; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006459 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006459
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr6:42697764..42699223
RNA-Seq ExpressionLag0006459
SyntenyLag0006459
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.9e-4150.9Show/hide
Query:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ
        MK +VP KFK+P +K+Y+G  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS R WF++LKR+SIS FKELA+AF+ QF G     +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ

Query:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKG
        +  ESL+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S GK    T++E  SRAQ   + G
Subjt:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKG

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.6e-4244.74Show/hide
Query:  EEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLT
        EE+MK +VP KFK+PT+KQ++G  D V HL+AYR WMD +GVS+A++CR F  TL+GSAR WF +LKR SIS FK LA+AF+ QF+G R   +P   LLT
Subjt:  EEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLT

Query:  VKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKGS--GPTREAGAEQTMAEADQT--------M
        +KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S GK  P T++E +SRAQ   + G      RE   +Q+    +++         
Subjt:  VKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKGS--GPTREAGAEQTMAEADQT--------M

Query:  AEANQTKEHLLSVSLENTPQLLFCRSKY
         + +++   +   +L+N  QL F  SKY
Subjt:  AEANQTKEHLLSVSLENTPQLLFCRSKY

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]4.2e-4354.04Show/hide
Query:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ
        MK +   KFK+P + +Y+G  DP+ HL+AYR W D + + +AIRCR F FTLTGSAR+WF +LKR SIS FKELA+AF+ QF+G R   KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ

Query:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ
        +  ESL++Y+ RFN+E LQVEG ++   L+A  +G++DERL+ S GK  P T+ E +SRAQ
Subjt:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.6e-4737.4Show/hide
Query:  DRHQRRSRDDDNIR-----GSPRQAGRGRGRAEDADTKIAAL-EDEVKGMNRSLSRILQILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESKTRSNGKK
        +R  RRS DD + +     G P+  G   G ++    +   L E           +   +L+      ++ +  LVRDP+KGK P E   E  T S G  
Subjt:  DRHQRRSRDDDNIR-----GSPRQAGRGRGRAEDADTKIAAL-EDEVKGMNRSLSRILQILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESKTRSNGKK

Query:  TDNMTSKVR-GLKPTDRTILRSPESSTFKGRDYTVSTPSYGHTKTDLRNLIVEKRRSAKTAESEAKAAEAEARAAEAEAEAKKDDLPWKTELLNALKKLG
             SK+R G     RT +  P  +    + +    P+ G +  D RN             SE  + +          + K  D P  +E  ++ K+ G
Subjt:  TDNMTSKVR-GLKPTDRTILRSPESSTFKGRDYTVSTPSYGHTKTDLRNLIVEKRRSAKTAESEAKAAEAEARAAEAEAEAKKDDLPWKTELLNALKKLG

Query:  NPQGDQQKSKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSI
                       +LE L DQ D  FTEE+M+ +VP KFK+PT+KQ++   DPV HL+AYR WMD +GVS+A+RCR F  TL GSAR WF +LKR SI
Subjt:  NPQGDQQKSKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSI

Query:  SCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ
        S FK LA+AF+ QF+G R   +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ
Subjt:  SCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]4.7e-4750.74Show/hide
Query:  LNALKKLGNPQGDQQK--SKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARH
        LN  K +  P+  +++   K+ G  +LE L  Q D  FTEE+M+ +VP KFK+PT+K ++G  +PV HL+AYR WMD +GVSDAIRCR F  TL GSAR 
Subjt:  LNALKKLGNPQGDQQK--SKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARH

Query:  WFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVS
        WF +LKR SIS FK LA+AF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L  S  K  P T++E +S
Subjt:  WFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVS

Query:  RAQ
        RAQ
Subjt:  RAQ

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.9e-4150.9Show/hide
Query:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ
        MK +VP KFK+P +K+Y+G  DP+ HL+ Y  W D +G+++AIRCR F FTLTGS R WF++LKR+SIS FKELA+AF+ QF G     +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ

Query:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKG
        +  ESL+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S GK    T++E  SRAQ   + G
Subjt:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKG

A0A6J1D7D2 uncharacterized protein LOC1110183077.6e-4344.74Show/hide
Query:  EEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLT
        EE+MK +VP KFK+PT+KQ++G  D V HL+AYR WMD +GVS+A++CR F  TL+GSAR WF +LKR SIS FK LA+AF+ QF+G R   +P   LLT
Subjt:  EEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLT

Query:  VKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKGS--GPTREAGAEQTMAEADQT--------M
        +KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S GK  P T++E +SRAQ   + G      RE   +Q+    +++         
Subjt:  VKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKGS--GPTREAGAEQTMAEADQT--------M

Query:  AEANQTKEHLLSVSLENTPQLLFCRSKY
         + +++   +   +L+N  QL F  SKY
Subjt:  AEANQTKEHLLSVSLENTPQLLFCRSKY

A0A6J1DWY0 uncharacterized protein LOC1110252931.8e-4737.4Show/hide
Query:  DRHQRRSRDDDNIR-----GSPRQAGRGRGRAEDADTKIAAL-EDEVKGMNRSLSRILQILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESKTRSNGKK
        +R  RRS DD + +     G P+  G   G ++    +   L E           +   +L+      ++ +  LVRDP+KGK P E   E  T S G  
Subjt:  DRHQRRSRDDDNIR-----GSPRQAGRGRGRAEDADTKIAAL-EDEVKGMNRSLSRILQILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESKTRSNGKK

Query:  TDNMTSKVR-GLKPTDRTILRSPESSTFKGRDYTVSTPSYGHTKTDLRNLIVEKRRSAKTAESEAKAAEAEARAAEAEAEAKKDDLPWKTELLNALKKLG
             SK+R G     RT +  P  +    + +    P+ G +  D RN             SE  + +          + K  D P  +E  ++ K+ G
Subjt:  TDNMTSKVR-GLKPTDRTILRSPESSTFKGRDYTVSTPSYGHTKTDLRNLIVEKRRSAKTAESEAKAAEAEARAAEAEAEAKKDDLPWKTELLNALKKLG

Query:  NPQGDQQKSKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSI
                       +LE L DQ D  FTEE+M+ +VP KFK+PT+KQ++   DPV HL+AYR WMD +GVS+A+RCR F  TL GSAR WF +LKR SI
Subjt:  NPQGDQQKSKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSI

Query:  SCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ
        S FK LA+AF+ QF+G R   +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ
Subjt:  SCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ

A0A6J1DZ49 uncharacterized protein LOC1110248512.0e-4354.04Show/hide
Query:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ
        MK +   KFK+P + +Y+G  DP+ HL+AYR W D + + +AIRCR F FTLTGSAR+WF +LKR SIS FKELA+AF+ QF+G R   KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQ

Query:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ
        +  ESL++Y+ RFN+E LQVEG ++   L+A  +G++DERL+ S GK  P T+ E +SRAQ
Subjt:  QPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQ

A0A6J1E1E7 uncharacterized protein LOC1110255482.3e-4750.74Show/hide
Query:  LNALKKLGNPQGDQQK--SKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARH
        LN  K +  P+  +++   K+ G  +LE L  Q D  FTEE+M+ +VP KFK+PT+K ++G  +PV HL+AYR WMD +GVSDAIRCR F  TL GSAR 
Subjt:  LNALKKLGNPQGDQQK--SKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARH

Query:  WFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVS
        WF +LKR SIS FK LA+AF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L  S  K  P T++E +S
Subjt:  WFERLKRRSISCFKELAQAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVS

Query:  RAQ
        RAQ
Subjt:  RAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAGGGGATGGTGAAGAAAGACCAAGACGTAAACATAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGTGACGATGACAACATTCGGGGGTCACCGAG
ACAAGCAGGCCGAGGCCGAGGCCGAGCAGAGGATGCTGACACCAAAATTGCCGCCCTTGAGGATGAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCC
TGGATAAACCCGGCCCTAGCACTAAAACCCCTGATGAGAGGCTGGTTAGGGATCCGAGGAAAGGGAAGGAGCCTATGGAGCACACTGCAGAGTCAAAGACGAGGTCAAAT
GGAAAGAAGACTGACAACATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGCACGATTTTGAGGAGCCCAGAGTCAAGCACATTTAAGGGGCGTGACTACACAGT
CTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGTTGAGAAGCGCAGAAGTGCCAAAACTGCCGAGTCCGAGGCCAAAGCTGCCGAAGCTGAAG
CCCGGGCTGCCGAGGCTGAGGCCGAGGCTAAGAAAGACGACCTCCCTTGGAAGACCGAGCTTCTAAACGCACTAAAGAAGCTCGGAAATCCTCAGGGAGACCAGCAGAAG
TCAAAGGACCTTGGAGATCAAAACTTGGAAGTACTAGCCGACCAAGTCGATCCGTCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCTCAAAAGTTTAAGGTACCCAC
GCTCAAACAGTACAATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGCCGCACATTCTTTT
TCACTCTGACAGGATCAGCCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAAGAGTTGGCCCAAGCATTCCTTGCACAGTTCATGGGAGCCAGA
GAACTACGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGCCAGGTGAGAGCTTACGTGATTACATAACGCGTTTTAACGATGAAGCACTGCAGGTTGAGGGATA
CAGCGAGGGAGCAACCCTAGTAGCCATAACAGCCGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCGGAGTTTGTCTCCCGGG
CACAAATAAAAAGAACAAAAGGCAGCGGACCGACGAGGGAGGCCGGGGCCGAGCAGACCATGGCCGAGGCCGACCAAACAATGGCTGAGGCCAACCAGACCAAGGAGCAC
CTCCTTTCGGTAAGTTTGGAAAATACACCCCAACTGTTGTTCTGCAGGAGCAAGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAGGGGATGGTGAAGAAAGACCAAGACGTAAACATAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGTGACGATGACAACATTCGGGGGTCACCGAG
ACAAGCAGGCCGAGGCCGAGGCCGAGCAGAGGATGCTGACACCAAAATTGCCGCCCTTGAGGATGAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCC
TGGATAAACCCGGCCCTAGCACTAAAACCCCTGATGAGAGGCTGGTTAGGGATCCGAGGAAAGGGAAGGAGCCTATGGAGCACACTGCAGAGTCAAAGACGAGGTCAAAT
GGAAAGAAGACTGACAACATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGCACGATTTTGAGGAGCCCAGAGTCAAGCACATTTAAGGGGCGTGACTACACAGT
CTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGTTGAGAAGCGCAGAAGTGCCAAAACTGCCGAGTCCGAGGCCAAAGCTGCCGAAGCTGAAG
CCCGGGCTGCCGAGGCTGAGGCCGAGGCTAAGAAAGACGACCTCCCTTGGAAGACCGAGCTTCTAAACGCACTAAAGAAGCTCGGAAATCCTCAGGGAGACCAGCAGAAG
TCAAAGGACCTTGGAGATCAAAACTTGGAAGTACTAGCCGACCAAGTCGATCCGTCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCTCAAAAGTTTAAGGTACCCAC
GCTCAAACAGTACAATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGCCGCACATTCTTTT
TCACTCTGACAGGATCAGCCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAAGAGTTGGCCCAAGCATTCCTTGCACAGTTCATGGGAGCCAGA
GAACTACGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGCCAGGTGAGAGCTTACGTGATTACATAACGCGTTTTAACGATGAAGCACTGCAGGTTGAGGGATA
CAGCGAGGGAGCAACCCTAGTAGCCATAACAGCCGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCGGAGTTTGTCTCCCGGG
CACAAATAAAAAGAACAAAAGGCAGCGGACCGACGAGGGAGGCCGGGGCCGAGCAGACCATGGCCGAGGCCGACCAAACAATGGCTGAGGCCAACCAGACCAAGGAGCAC
CTCCTTTCGGTAAGTTTGGAAAATACACCCCAACTGTTGTTCTGCAGGAGCAAGTACTGA
Protein sequenceShow/hide protein sequence
MSKGMVKKDQDVNIENSDGDRHQRRSRDDDNIRGSPRQAGRGRGRAEDADTKIAALEDEVKGMNRSLSRILQILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESKTRSN
GKKTDNMTSKVRGLKPTDRTILRSPESSTFKGRDYTVSTPSYGHTKTDLRNLIVEKRRSAKTAESEAKAAEAEARAAEAEAEAKKDDLPWKTELLNALKKLGNPQGDQQK
SKDLGDQNLEVLADQVDPSFTEEVMKAEVPQKFKVPTLKQYNGKKDPVQHLNAYRSWMDFHGVSDAIRCRTFFFTLTGSARHWFERLKRRSISCFKELAQAFLAQFMGAR
ELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQIKRTKGSGPTREAGAEQTMAEADQTMAEANQTKEH
LLSVSLENTPQLLFCRSKY