACTCTATGAAAAAGAAGTACGG
TATCTCATGCAAACACATCAAAAGAATCAGTTGAAGGACACAATAGATGTTGAGGAGACTGAAGGCAATGCTTTGATTATTAATTTTCCGGAGGCTGCTTCCTTTGGGCA
ATTTTTGCTGTCTTTTAAAGGACATGGTTGGAACAAGACAAGAGCCATGGTGACCAAACAGCTATGTTGTTGGATATCTTTGGTTGAAGATTGTCATCAAACATTTACAT
TGAAGCTTAGACCATTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTTTTCGTGCTTAGATCTGAGGTCGTGGTGGTCGTAGGTCAGGAACTGAATCAGGAACCCATCACTGCTGAATTGTATGATTTTGATGATGAAAAGGATGAGAA
TAAATTTGACTTCAAGAAAATTGTTAGTGAAAATTGGATTGAACCACCTAAAAGGGAGCAGAAGCGCAATTACTCGGAATCAGAATACTTTAAGCAAACGATGCGGCAGG
GTGGTCCAACAAAACCAAAAGAGCCTAGGATTCCTCGCATGCCTCAGTTGCACGATTTCCAGTTTTTTAACACACAAAGGTTGAGTGAACTCTATGAAAAAGAAGTACGG
TATCTCATGCAAACACATCAAAAGAATCAGTTGAAGGACACAATAGATGTTGAGGAGACTGAAGGCAATGCTTTGATTATTAATTTTCCGGAGGCTGCTTCCTTTGGGCA
ATTTTTGCTGTCTTTTAAAGGACATGGTTGGAACAAGACAAGAGCCATGGTGACCAAACAGCTATGTTGTTGGATATCTTTGGTTGAAGATTGTCATCAAACATTTACAT
TGAAGCTTAGACCATTGTTTTAA
Protein sequenceShow/hide protein sequence
MWFFVLRSEVVVVVGQELNQEPITAELYDFDDEKDENKFDFKKIVSENWIEPPKREQKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVR
YLMQTHQKNQLKDTIDVEETEGNALIINFPEAASFGQFLLSFKGHGWNKTRAMVTKQLCCWISLVEDCHQTFTLKLRPLF