; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006426 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006426
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationchr6:42344601..42347462
RNA-Seq ExpressionLag0006426
SyntenyLag0006426
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056118.1 Ubiquitin [Cucumis melo var. makuwa]1.4e-4392.08Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN

Query:  W
        W
Subjt:  W

KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-4492.23Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI+IV  NDFY SR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]1.3e-4492.23Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_022937980.1 uncharacterized protein LOC111444204 [Cucurbita moschata]7.5e-4593.2Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIV  NDFY SR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]4.0e-4694.17Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDN+FEEIDI+QPNDFY SRDAD+
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X16.2e-4592.23Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A5A7UM04 Ubiquitin6.9e-4492.08Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFY SRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADSGN

Query:  W
        W
Subjt:  W

A0A6J1DV27 uncharacterized protein LOC111024713 isoform X11.2e-4390.29Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTL+IKQKL TLI+QP+VDQRLILVGSGEVLED+KTLADQKVENDAVVALTLRKDDNEFEEI+IV+P++FY SRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A6J1FIC7 uncharacterized protein LOC1114442043.6e-4593.2Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIV  NDFY SR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A6J1HY58 uncharacterized protein LOC1114685513.6e-4593.2Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLE+LI+QP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIV  NDFY SR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDFYPSRDADS

Query:  GNW
        GNW
Subjt:  GNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53930.1 Ubiquitin-like superfamily protein5.3e-0440.74Show/hide
Query:  RHMAMYIRIK----RHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR
        RH  M+I IK    R        CD IE   NIK K++     PV  QRLI    G+ LED  TLAD  ++ND+++ L  R
Subjt:  RHMAMYIRIK----RHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR

AT5G57860.1 Ubiquitin-like superfamily protein1.4e-3376.09Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL  LIEQPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I QP DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF

AT5G57860.2 Ubiquitin-like superfamily protein1.4e-3376.09Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL  LIEQPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I QP DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF

AT5G57860.3 Ubiquitin-like superfamily protein1.4e-3376.09Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL  LIEQPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I QP DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVQPNDF

AT5G57860.4 Ubiquitin-like superfamily protein5.2e-2072.73Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVEN
        MAMYIR+KR KTTYFIQCDP ET L++KQKL  LIEQPV +QRL+L+ + EVLEDSK+LADQKV +
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCTTCTGGTAGCGCTTCTAAGAGGCCCCGCGATTTCTCGGTGGACAGGACTCGCCTCGACAAAGAGTATATCGATGCCGTGGCTGAGTTCCTGGAAACCTG
CGGTGTGCCTAATGCCCATTTCCTTGAGGCTAACTACCTCAGTAGTGGGTATACTGCAAAGACCTTCGCCTCTCGGCTTAGGGTCTTCCAGCCTTACCAGACGCCTGAGC
AGGTCGATGCTGTTTTCAGCATCGGCATTAGAGACCGGTCCTTCGTCTCTTCGCGGACCATCACTCGGAATCAGTTCTATGATTTCCTAGACTATCTTCGCTCAGACCCT
GGGAAGGCTGCCCTCCGGGATATGCATGTCCTGGAAAAGCTTCAAAGGAAGTGGGGGCCTTCCTTTACTGCTGAGGAGATCGGATTGCTGGCCATCAATGATGTCCAGAA
GGCCGATTATGCCAAATCCCGTGTCGAGGCGGTCCTGAGTCTCGACAAAGATATCGCGGCTGCCCGGGCTGCCCTCGCCGTAGCTGAGCGGGCTAAGGATGCCAAGCTCG
AGGAGCTGCGGTTGGCCTTCTCCCCTGCAACCACCATCCCCGACGTTGACAACCGGACCCTAACTCGGCTAAGTTGGGAGGCTTATATCTCCCGATGTCGCGAGGATAAG
GTCCAGCCTTTGGCTATGTCAACAAAGAGTGTTCTTGAGGCTGTGGACACTTTTGGTGGCGATGTTCGCAAGCGCCATATGGCCATGTATATCCGAATCAAGCGCCATAA
GACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAAACCCTTATTGAACAACCAGTAGTTGATCAGCGCTTGATTCTGGTGG
GGAGTGGGGAAGTATTGGAGGATTCAAAGACACTAGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACATTGCGAAAAGATGATAATGAGTTCGAGGAGATC
GACATTGTCCAGCCAAACGATTTCTACCCATCTCGTGATGCCGATTCTGGCAATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGCTTCTGGTAGCGCTTCTAAGAGGCCCCGCGATTTCTCGGTGGACAGGACTCGCCTCGACAAAGAGTATATCGATGCCGTGGCTGAGTTCCTGGAAACCTG
CGGTGTGCCTAATGCCCATTTCCTTGAGGCTAACTACCTCAGTAGTGGGTATACTGCAAAGACCTTCGCCTCTCGGCTTAGGGTCTTCCAGCCTTACCAGACGCCTGAGC
AGGTCGATGCTGTTTTCAGCATCGGCATTAGAGACCGGTCCTTCGTCTCTTCGCGGACCATCACTCGGAATCAGTTCTATGATTTCCTAGACTATCTTCGCTCAGACCCT
GGGAAGGCTGCCCTCCGGGATATGCATGTCCTGGAAAAGCTTCAAAGGAAGTGGGGGCCTTCCTTTACTGCTGAGGAGATCGGATTGCTGGCCATCAATGATGTCCAGAA
GGCCGATTATGCCAAATCCCGTGTCGAGGCGGTCCTGAGTCTCGACAAAGATATCGCGGCTGCCCGGGCTGCCCTCGCCGTAGCTGAGCGGGCTAAGGATGCCAAGCTCG
AGGAGCTGCGGTTGGCCTTCTCCCCTGCAACCACCATCCCCGACGTTGACAACCGGACCCTAACTCGGCTAAGTTGGGAGGCTTATATCTCCCGATGTCGCGAGGATAAG
GTCCAGCCTTTGGCTATGTCAACAAAGAGTGTTCTTGAGGCTGTGGACACTTTTGGTGGCGATGTTCGCAAGCGCCATATGGCCATGTATATCCGAATCAAGCGCCATAA
GACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAAACCCTTATTGAACAACCAGTAGTTGATCAGCGCTTGATTCTGGTGG
GGAGTGGGGAAGTATTGGAGGATTCAAAGACACTAGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACATTGCGAAAAGATGATAATGAGTTCGAGGAGATC
GACATTGTCCAGCCAAACGATTTCTACCCATCTCGTGATGCCGATTCTGGCAATTGGTAA
Protein sequenceShow/hide protein sequence
MAAASGSASKRPRDFSVDRTRLDKEYIDAVAEFLETCGVPNAHFLEANYLSSGYTAKTFASRLRVFQPYQTPEQVDAVFSIGIRDRSFVSSRTITRNQFYDFLDYLRSDP
GKAALRDMHVLEKLQRKWGPSFTAEEIGLLAINDVQKADYAKSRVEAVLSLDKDIAAARAALAVAERAKDAKLEELRLAFSPATTIPDVDNRTLTRLSWEAYISRCREDK
VQPLAMSTKSVLEAVDTFGGDVRKRHMAMYIRIKRHKTTYFIQCDPIETTLNIKQKLETLIEQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI
DIVQPNDFYPSRDADSGNW