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Lag0006478 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006478
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein NIM1-INTERACTING 3-like
Genome locationchr6:42885417..42885809
RNA-Seq ExpressionLag0006478
SyntenyLag0006478
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599168.1 hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2557.14Show/hide
Query:  MEGGRKRRKLQN------TEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEK-SKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQ
        MEGGRKRRKLQN       E+E+E+EDEDEEE MKLFFALIQNTKAMRD+ IKSK+S++E+  +KG+WNPKFQPEDF+ EDG+ ++      +KS   ++
Subjt:  MEGGRKRRKLQN------TEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEK-SKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQ

Query:  LAASSSSTPKQSNQKDEQQD----------KDKVGETNKGLDLNLSL
        L A+SSS  KQSNQK+E Q+          ++++ E  KGLDLNLSL
Subjt:  LAASSSSTPKQSNQKDEQQD----------KDKVGETNKGLDLNLSL

KGN61024.1 hypothetical protein Csa_021295 [Cucumis sativus]5.9e-2762.88Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS
        ME GRKRRKLQ      EEE+E+E+E M+LF+ALIQNTKAMRD +  SK+ ++EEKSKG+WNPKFQPEDF EEDGY  NNKSN        LQL+A+SSS
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS

Query:  TPKQSNQKDEQQDKD--KVGETNKGLDLNLSL
        T KQ N+K +Q++    KV E  KGLDLNLSL
Subjt:  TPKQSNQKDEQQDKD--KVGETNKGLDLNLSL

XP_038889660.1 protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]6.7e-2366.94Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS
        ME GRKRRKL    +EEEEED+DEE  MKL FALIQN KAMR R +KSK+S +EEKSKG+WNPKFQPEDF+ EDGY        +NKSN TLQL A+SSS
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS

Query:  TPKQSNQK---DEQQDKDKVG
        T K SN K    EQQDK KVG
Subjt:  TPKQSNQK---DEQQDKDKVG

XP_038889661.1 protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]7.4e-2266.67Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS
        ME GRKRRKL    +EEEEED+DEE  MKL FALIQN KAMR R +KSK+S +EEKSKG+WNPKFQPEDF+ EDGY        +NKSN TLQL A+SSS
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS

Query:  TPKQSNQKDEQQDK
        T K SN K EQQ++
Subjt:  TPKQSNQKDEQQDK

XP_038889662.1 protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]7.4e-2263.64Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS
        ME GRKRRKL    +EEEEED+DEE  MKL FALIQN KAMR R +KSK+S +EEKSKG+WNPKFQPEDF+ EDGY        +NKSN TLQL A+SSS
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS

Query:  TPKQSNQKDEQQDKDKVGETN
        T K SN K EQQ++    +T+
Subjt:  TPKQSNQKDEQQDKDKVGETN

TrEMBL top hitse value%identityAlignment
A0A0A0LJ23 Uncharacterized protein2.8e-2762.88Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS
        ME GRKRRKLQ      EEE+E+E+E M+LF+ALIQNTKAMRD +  SK+ ++EEKSKG+WNPKFQPEDF EEDGY  NNKSN        LQL+A+SSS
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS

Query:  TPKQSNQKDEQQDKD--KVGETNKGLDLNLSL
        T KQ N+K +Q++    KV E  KGLDLNLSL
Subjt:  TPKQSNQKDEQQDKD--KVGETNKGLDLNLSL

A0A2I4EAN7 protein NIM1-INTERACTING 3-like1.2e-0942.96Show/hide
Query:  MEGGRKRRKLQNTE--QEEEEEDEDEEENMKLFFALIQNTKAMRDR----IIKSKDSSQ------EEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKS
        MEG  K+RK+ N E   EEEEE+EDEE+ M+ FFALI++T+ +RDR    + +SKD  +      E K+  +WNPKFQPEDF  E             KS
Subjt:  MEGGRKRRKLQNTE--QEEEEEDEDEEENMKLFFALIQNTKAMRDR----IIKSKDSSQ------EEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKS

Query:  NTTLQLAASSSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL
        +T     AS+   P +  +K+E+++++  G+ +KGLDLNLSL
Subjt:  NTTLQLAASSSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL

A0A4S4D4V2 Uncharacterized protein4.1e-1040.74Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKG-----IWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLA
        M+G  ++RK++N      EED+D+EE M+ FFALI++T+  R R++   D  QE + KG      WNP FQPEDFME  G G  +KS    +++  L LA
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKG-----IWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLA

Query:  ASSSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL
         + +   K+   + ++Q++D  G  N GLDL LSL
Subjt:  ASSSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL

A0A6J1DQG7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110232841.8e-2155.38Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS
        ME  R++RKLQ+ E+E ++EDE+EEE MKLFFALIQNTK++RDR+   + + Q++KSKG+WNPKFQPEDF+E+             KSN T Q AA SSS
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSS

Query:  TPKQSNQKDEQQDKDKVGETNKGLDLNLSL
        T +++ Q++E+Q KDKV E  + LDLNLSL
Subjt:  TPKQSNQKDEQQDKDKVGETNKGLDLNLSL

A0A6P9EP42 protein NIM1-INTERACTING 1-like2.4e-1040.56Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRI------IKSKDSSQEE-------KSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNK
        MEG RK+RK+  +E+ E++ED DEE+ ++ FF LI++T+ +RDR+       +SKD  +E+       K   +WNP FQPEDF+++D      KS+KS  
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRI------IKSKDSSQEE-------KSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNK

Query:  SNTTLQLAASSSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL
           T Q   S S+T     + +E++D+D+  + N GLDLNLSL
Subjt:  SNTTLQLAASSSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL

SwissProt top hitse value%identityAlignment
Q9FNZ4 Protein NIM1-INTERACTING 34.3e-0431.58Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRI---IKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAAS
        M+  RKR K+        E+++DEEE M+  + +++N + MR  +   ++ K   +EE+++    P FQPEDF+  +   +NN    +N+S++       
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRI---IKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAAS

Query:  SSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL
               SN+ D  ++K +  ETN  LDLNLSL
Subjt:  SSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL

Arabidopsis top hitse value%identityAlignment
AT1G09415.1 NIM1-interacting 33.0e-0531.58Show/hide
Query:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRI---IKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAAS
        M+  RKR K+        E+++DEEE M+  + +++N + MR  +   ++ K   +EE+++    P FQPEDF+  +   +NN    +N+S++       
Subjt:  MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRI---IKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAAS

Query:  SSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL
               SN+ D  ++K +  ETN  LDLNLSL
Subjt:  SSSTPKQSNQKDEQQDKDKVGETNKGLDLNLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGGAAGAAAAAGAAGAAAATTGCAGAACACTGAACAAGAAGAAGAAGAAGAAGATGAAGATGAAGAGGAAAACATGAAGCTGTTCTTTGCTCTGATTCAAAA
CACCAAAGCCATGAGAGACAGAATCATCAAATCCAAAGACTCATCACAAGAAGAGAAATCCAAAGGGATTTGGAATCCAAAGTTCCAACCAGAAGATTTCATGGAAGAAG
ATGGCTATGGCAGCAACAACAAATCCAACAAATCCAACAAATCCAACACAACCCTTCAGCTAGCAGCTTCTTCATCTTCAACACCAAAACAGAGCAACCAAAAAGATGAA
CAACAAGATAAAGACAAGGTTGGAGAAACAAATAAAGGGCTTGATCTCAATCTCTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAGGAAGAAAAAGAAGAAAATTGCAGAACACTGAACAAGAAGAAGAAGAAGAAGATGAAGATGAAGAGGAAAACATGAAGCTGTTCTTTGCTCTGATTCAAAA
CACCAAAGCCATGAGAGACAGAATCATCAAATCCAAAGACTCATCACAAGAAGAGAAATCCAAAGGGATTTGGAATCCAAAGTTCCAACCAGAAGATTTCATGGAAGAAG
ATGGCTATGGCAGCAACAACAAATCCAACAAATCCAACAAATCCAACACAACCCTTCAGCTAGCAGCTTCTTCATCTTCAACACCAAAACAGAGCAACCAAAAAGATGAA
CAACAAGATAAAGACAAGGTTGGAGAAACAAATAAAGGGCTTGATCTCAATCTCTCTCTTTGA
Protein sequenceShow/hide protein sequence
MEGGRKRRKLQNTEQEEEEEDEDEEENMKLFFALIQNTKAMRDRIIKSKDSSQEEKSKGIWNPKFQPEDFMEEDGYGSNNKSNKSNKSNTTLQLAASSSSTPKQSNQKDE
QQDKDKVGETNKGLDLNLSL