; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006436 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006436
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger protein 830-like isoform X1
Genome locationchr6:42472114..42473264
RNA-Seq ExpressionLag0006436
SyntenyLag0006436
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586051.1 Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.6e-6068.39Show/hide
Query:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
        MEF+FRAGDHRPPPP    QYASP  PPAV+C +KQ FSDACLR +TNIV  RKPFDT+EA+  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFERE
Subjt:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE

Query:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL
        MAIR      GY F   +RWG  F   AAP P PS   VVQS NEW K+E L+ SDRLGF AV LPPR QP MADDK ERQ+LQ D+RE I+L
Subjt:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL

XP_022937456.1 uncharacterized protein LOC111443862 [Cucurbita moschata]3.6e-5767.36Show/hide
Query:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
        MEF+FRAGDHRPPPP    QYASP  PPAV+C +KQ FSDACLR +TNIV  RKPFDT+EA+  EMEL  LR+EKLL EIERQ+FLKE+ARREL+LFERE
Subjt:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE

Query:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL
        MAIR      GY F   +RWG  F   AAP P PS   VVQS NEW K+E L+ SDRLG  AV LPPR QP MADDK ERQVLQ D+RE I+L
Subjt:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL

XP_022969583.1 uncharacterized protein LOC111468562 [Cucurbita maxima]8.6e-5966.67Show/hide
Query:  MEFKFRAGDHRPPPPP---QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREM
        MEF+FRAGDHRPPPP    QYASP PPAV+C +KQ FSDACLR +TNI+  RKPFDT+E +  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFEREM
Subjt:  MEFKFRAGDHRPPPPP---QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREM

Query:  AIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL
        AIR      GY F   +RWG  F   AAP   PS   VVQS NEW K+E L+ SDRLGF    LPPR QP MADDK ERQVLQ D+RE I+L
Subjt:  AIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL

XP_023536654.1 uncharacterized protein LOC111797967 [Cucurbita pepo subsp. pepo]3.3e-5867.36Show/hide
Query:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
        MEF+FRAGDHRPPPP    QYASP  PPAVYC +KQ FSDACLR +TNIV  RKPFDT+EA+  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFERE
Subjt:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE

Query:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL
        MAIR      GY F   +RWG  F   AAP   PS   VVQS NEW K+E L+ SDRLGF AV  PPR +P M DDK ERQVLQ D+RE I+L
Subjt:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL

XP_038890954.1 uncharacterized protein LOC120080381 isoform X1 [Benincasa hispida]9.5e-5866Show/hide
Query:  MEFKFRAGDHRPPPPP--QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREMA
        MEFKFRAGDHRPPPPP  QY  P P AVYC + QRF + CLRR T+I+      D+N+ + +EMELMRLREEKLLAEIERQRFLKEEARRELMLFEREMA
Subjt:  MEFKFRAGDHRPPPPP--QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREMA

Query:  IRGLRHSAGYSFREQHRWGTSF---GAAPSPS----PSPVAVVQSFNEWRKIENLKFSDRLGFDAVAL----PPRAQPFMADDKKERQVLQADKREFIVL
        IRG+   AG+  R+  RWG  F    AAPSPS    PSP  VVQSF+EWRK+E  K SDRLGF AVAL    PPR QP M +DKKE +VL+A KRE IVL
Subjt:  IRGLRHSAGYSFREQHRWGTSF---GAAPSPS----PSPVAVVQSFNEWRKIENLKFSDRLGFDAVAL----PPRAQPFMADDKKERQVLQADKREFIVL

TrEMBL top hitse value%identityAlignment
A0A6J1FAE1 uncharacterized protein LOC1114438621.7e-5767.36Show/hide
Query:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE
        MEF+FRAGDHRPPPP    QYASP  PPAV+C +KQ FSDACLR +TNIV  RKPFDT+EA+  EMEL  LR+EKLL EIERQ+FLKE+ARREL+LFERE
Subjt:  MEFKFRAGDHRPPPPP---QYASP-RPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFERE

Query:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL
        MAIR      GY F   +RWG  F   AAP P PS   VVQS NEW K+E L+ SDRLG  AV LPPR QP MADDK ERQVLQ D+RE I+L
Subjt:  MAIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL

A0A6J1I1E4 uncharacterized protein LOC1114685624.2e-5966.67Show/hide
Query:  MEFKFRAGDHRPPPPP---QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREM
        MEF+FRAGDHRPPPP    QYASP PPAV+C +KQ FSDACLR +TNI+  RKPFDT+E +  EMELMRLR+EKLL EIERQ+FLKE+ARREL+LFEREM
Subjt:  MEFKFRAGDHRPPPPP---QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREM

Query:  AIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL
        AIR      GY F   +RWG  F   AAP   PS   VVQS NEW K+E L+ SDRLGF    LPPR QP MADDK ERQVLQ D+RE I+L
Subjt:  AIRGLRHSAGYSFREQHRWGTSFG--AAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVL

A0A6J1KBF0 zinc finger protein 830-like isoform X42.1e-5055.56Show/hide
Query:  MEFKFRAGDHRPPPPP-------------------QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRF
        MEFKFRAGD R PPPP                   Q A P PP  +C  KQ F DA L R TN+ T+R PFDTNE +  EMELMRLR+EKL+ EIERQRF
Subjt:  MEFKFRAGDHRPPPPP-------------------QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRF

Query:  LKEEARRELMLFEREMAIRGLRHSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQAD
        L+E+ARRELMLFERE AI  +  S GY  R+   WG  F AA PS SPSP  +VQSF EW++++  K S+ LGF   ALPPR QPFMA+  +ERQV+Q D
Subjt:  LKEEARRELMLFEREMAIRGLRHSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQAD

Query:  KREFIVL
        + + IVL
Subjt:  KREFIVL

A0A6J1KDP5 zinc finger protein 830-like isoform X32.1e-5055.56Show/hide
Query:  MEFKFRAGDHRPPPPP-------------------QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRF
        MEFKFRAGD R PPPP                   Q A P PP  +C  KQ F DA L R TN+ T+R PFDTNE +  EMELMRLR+EKL+ EIERQRF
Subjt:  MEFKFRAGDHRPPPPP-------------------QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRF

Query:  LKEEARRELMLFEREMAIRGLRHSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQAD
        L+E+ARRELMLFERE AI  +  S GY  R+   WG  F AA PS SPSP  +VQSF EW++++  K S+ LGF   ALPPR QPFMA+  +ERQV+Q D
Subjt:  LKEEARRELMLFEREMAIRGLRHSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQAD

Query:  KREFIVL
        + + IVL
Subjt:  KREFIVL

A0A6J1KKC7 zinc finger protein 830-like isoform X12.1e-5055.56Show/hide
Query:  MEFKFRAGDHRPPPPP-------------------QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRF
        MEFKFRAGD R PPPP                   Q A P PP  +C  KQ F DA L R TN+ T+R PFDTNE +  EMELMRLR+EKL+ EIERQRF
Subjt:  MEFKFRAGDHRPPPPP-------------------QYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRF

Query:  LKEEARRELMLFEREMAIRGLRHSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQAD
        L+E+ARRELMLFERE AI  +  S GY  R+   WG  F AA PS SPSP  +VQSF EW++++  K S+ LGF   ALPPR QPFMA+  +ERQV+Q D
Subjt:  LKEEARRELMLFEREMAIRGLRHSAGYSFREQHRWGTSFGAA-PSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQAD

Query:  KREFIVL
        + + IVL
Subjt:  KREFIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCAAGTTCCGTGCCGGCGATCACCGACCGCCACCGCCGCCGCAGTATGCGTCTCCTCGGCCGCCGGCTGTTTACTGTTTCGCTAAGCAAAGGTTTTCAGATGC
CTGTCTCAGGCGAAACACGAACATCGTAACTATTAGAAAGCCGTTCGATACCAACGAGGCGATTGAGTATGAGATGGAGTTGATGCGATTGAGAGAAGAGAAACTGCTGG
CGGAGATTGAACGGCAGCGATTTCTGAAAGAGGAAGCGAGGCGAGAGCTGATGTTGTTCGAACGGGAGATGGCGATTCGAGGACTTCGGCATTCGGCGGGCTATTCTTTC
CGTGAGCAGCACCGATGGGGAACGTCGTTCGGCGCAGCGCCGTCGCCGTCGCCGTCTCCGGTGGCGGTAGTGCAGTCGTTCAATGAATGGCGGAAAATCGAGAATTTGAA
ATTTTCCGACCGCCTTGGGTTTGATGCAGTGGCGTTGCCGCCTCGGGCTCAGCCATTTATGGCGGATGACAAAAAGGAGCGTCAAGTACTGCAGGCTGATAAAAGAGAAT
TCATTGTACTGGTCTGGCTCTATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCAAGTTCCGTGCCGGCGATCACCGACCGCCACCGCCGCCGCAGTATGCGTCTCCTCGGCCGCCGGCTGTTTACTGTTTCGCTAAGCAAAGGTTTTCAGATGC
CTGTCTCAGGCGAAACACGAACATCGTAACTATTAGAAAGCCGTTCGATACCAACGAGGCGATTGAGTATGAGATGGAGTTGATGCGATTGAGAGAAGAGAAACTGCTGG
CGGAGATTGAACGGCAGCGATTTCTGAAAGAGGAAGCGAGGCGAGAGCTGATGTTGTTCGAACGGGAGATGGCGATTCGAGGACTTCGGCATTCGGCGGGCTATTCTTTC
CGTGAGCAGCACCGATGGGGAACGTCGTTCGGCGCAGCGCCGTCGCCGTCGCCGTCTCCGGTGGCGGTAGTGCAGTCGTTCAATGAATGGCGGAAAATCGAGAATTTGAA
ATTTTCCGACCGCCTTGGGTTTGATGCAGTGGCGTTGCCGCCTCGGGCTCAGCCATTTATGGCGGATGACAAAAAGGAGCGTCAAGTACTGCAGGCTGATAAAAGAGAAT
TCATTGTACTGGTCTGGCTCTATCCCTAA
Protein sequenceShow/hide protein sequence
MEFKFRAGDHRPPPPPQYASPRPPAVYCFAKQRFSDACLRRNTNIVTIRKPFDTNEAIEYEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREMAIRGLRHSAGYSF
REQHRWGTSFGAAPSPSPSPVAVVQSFNEWRKIENLKFSDRLGFDAVALPPRAQPFMADDKKERQVLQADKREFIVLVWLYP