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Lag0006400 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006400
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCytochrome c oxidase subunit
Genome locationchr6:42069792..42071881
RNA-Seq ExpressionLag0006400
SyntenyLag0006400
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153389.1 cytochrome c oxidase subunit 6b-2 [Momordica charantia]7.6e-2898.33Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

XP_022929560.1 cytochrome c oxidase subunit 6b-2 [Cucurbita moschata]2.6e-28100Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

XP_022969669.1 cytochrome c oxidase subunit 6b-2-like [Cucurbita maxima]2.6e-28100Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

XP_022997477.1 cytochrome c oxidase subunit 6b-2 [Cucurbita maxima]2.6e-28100Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

XP_038889175.1 cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida]2.6e-28100Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

TrEMBL top hitse value%identityAlignment
A0A6J1DIX3 Cytochrome c oxidase subunit3.7e-2898.33Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

A0A6J1EUQ5 Cytochrome c oxidase subunit1.3e-28100Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

A0A6J1FBN5 Cytochrome c oxidase subunit4.8e-2898.33Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

A0A6J1I3B0 Cytochrome c oxidase subunit1.3e-28100Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

A0A6J1K554 Cytochrome c oxidase subunit1.3e-28100Show/hide
Query:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Subjt:  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial3.9e-1152.83Show/hide
Query:  TAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        T   D RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   Y++LCP EW
Subjt:  TAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

P14854 Cytochrome c oxidase subunit 6B13.9e-1150.88Show/hide
Query:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTAKGEESGECERFAKYYRALCPGEW
        KTAP D RFP  NQTR+C+  Y++FHRC   +TAKG +   CE + + Y++LCP  W
Subjt:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTAKGEESGECERFAKYYRALCPGEW

Q945L0 Cytochrome c oxidase subunit 6b-22.1e-2894.83Show/hide
Query:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEW
Subjt:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

Q9S7L9 Cytochrome c oxidase subunit 6b-11.5e-2374.14Show/hide
Query:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        EI+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EW
Subjt:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

Q9SUD3 Cytochrome c oxidase subunit 6b-34.6e-2893.1Show/hide
Query:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEW
Subjt:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B1.1e-2474.14Show/hide
Query:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        EI+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EW
Subjt:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein2.0e-1041.18Show/hide
Query:  APADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGE
        A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E
Subjt:  APADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGE

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein3.3e-2993.1Show/hide
Query:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEW
Subjt:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein1.5e-2994.83Show/hide
Query:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
        EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEW
Subjt:  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAATTGAGCTGAAAACAGCACCTGCTGACTTCCGATTTCCTACAACAAATCAAACCAGGCACTGCTTCACTCGTTACATTGAGTTCCACAGGTGCCTGACAGC
AAAGGGTGAGGAGTCTGGTGAATGTGAGAGATTTGCAAAGTATTATCGTGCTCTTTGCCCTGGTGAATGGGAGAATTCTTCTTTTGATTTCTCTGCGTCCTGTGGCATCA
GATTAAATGTTTATACTAGTATCAGCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAATTGAGCTGAAAACAGCACCTGCTGACTTCCGATTTCCTACAACAAATCAAACCAGGCACTGCTTCACTCGTTACATTGAGTTCCACAGGTGCCTGACAGC
AAAGGGTGAGGAGTCTGGTGAATGTGAGAGATTTGCAAAGTATTATCGTGCTCTTTGCCCTGGTGAATGGGAGAATTCTTCTTTTGATTTCTCTGCGTCCTGTGGCATCA
GATTAAATGTTTATACTAGTATCAGCTACTGA
Protein sequenceShow/hide protein sequence
MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWENSSFDFSASCGIRLNVYTSISY