; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006424 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006424
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase
Genome locationchr6:42327666..42331168
RNA-Seq ExpressionLag0006424
SyntenyLag0006424
Gene Ontology termsGO:0006390 - mitochondrial transcription (biological process)
GO:0034245 - mitochondrial DNA-directed RNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR002092 - DNA-directed RNA polymerase, phage-type
IPR029262 - DNA-directed RNA polymerase, N-terminal
IPR037159 - DNA-directed RNA polymerase, N-terminal domain superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056119.1 DNA-directed RNA polymerase 3 [Cucumis melo var. makuwa]3.1e-23291.29Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MT+TASFFPTLQAPI+G NAW+KPTKR   ERKT  SFTSTF    NS +SSVSFP+NFDSTS+  HLQPLADSV ENFTETLD+SMNLQIP SEIHQIT
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        RGES QRIFIQDPPWIASLFLKGLYK VQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLMVAQQD CVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPAD +CL KEKEVLRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPAFWH FKPVAKTPGQ  VK YGVIECDPIVLAGLD+T
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKHMLIPY+PMLVPPKKWKGYDKGGH FLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

XP_022158151.1 DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Momordica charantia]8.5e-23893.46Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MTSTASFFPTLQAPIYGGNAWRKPTKRCN ER+THLSFTSTFNSLSNSP+SSVSFP N DST+E V LQPLADSVQENFTETLD+SMNLQ+P       T
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        R ESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEF EIEKRKYNLLRRRQIKAETEAWE+MVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQ TQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTK+PADAQCL KEKE+LRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSAD PPDIRPAFWHRFKPV KTPGQKIVK YGVIECDPIVLAGLDRT
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKH+LIPY+PMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

XP_022158152.1 DNA-directed RNA polymerase 3, chloroplastic isoform X2 [Momordica charantia]8.5e-23893.46Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MTSTASFFPTLQAPIYGGNAWRKPTKRCN ER+THLSFTSTFNSLSNSP+SSVSFP N DST+E V LQPLADSVQENFTETLD+SMNLQ+P       T
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        R ESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEF EIEKRKYNLLRRRQIKAETEAWE+MVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQ TQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTK+PADAQCL KEKE+LRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSAD PPDIRPAFWHRFKPV KTPGQKIVK YGVIECDPIVLAGLDRT
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKH+LIPY+PMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

XP_031736913.1 DNA-directed RNA polymerase 3, chloroplastic isoform X2 [Cucumis sativus]4.1e-23290.85Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MT+TASFFPTLQAPI+G NAW+KPTKR   ERKTH SFTSTF    NSP+SSVSFP+NFDSTS+S+HLQPLADSV ENFTETLD+SMNLQIP+SEIHQIT
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        RGES +RIFIQDPPWIASLFLKGLYK VQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVK LFLGWFEPLK AI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        E+EQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM+A QDGCVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV AD +CL KEKEVLRK+
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWH FKPVAKTPGQ  VK YGV+ECDPIVLAGLDRT
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKHMLIPY+PMLVPPKKWKGYDKGGH FLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

XP_038889744.1 DNA-directed RNA polymerase 3, chloroplastic [Benincasa hispida]1.0e-24394.55Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MT+ ASFFPTLQAPI+GGNAW+KPTKRC  ERKTHLSF STFNSLSNSP+SSVSFP+NFDSTSE V LQPLADSVQENFTETLD SMNLQIPMSE+ QIT
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        RGES QRIFIQDPPWIASLFLKGLYKSVQKEVKLE+MEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFL+KARSNQRTKVPAD +CL KEKEVLRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQ IVKNYGVIECDPIVLAGLDRT
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKHMLIPY+PMLVPP+KWKGYDKGGH FLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

TrEMBL top hitse value%identityAlignment
A0A0A0LH38 DNA-directed RNA polymerase2.0e-23290.85Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MT+TASFFPTLQAPI+G NAW+KPTKR   ERKTH SFTSTF    NSP+SSVSFP+NFDSTS+S+HLQPLADSV ENFTETLD+SMNLQIP+SEIHQIT
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        RGES +RIFIQDPPWIASLFLKGLYK VQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVK LFLGWFEPLK AI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        E+EQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM+A QDGCVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV AD +CL KEKEVLRK+
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWH FKPVAKTPGQ  VK YGV+ECDPIVLAGLDRT
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKHMLIPY+PMLVPPKKWKGYDKGGH FLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

A0A1S3BU26 DNA-directed RNA polymerase3.7e-23190.85Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MT+TASFFPTLQAPI+G NAW+KPTKR   ERKT  SFTSTF    NS +SSVSFP+NFDSTS+  HLQPLADSV ENFTETLD+SMNLQIP SEIHQIT
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        R ES QRIFIQDPPWIASLFLKGLYK VQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLMVAQQD CVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPAD +CL KEKEVLRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNG IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPAFWH FKPVAKTPGQ  VK YGVIECDPIVLAGLD+T
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKHMLIPY+PMLVPPKKWKGYDKGGH FLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

A0A5D3BDV2 DNA-directed RNA polymerase1.5e-23291.29Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MT+TASFFPTLQAPI+G NAW+KPTKR   ERKT  SFTSTF    NS +SSVSFP+NFDSTS+  HLQPLADSV ENFTETLD+SMNLQIP SEIHQIT
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        RGES QRIFIQDPPWIASLFLKGLYK VQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLMVAQQD CVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPAD +CL KEKEVLRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPAFWH FKPVAKTPGQ  VK YGVIECDPIVLAGLD+T
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKHMLIPY+PMLVPPKKWKGYDKGGH FLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

A0A6J1DWG5 DNA-directed RNA polymerase4.1e-23893.46Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MTSTASFFPTLQAPIYGGNAWRKPTKRCN ER+THLSFTSTFNSLSNSP+SSVSFP N DST+E V LQPLADSVQENFTETLD+SMNLQ+P       T
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        R ESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEF EIEKRKYNLLRRRQIKAETEAWE+MVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQ TQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTK+PADAQCL KEKE+LRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSAD PPDIRPAFWHRFKPV KTPGQKIVK YGVIECDPIVLAGLDRT
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKH+LIPY+PMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

A0A6J1E061 DNA-directed RNA polymerase4.1e-23893.46Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        MTSTASFFPTLQAPIYGGNAWRKPTKRCN ER+THLSFTSTFNSLSNSP+SSVSFP N DST+E V LQPLADSVQENFTETLD+SMNLQ+P       T
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
        R ESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEF EIEKRKYNLLRRRQIKAETEAWE+MVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI
Subjt:  RGESCQRIFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI

Query:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR
        EKEQ TQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTK+PADAQCL KEKE+LRKR
Subjt:  EKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKR

Query:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT
        VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSAD PPDIRPAFWHRFKPV KTPGQKIVK YGVIECDPIVLAGLDRT
Subjt:  VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT

Query:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        AKH+LIPY+PMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMK+ISGKQMQKVFE
Subjt:  AKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

SwissProt top hitse value%identityAlignment
O24600 DNA-directed RNA polymerase 3, chloroplastic2.4e-13458.37Show/hide
Query:  WRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQ------ENFTETLDSSMNLQIPMSEI-----HQITRG--ESCQR
        W KP       R+  L F        + PIS+ S   +  STS SVH +P+++SV       E+F E  DSS    I  + +     + + R      +R
Subjt:  WRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQ------ENFTETLDSSMNLQIPMSEI-----HQITRG--ESCQR

Query:  IFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQ
        +F+QDPPWI++LFLKGL K V + +K+E  +I+KRK++ LRRRQ+K ETEAWE+MV+EY++LE+EMCEK LAPNLPYVK +FLGWF+PLK  IE+EQK Q
Subjt:  IFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQ

Query:  --RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKRVNGLI
          +SKK +AA+APHIELL ADKMAVIVM+KMMGL+M   +DGC+QVVQAAV IG AIEQEVRI +FL++ R N       D+Q   KEK++LRKRVN LI
Subjt:  --RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKRVNGLI

Query:  RRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHML
        RR+R+ +  K++K E  K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF HRFK V K PG K+V+ YGVIECD ++LAGLD++AKHML
Subjt:  RRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHML

Query:  IPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        IPYVPMLVPPK+WKGYDKGG+LFLPSY+MRTHGS +QQDA+K IS K   +VFE
Subjt:  IPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

P69242 DNA-directed RNA polymerase 3, chloroplastic5.9e-13356.81Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLS-NSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQI
        M STAS+ P+        + WR  T++       ++     F  LS +S + + SFP    +    V   P+ +++Q   T  + +  NL+  +  + +I
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLS-NSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQI

Query:  TRG----ESCQRIFIQDPPWIASLFLKGLY---KSVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLG
          G    ES +R+FIQDPPW++SLF+  L+   K VQ  V+ EF EIE +R+Y +LRRRQIKAETEAWE+MVEEY+ELEREMCEKKLAPNLPYVK L LG
Subjt:  TRG----ESCQRIFIQDPPWIASLFLKGLY---KSVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLG

Query:  WFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMV-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQ-C
        WFEPL+QAIEKEQ  + + K +AAFAPHI+ L ADKMAVIVM+K+MGLLM+  +++ CVQVVQAAVQIG A+E EVRI +FLEK +  Q+    A +Q  
Subjt:  WFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMV-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQ-C

Query:  LDKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIEC
        + +E  +LRKRV  LI+R R+ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+A++QPPV QSAD+PPDIRPAF H F+   + PG+ IVK YGVIEC
Subjt:  LDKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIEC

Query:  DPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        DP+V+AG+DRT K M+IPYVPMLVPPKKW+GYDKGG+LFLPSY+MRTHGS RQQDA++S+  KQMQ+V+E
Subjt:  DPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

P69243 DNA-directed RNA polymerase 3A, chloroplastic5.9e-13356.81Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLS-NSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQI
        M STAS+ P+        + WR  T++       ++     F  LS +S + + SFP    +    V   P+ +++Q   T  + +  NL+  +  + +I
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLS-NSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQI

Query:  TRG----ESCQRIFIQDPPWIASLFLKGLY---KSVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLG
          G    ES +R+FIQDPPW++SLF+  L+   K VQ  V+ EF EIE +R+Y +LRRRQIKAETEAWE+MVEEY+ELEREMCEKKLAPNLPYVK L LG
Subjt:  TRG----ESCQRIFIQDPPWIASLFLKGLY---KSVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLG

Query:  WFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMV-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQ-C
        WFEPL+QAIEKEQ  + + K +AAFAPHI+ L ADKMAVIVM+K+MGLLM+  +++ CVQVVQAAVQIG A+E EVRI +FLEK +  Q+    A +Q  
Subjt:  WFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMV-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQ-C

Query:  LDKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIEC
        + +E  +LRKRV  LI+R R+ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+A++QPPV QSAD+PPDIRPAF H F+   + PG+ IVK YGVIEC
Subjt:  LDKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIEC

Query:  DPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        DP+V+AG+DRT K M+IPYVPMLVPPKKW+GYDKGG+LFLPSY+MRTHGS RQQDA++S+  KQMQ+V+E
Subjt:  DPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

Q8L6J1 DNA-directed RNA polymerase 3B, chloroplastic1.9e-13156.72Show/hide
Query:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT
        M STAS+ P+        + WR  T++       ++     F  LS S   S S   +F  T +   +    +++Q   T  + +  NL+  +  + +I 
Subjt:  MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQIT

Query:  RG----ESCQRIFIQDPPWIASLFLKGLY---KSVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGW
         G    ES +R+FIQDPPW++SLF+  L+   K VQ  V+ EF EIE +R+Y +LRRRQIKAETEAWE+MVEEY+ELEREMCEKKLAPNLPYVK L LGW
Subjt:  RG----ESCQRIFIQDPPWIASLFLKGLY---KSVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGW

Query:  FEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMV-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQ-CL
        FEPL+QAIEKEQ  + + K +AAFAPHI+ L ADKMAVIVM+K+MGLLM+  +++ CVQVVQAAVQIG A+E EVRI +FLEK +  Q+    A +Q  +
Subjt:  FEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMV-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQ-CL

Query:  DKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECD
         KE  +LRKRV  LI+R R+ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+A++Q PV QSAD+PPDIRPAF H FK   + PG+ IVK YGVIECD
Subjt:  DKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECD

Query:  PIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        P+V+AG+DRT K M+IPYVPMLVPPKKW+GYDKGG+LFLPSY+MRTHGS RQQDA++ +  KQMQ+V+E
Subjt:  PIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

Q8L6J3 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial5.4e-9455.45Show/hide
Query:  RKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM
        RKY  L+RRQ+K ETEAWE+  +EYKEL  +MCE+KLAPNLPYVK+LFLGWFEPL+  I +EQ+     K KAA+A ++  L AD MAVI M+K+MGLLM
Subjt:  RKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM

Query:  VAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSN--QRTKVPADAQCLDKEKEVLRKRVNGLIRRRRLKEVQKLLKK-EEFKAWGRDTQAKLGSRLI
             G  +VVQAA+ IG AIEQEVRI +FLEK +    ++ K   D + + +E+E LRK+V  L+++++L+ V +++++ ++ K WG+D +AK+GSRLI
Subjt:  VAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSN--QRTKVPADAQCLDKEKEVLRKRVNGLIRRRRLKEVQKLLKK-EEFKAWGRDTQAKLGSRLI

Query:  ELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHG
        ELL+++A+IQPP +Q A  PPDIRPAF H  + VAK   +   + YG+I+CD +V  GL+RTA+HM+IPY+PMLVPP KW GYDKGGHL+LPSYVMRTHG
Subjt:  ELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHG

Query:  SSRQQDAMKSISGKQMQKVFE
        + +Q++A+K  S  Q+Q VFE
Subjt:  SSRQQDAMKSISGKQMQKVFE

Arabidopsis top hitse value%identityAlignment
AT1G68990.1 male gametophyte defective 33.8e-8750.76Show/hide
Query:  RKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM
        +K+ +L++RQ+K ETE WE+   E +E+  +MCE+KLAPNLPY+K+LFLGWFEP++ AI+ +  T + KK K  +AP +E L ADKMAVI M+KMMGLLM
Subjt:  RKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM

Query:  V-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQC-------LDKEKEVLRKRVNGLIRRRRLKEVQKLLKK-EEFKAWGRDTQAK
          A+  G V++V AA QIG A+EQEVRI SFL+K      T    + +        + KE E  RK+V  L+ + +L++V+ L++K + FK WG++ Q K
Subjt:  V-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQC-------LDKEKEVLRKRVNGLIRRRRLKEVQKLLKK-EEFKAWGRDTQAK

Query:  LGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSY
        +G+RLI+LL+E+A+IQPP  Q  D PPDIRPAF   F+ V      K  + YG IECDP+VL GLD++A+HM+IPY+PML+PP+ W GYD+G H FLPSY
Subjt:  LGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSY

Query:  VMRTHGSSRQQDAMKSISGKQMQKVFE
        VMRTHG+ +Q+  MK    +Q++ V+E
Subjt:  VMRTHGSSRQQDAMKSISGKQMQKVFE

AT1G68990.2 male gametophyte defective 34.7e-8549.7Show/hide
Query:  RKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM
        +K+ +L++RQ+K ETE WE+   E +E+  +MCE+KLAPNLPY+K+LFLGWFEP++ AI+ +  T + KK K  +AP +E L ADKMAVI M+KMMGLLM
Subjt:  RKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLM

Query:  V-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQC-------LDKEKEVLRKRVNGLIRRRRLKEVQKLLKK-EEFKAWGRDTQAK
          A+  G V++V AA QIG A+EQEVRI SFL+K      T    + +        + KE E  RK+V  L+ + +L++V+ L++K + FK WG++ Q K
Subjt:  V-AQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQC-------LDKEKEVLRKRVNGLIRRRRLKEVQKLLKK-EEFKAWGRDTQAK

Query:  LGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT-------AKHMLIPYVPMLVPPKKWKGYDKGG
        +G+RLI+LL+E+A+IQPP  Q  D PPDIRPAF   F+ V      K  + YG IECDP+VL GLD++       A+HM+IPY+PML+PP+ W GYD+G 
Subjt:  LGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRT-------AKHMLIPYVPMLVPPKKWKGYDKGG

Query:  HLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        H FLPSYVMRTHG+ +Q+  MK    +Q++ V+E
Subjt:  HLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

AT2G24120.1 DNA/RNA polymerases superfamily protein1.7e-13558.37Show/hide
Query:  WRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQ------ENFTETLDSSMNLQIPMSEI-----HQITRG--ESCQR
        W KP       R+  L F        + PIS+ S   +  STS SVH +P+++SV       E+F E  DSS    I  + +     + + R      +R
Subjt:  WRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQ------ENFTETLDSSMNLQIPMSEI-----HQITRG--ESCQR

Query:  IFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQ
        +F+QDPPWI++LFLKGL K V + +K+E  +I+KRK++ LRRRQ+K ETEAWE+MV+EY++LE+EMCEK LAPNLPYVK +FLGWF+PLK  IE+EQK Q
Subjt:  IFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQ

Query:  --RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKRVNGLI
          +SKK +AA+APHIELL ADKMAVIVM+KMMGL+M   +DGC+QVVQAAV IG AIEQEVRI +FL++ R N       D+Q   KEK++LRKRVN LI
Subjt:  --RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKRVNGLI

Query:  RRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHML
        RR+R+ +  K++K E  K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF HRFK V K PG K+V+ YGVIECD ++LAGLD++AKHML
Subjt:  RRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHML

Query:  IPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        IPYVPMLVPPK+WKGYDKGG+LFLPSY+MRTHGS +QQDA+K IS K   +VFE
Subjt:  IPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

AT2G24120.2 DNA/RNA polymerases superfamily protein1.7e-13558.37Show/hide
Query:  WRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQ------ENFTETLDSSMNLQIPMSEI-----HQITRG--ESCQR
        W KP       R+  L F        + PIS+ S   +  STS SVH +P+++SV       E+F E  DSS    I  + +     + + R      +R
Subjt:  WRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQ------ENFTETLDSSMNLQIPMSEI-----HQITRG--ESCQR

Query:  IFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQ
        +F+QDPPWI++LFLKGL K V + +K+E  +I+KRK++ LRRRQ+K ETEAWE+MV+EY++LE+EMCEK LAPNLPYVK +FLGWF+PLK  IE+EQK Q
Subjt:  IFIQDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQ

Query:  --RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKRVNGLI
          +SKK +AA+APHIELL ADKMAVIVM+KMMGL+M   +DGC+QVVQAAV IG AIEQEVRI +FL++ R N       D+Q   KEK++LRKRVN LI
Subjt:  --RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKRVNGLI

Query:  RRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHML
        RR+R+ +  K++K E  K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF HRFK V K PG K+V+ YGVIECD ++LAGLD++AKHML
Subjt:  RRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHML

Query:  IPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE
        IPYVPMLVPPK+WKGYDKGG+LFLPSY+MRTHGS +QQDA+K IS K   +VFE
Subjt:  IPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSSRQQDAMKSISGKQMQKVFE

AT5G15700.1 DNA/RNA polymerases superfamily protein8.8e-8450.62Show/hide
Query:  KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL
        + K+  L RRQ+K ETE WE+   EY EL  +MCE+KLAPNLPYVK+LFLGWFEPL+ AI K+Q+  R  K KA +A +++ L ADK++VI M+K+MG L
Subjt:  KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL

Query:  MVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVP--ADAQCLDKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEF-KAWGRDTQAKLGSRL
        M    +GCV+VV AA  +G AIEQE+RI +FL+K +     +     + +   KE++ LRK+VN LI++++L  V+K+L+  ++ K W  D +AK+GSRL
Subjt:  MVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVP--ADAQCLDKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEF-KAWGRDTQAKLGSRL

Query:  IELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTH
        IELL+ +A+IQ P  Q  +  PD+RPAF H FK VAK       + YGVIECDP+V  GL+++ ++ ++PY+PMLVPP KW GYDKG +LFL SY+M+TH
Subjt:  IELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTH

Query:  GSSRQQDAMKSISGKQMQKVFE
        G+ +Q++A+KS    Q+Q VFE
Subjt:  GSSRQQDAMKSISGKQMQKVFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCGACAGCTTCCTTCTTCCCAACTCTCCAAGCTCCGATTTATGGCGGCAATGCATGGAGGAAACCCACCAAAAGATGCAACTCCGAAAGAAAAACCCATTTATC
ATTCACCTCAACCTTCAATTCTCTCTCTAATTCCCCCATTTCTTCCGTTTCTTTCCCCTTAAACTTCGATTCCACTTCCGAATCAGTCCATCTTCAACCTCTAGCTGACT
CAGTTCAGGAGAATTTCACAGAAACCCTCGATAGTTCGATGAATTTGCAGATACCCATGAGCGAAATTCACCAGATAACTCGAGGGGAATCTTGCCAAAGAATCTTCATT
CAGGATCCGCCATGGATAGCTTCCTTGTTCCTGAAGGGGCTGTACAAAAGCGTGCAGAAGGAAGTTAAGTTAGAATTTATGGAAATTGAGAAGAGGAAGTATAATTTGCT
GAGGAGGAGGCAGATTAAGGCGGAGACTGAGGCCTGGGAGAAGATGGTTGAGGAGTATAAGGAATTAGAGAGAGAAATGTGTGAGAAGAAGTTAGCTCCGAATTTGCCTT
ATGTGAAGACGTTGTTCTTGGGGTGGTTTGAGCCATTGAAGCAGGCTATAGAGAAGGAGCAAAAGACGCAGAGGAGTAAGAAGCAGAAGGCGGCATTTGCGCCTCATATA
GAGTTATTGTCTGCAGATAAGATGGCGGTTATTGTGATGTACAAGATGATGGGATTGTTGATGGTGGCGCAGCAGGATGGCTGTGTTCAGGTCGTCCAGGCTGCGGTTCA
GATTGGTGGTGCTATAGAGCAGGAGGTTAGAATTCAGAGCTTTTTGGAGAAGGCTAGGAGTAATCAGAGAACAAAGGTTCCAGCTGATGCTCAGTGTTTGGACAAGGAGA
AAGAAGTATTGAGGAAACGAGTTAATGGTCTAATTAGGAGAAGGAGACTGAAAGAGGTGCAAAAATTGTTGAAAAAAGAAGAATTTAAGGCTTGGGGTCGAGACACTCAG
GCTAAGCTAGGAAGTCGTCTCATAGAATTGTTAATTGAATCAGCTTTCATCCAACCTCCAGTTAGCCAGTCAGCTGACAGTCCACCTGATATTCGACCTGCATTTTGGCA
TAGGTTTAAACCTGTTGCAAAAACTCCAGGGCAGAAAATTGTGAAGAATTATGGAGTTATTGAATGTGATCCCATAGTTCTCGCTGGACTTGACAGAACTGCCAAGCATA
TGTTAATTCCTTACGTCCCTATGTTGGTTCCTCCTAAAAAATGGAAGGGGTATGATAAAGGTGGACATTTATTCTTACCTTCATATGTCATGCGTACTCATGGATCAAGT
AGGCAACAAGATGCCATGAAGAGCATTTCTGGGAAACAGATGCAGAAAGTATTTGAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCGACAGCTTCCTTCTTCCCAACTCTCCAAGCTCCGATTTATGGCGGCAATGCATGGAGGAAACCCACCAAAAGATGCAACTCCGAAAGAAAAACCCATTTATC
ATTCACCTCAACCTTCAATTCTCTCTCTAATTCCCCCATTTCTTCCGTTTCTTTCCCCTTAAACTTCGATTCCACTTCCGAATCAGTCCATCTTCAACCTCTAGCTGACT
CAGTTCAGGAGAATTTCACAGAAACCCTCGATAGTTCGATGAATTTGCAGATACCCATGAGCGAAATTCACCAGATAACTCGAGGGGAATCTTGCCAAAGAATCTTCATT
CAGGATCCGCCATGGATAGCTTCCTTGTTCCTGAAGGGGCTGTACAAAAGCGTGCAGAAGGAAGTTAAGTTAGAATTTATGGAAATTGAGAAGAGGAAGTATAATTTGCT
GAGGAGGAGGCAGATTAAGGCGGAGACTGAGGCCTGGGAGAAGATGGTTGAGGAGTATAAGGAATTAGAGAGAGAAATGTGTGAGAAGAAGTTAGCTCCGAATTTGCCTT
ATGTGAAGACGTTGTTCTTGGGGTGGTTTGAGCCATTGAAGCAGGCTATAGAGAAGGAGCAAAAGACGCAGAGGAGTAAGAAGCAGAAGGCGGCATTTGCGCCTCATATA
GAGTTATTGTCTGCAGATAAGATGGCGGTTATTGTGATGTACAAGATGATGGGATTGTTGATGGTGGCGCAGCAGGATGGCTGTGTTCAGGTCGTCCAGGCTGCGGTTCA
GATTGGTGGTGCTATAGAGCAGGAGGTTAGAATTCAGAGCTTTTTGGAGAAGGCTAGGAGTAATCAGAGAACAAAGGTTCCAGCTGATGCTCAGTGTTTGGACAAGGAGA
AAGAAGTATTGAGGAAACGAGTTAATGGTCTAATTAGGAGAAGGAGACTGAAAGAGGTGCAAAAATTGTTGAAAAAAGAAGAATTTAAGGCTTGGGGTCGAGACACTCAG
GCTAAGCTAGGAAGTCGTCTCATAGAATTGTTAATTGAATCAGCTTTCATCCAACCTCCAGTTAGCCAGTCAGCTGACAGTCCACCTGATATTCGACCTGCATTTTGGCA
TAGGTTTAAACCTGTTGCAAAAACTCCAGGGCAGAAAATTGTGAAGAATTATGGAGTTATTGAATGTGATCCCATAGTTCTCGCTGGACTTGACAGAACTGCCAAGCATA
TGTTAATTCCTTACGTCCCTATGTTGGTTCCTCCTAAAAAATGGAAGGGGTATGATAAAGGTGGACATTTATTCTTACCTTCATATGTCATGCGTACTCATGGATCAAGT
AGGCAACAAGATGCCATGAAGAGCATTTCTGGGAAACAGATGCAGAAAGTATTTGAGGTTTGA
Protein sequenceShow/hide protein sequence
MTSTASFFPTLQAPIYGGNAWRKPTKRCNSERKTHLSFTSTFNSLSNSPISSVSFPLNFDSTSESVHLQPLADSVQENFTETLDSSMNLQIPMSEIHQITRGESCQRIFI
QDPPWIASLFLKGLYKSVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHI
ELLSADKMAVIVMYKMMGLLMVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADAQCLDKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQ
AKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHRFKPVAKTPGQKIVKNYGVIECDPIVLAGLDRTAKHMLIPYVPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSS
RQQDAMKSISGKQMQKVFEV