; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006431 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006431
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranslation initiation factor IF-3
Genome locationchr6:42409960..42413590
RNA-Seq ExpressionLag0006431
SyntenyLag0006431
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]3.0e-12484.28Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTT----SAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPAD
        MAGL+  F FK LLSQSSA  TT    SAA   +S+++ TP RTS  SLP+SSS SNAF+FRLHKSNSLRL+F    SSPIR++VFAR GGAPRSSGP D
Subjt:  MAGLTSRFTFKPLLSQSSATTTT----SAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPAD

Query:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D++GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SP+ADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        DQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSASV
Subjt:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]5.5e-12686.87Show/hide
Query:  MAGLTSRFTFKPLLSQSS-ATTTTSAAASSSSATAATPLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPADSK
        MAGL+  F FK LLSQSS A+TTTS AA+ +S+++ TP RTS  SLP+SSS  SNAF+ RLHKSNSLRLVF    SSPIR++VFAR GGAPRSSGP DSK
Subjt:  MAGLTSRFTFKPLLSQSS-ATTTTSAAASSSSATAATPLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPADSK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSP+ADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSA V
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]8.5e-13591.75Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDDL
        MAGLTSRF FKPLLSQSSATT+++AA+SSSSA AA P RTSIS LPLSSS+SNAF FRLH SNSLRL+ SSPIR +VFAR+GGAPRSSGPADSKRSDDD 
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDDL

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSP+ADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        LKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSA V
Subjt:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_023536766.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]2.0e-12386.6Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDDL
        MAGLT RF FKPLLS SSAT TTSA+A SSSAT ATP+RTS+S LPLSSSKSNAFRFRLH SNSL LVF++  RSTV A+YGG  R SGPADSKR DD L
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDDL

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        G+D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSP+ADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        LKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSASV
Subjt:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]3.1e-12989.19Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLV----FSSPIRSTVFARYGGAPRSSGPADSKRS
        MAGL+ RF FKPLLSQS+  TTTSAAA++SS ++ATP RTSI  LPLSSSK+NAF+FRL KSNSLRLV     SSPIR++VF+RYGGAPRSSGPADSKRS
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLV----FSSPIRSTVFARYGGAPRSSGPADSKRS

Query:  DDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD
        DD+ GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSP+ADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD
Subjt:  DDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD

Query:  YSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSASV
        YSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSA V
Subjt:  YSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSASV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-31.5e-12484.28Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTT----SAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPAD
        MAGL+  F FK LLSQSSA  TT    SAA   +S+++ TP RTS  SLP+SSS SNAF+FRLHKSNSLRL+F    SSPIR++VFAR GGAPRSSGP D
Subjt:  MAGLTSRFTFKPLLSQSSATTTT----SAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPAD

Query:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+D++GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SP+ADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        DQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSASV
Subjt:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A1S3BV82 Translation initiation factor IF-32.7e-12686.87Show/hide
Query:  MAGLTSRFTFKPLLSQSS-ATTTTSAAASSSSATAATPLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPADSK
        MAGL+  F FK LLSQSS A+TTTS AA+ +S+++ TP RTS  SLP+SSS  SNAF+ RLHKSNSLRLVF    SSPIR++VFAR GGAPRSSGP DSK
Subjt:  MAGLTSRFTFKPLLSQSS-ATTTTSAAASSSSATAATPLRTSISSLPLSSS-KSNAFRFRLHKSNSLRLVF----SSPIRSTVFARYGGAPRSSGPADSK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSP+ADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSA V
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A6J1DYM5 Translation initiation factor IF-34.1e-13591.75Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDDL
        MAGLTSRF FKPLLSQSSATT+++AA+SSSSA AA P RTSIS LPLSSS+SNAF FRLH SNSLRL+ SSPIR +VFAR+GGAPRSSGPADSKRSDDD 
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDDL

Query:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
        GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSP+ADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  GLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        LKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSA V
Subjt:  LKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A6J1FCR3 Translation initiation factor IF-33.1e-12286.3Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPL-SSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDD
        MAGLT+RF FKPLLS SSA+ TTSAAA SSSAT ATP+RTSIS LPL SSSKSNAFRFRLH SNSL L+F++  RSTV A+YGG  R SGPADSKR DD 
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPL-SSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDD

Query:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
        LG+D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSP+ADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        RLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSASV
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

A0A6J1I0C0 Translation initiation factor IF-32.1e-12386.64Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATA-ATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDD
        MAGLT RF FKPLLS SSAT TTSAAA SSSATA ATP+RTSIS LPLSSSK NAFRFR H SNSL LVF++  RSTV ++YGGA RSSGPADSKR DD 
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATA-ATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDD

Query:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
        LG+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSP+ADPPVVRIMDY+KYRYE QKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV
Subjt:  LGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV
        RLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KD   VNEVSASV
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-31.1e-3142.61Show/hide
Query:  DSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  DL      IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic1.2e-7563.26Show/hide
Query:  TPLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFSSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK
        T +  ++SS  L S  S     RL K+  S   +  SP R+  V  R+GG     R SG       K ++ D  LD+S+IRS  VRLID QQNM+G+VSK
Subjt:  TPLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFSSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK

Query:  AQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF
         +A++MA+DAELDLV+LSP+ADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV++KGRENEF
Subjt:  AQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF

Query:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS
        RNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SAS
Subjt:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS

Q3MBH6 Translation initiation factor IF-37.0e-3143.33Show/hide
Query:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG
        P   K+   DL      IR   +R+ID   + +GI++  +A+Q+AE+ ELDLV+LS +ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM 
Subjt:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK
        Y I++HDY+VR+K A +FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-37.0e-3143.33Show/hide
Query:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG
        P   K+   DL      IR   +R+ID   + +GI++  +A+Q+AE+ ELDLV+LS +ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM 
Subjt:  PADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK
        Y I++HDY+VR+K A +FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic6.0e-7557.91Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARY--GGAPRSSGPAD----SK
        MAG+TS   F  +L+ ++ T +    +         P  + +S  P    +  A                      +  RY  GG   S  P D     K
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARY--GGAPRSSGPAD----SK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
         S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSP+ADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAS
        HDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK KPA ++VSA+
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAS

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein1.5e-0730.68Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA
        I  + VRL+  + + V  VS  +A++ A++ + DLV +  +A PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA

Query:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
         K ++ G +VK + V  K +  E      +EL+ RF   IG+ A  E+    DR   +V+V +         PPKK
Subjt:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein8.7e-7763.26Show/hide
Query:  TPLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFSSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK
        T +  ++SS  L S  S     RL K+  S   +  SP R+  V  R+GG     R SG       K ++ D  LD+S+IRS  VRLID QQNM+G+VSK
Subjt:  TPLRTSISSLPLSSSKSNAFRFRLHKSN-SLRLVFSSPIRS-TVFARYGGAP---RSSGP---ADSKRSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSK

Query:  AQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF
         +A++MA+DAELDLV+LSP+ADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV++KGRENEF
Subjt:  AQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEF

Query:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS
        RNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SAS
Subjt:  RNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSAS

AT4G30690.1 Translation initiation factor 3 protein4.3e-7657.91Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARY--GGAPRSSGPAD----SK
        MAG+TS   F  +L+ ++ T +    +         P  + +S  P    +  A                      +  RY  GG   S  P D     K
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARY--GGAPRSSGPAD----SK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
         S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSP+ADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAS
        HDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK KPA ++VSA+
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAS

AT4G30690.2 Translation initiation factor 3 protein4.3e-6050.17Show/hide
Query:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARY--GGAPRSSGPAD----SK
        MAG+TS   F  +L+ ++ T +    +         P  + +S  P    +  A                      +  RY  GG   S  P D     K
Subjt:  MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARY--GGAPRSSGPAD----SK

Query:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
         S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSP+ADPPVVR+MDY+                              YNIDQ
Subjt:  RSDDDLGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAS
        HDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK KPA ++VSA+
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCAGCAGATTCACTTTCAAACCTCTCTTATCCCAATCCTCCGCCACCACCACCACCTCCGCCGCCGCCTCCTCCTCCTCCGCCACCGCAGCCACTCC
TCTCCGAACCTCAATTTCCTCTCTCCCCCTCTCCTCATCTAAATCCAATGCCTTCAGATTCCGCCTTCACAAGTCCAACTCTCTGCGTCTCGTCTTCTCAAGTCCAATTC
GTAGTACTGTATTTGCTCGATACGGCGGTGCTCCTCGATCTTCAGGACCGGCAGATTCTAAGCGCTCCGACGATGATCTTGGTCTCGATGTTTCCGCCATCAGGTCGAAT
AATGTGAGGCTTATCGATGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTGTTATCACCCGA
AGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCTGCTACTCGCATGGATTTGA
AAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAGGAAGTTTTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAACTTG
AAAGGTCGTGAGAATGAGTTCAGGAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAA
TATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAAGACAAGCCTGCAGTTAATGAAGTTTCTGCCAGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGCTCACCAGCAGATTCACTTTCAAACCTCTCTTATCCCAATCCTCCGCCACCACCACCACCTCCGCCGCCGCCTCCTCCTCCTCCGCCACCGCAGCCACTCC
TCTCCGAACCTCAATTTCCTCTCTCCCCCTCTCCTCATCTAAATCCAATGCCTTCAGATTCCGCCTTCACAAGTCCAACTCTCTGCGTCTCGTCTTCTCAAGTCCAATTC
GTAGTACTGTATTTGCTCGATACGGCGGTGCTCCTCGATCTTCAGGACCGGCAGATTCTAAGCGCTCCGACGATGATCTTGGTCTCGATGTTTCCGCCATCAGGTCGAAT
AATGTGAGGCTTATCGATGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTGTTATCACCCGA
AGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCTGCTACTCGCATGGATTTGA
AAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAGGAAGTTTTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAACTTG
AAAGGTCGTGAGAATGAGTTCAGGAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAGATTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAA
TATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAAGACAAGCCTGCAGTTAATGAAGTTTCTGCCAGTGTTTAA
Protein sequenceShow/hide protein sequence
MAGLTSRFTFKPLLSQSSATTTTSAAASSSSATAATPLRTSISSLPLSSSKSNAFRFRLHKSNSLRLVFSSPIRSTVFARYGGAPRSSGPADSKRSDDDLGLDVSAIRSN
NVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPEADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNL
KGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSASV