CuGenDBv2

Gene ID	Lag0006415
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	nuclear pore complex protein NUP43
Genome location	chr6:42227112..42229548
RNA-Seq Expression	Lag0006415
Synteny	Lag0006415
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

3.0e-195

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Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAV+A FDSDSDSSSIEIHS+TQ+PLD++P S WTSPSR+SSLKTSQ  QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMDASLDSELSVPEK+LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGT FAWDLRWQQQPIILSGLEGSKT+N SPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_022158135.1 nuclear pore complex protein NUP43 [Momordica charantia]

3.1e-192

95.35

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHVLSVEPM
        QQQPQIHRFP FKYVDGVRWLP LSAFGRFAVIA+FDSDSDSSSIEIHSVTQ+ LDI+PHSTW SPSRVSSLKTSQ  QNPLVFASTYTGSLHVLSVEPM
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHVLSVEPM

Query:  DASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQF
        DASLDSEL+VPEK LHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQF
Subjt:  DASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQF

Query:  KGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGILTSI
        KGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLE SK +NLSPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSEDGILTS+
Subjt:  KGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGILTSI

Query:  EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

1.4e-195

94.29

Show/hide

Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAV+A FDSDSDSSSIEIHS+TQ+PLD++P S WTSPSR+SSLKTSQ  QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMDASLDSELSVPEK+LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKT+N SPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_022969681.1 nuclear pore complex protein NUP43 [Cucurbita maxima]

1.4e-192

92.57

Show/hide

Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKY+DGVRWLPPLSAFGRFAV+A FDSDSDSSSIEIHS+TQ+PLD++P S WTSPSR+SSLKTSQ  QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMDASLDSELSVPEK+LHD PISCVDVMD GGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKT+N SPCESEVWEV YDPYIKSGNIGGMSSSQILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_023538014.1 nuclear pore complex protein NUP43 [Cucurbita pepo subsp. pepo]

1.2e-194

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Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAV+A FDSDSDSSSIEIHS+TQ+PLD++P S WTSPSRVSSLKTSQ  QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMDASLDSELSVPEK+LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAVSQFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKT+N SPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDIDRQ PSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BTA6 nuclear pore complex protein NUP43

8.3e-191

92.55

Show/hide

Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKYVDGVRWLPPLSAF RFAVIA FDSD DSSSIEIHS+TQ+PLDI+PHSTW SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEKMLHDGPISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEG+KT+N SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP43

8.3e-191

92.55

Show/hide

Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKYVDGVRWLPPLSAF RFAVIA FDSD DSSSIEIHS+TQ+PLDI+PHSTW SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEKMLHDGPISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEG+KT+N SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A6J1DUZ0 nuclear pore complex protein NUP43

1.5e-192

95.35

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHVLSVEPM
        QQQPQIHRFP FKYVDGVRWLP LSAFGRFAVIA+FDSDSDSSSIEIHSVTQ+ LDI+PHSTW SPSRVSSLKTSQ  QNPLVFASTYTGSLHVLSVEPM
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHVLSVEPM

Query:  DASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQF
        DASLDSEL+VPEK LHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQF
Subjt:  DASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQF

Query:  KGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGILTSI
        KGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLE SK +NLSPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSEDGILTS+
Subjt:  KGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGILTSI

Query:  EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1FCG9 nuclear pore complex protein NUP43

6.6e-196

94.29

Show/hide

Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAV+A FDSDSDSSSIEIHS+TQ+PLD++P S WTSPSR+SSLKTSQ  QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMDASLDSELSVPEK+LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKT+N SPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP43

6.8e-193

92.57

Show/hide

Query:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV
        MA ++ QQQPQIHRFPQFKY+DGVRWLPPLSAFGRFAV+A FDSDSDSSSIEIHS+TQ+PLD++P S WTSPSR+SSLKTSQ  QNPLVFASTYTGSLHV
Subjt:  MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHV

Query:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMDASLDSELSVPEK+LHD PISCVDVMD GGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMDASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED
        GAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKT+N SPCESEVWEV YDPYIKSGNIGGMSSSQILPAMICSED
Subjt:  GAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

4.4e-112

58.84

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLD-------ISPHSTWTSPSRVSSLKTSQL-----NQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA  RF   AS+D+D DSSSIEI S+  +P         I   S+WTSPSRVSSL+ +       +  P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLD-------ISPHSTWTSPSRVSSLKTSQL-----NQNPLVFASTY

Query:  TGSLHVLSVEPMDASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQ
        +GSLHVL ++ ++ +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y A KWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPMDASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSS
         WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSS

Query:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        S+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

3.1e-113

58.84

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLD-------ISPHSTWTSPSRVSSLKTSQL-----NQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA  RF   AS+D+D DSSSIEI S+  +P         I   S+WTSPSRVSSL+ +       +  P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLD-------ISPHSTWTSPSRVSSLKTSQL-----NQNPLVFASTY

Query:  TGSLHVLSVEPMDASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQ
        +GSLHVL ++ ++ +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y A KWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPMDASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSS
         WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSS

Query:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        S+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Sequences

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CDS sequence

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ATGGCGACCATGAATCACCAGCAGCAACCTCAGATCCACAGGTTCCCGCAATTCAAGTATGTCGATGGCGTTCGGTGGCTTCCACCGCTCTCTGCATTCGGCCGGTTTGC
CGTCATTGCCTCGTTCGACTCCGATTCCGACTCATCCTCCATTGAAATTCACTCCGTTACTCAAAGTCCGCTGGATATATCTCCTCATTCGACTTGGACATCACCTTCAA
GAGTCTCCTCCCTTAAAACCTCTCAGCTCAACCAAAACCCTCTCGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCCGTCGAGCCAATGGATGCGTCGCTC
GACTCGGAGCTCTCGGTGCCTGAGAAGATGTTGCACGACGGACCTATTTCCTGTGTGGATGTGATGGATGGTGGAGGTGAATGTCTGACTGTTGCGGAAGATGGACGGGT
GAATTTGGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTGCAGCGAAATGGGCATCGCCTACTGAGTTTGCGA
CTGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCAGTTTCTCAATTTAAGGGCGACTGGGCTTCTGGTATTGTTCACTGCATTGACATC
CATCCATCACGAAAACATACTTGTTTGGCAGGAGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCAATCATTCTTTCGGGTCTAGAAGGGAG
CAAAACAGCAAATCTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACATAGGTGGCATGTCATCTTCGCAGATCTTACCTG
CTATGATCTGCTCTGAGGACGGGATTTTAACTAGTATTGAGCAAGGCAAGCAGCCTGTGGAACTGCTGGCAGAACCGTGTGCAATTAATGGCTTTGACATTGACCGTCAA
CACCCATCAGAAGTGATATGTAATTTGGAGTGGGAATCCGTGGCCATCCTATCAAGACCATGA

mRNA sequence

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Protein sequence

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MATMNHQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVIASFDSDSDSSSIEIHSVTQSPLDISPHSTWTSPSRVSSLKTSQLNQNPLVFASTYTGSLHVLSVEPMDASL
DSELSVPEKMLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDI
HPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTANLSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQ
HPSEVICNLEWESVAILSRP

Lag0006415 (gene) of Sponge gourd (AG-4) v1 genome