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Lag0006493 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006493
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:43007845..43013369
RNA-Seq ExpressionLag0006493
SyntenyLag0006493
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599176.1 hypothetical protein SDJN03_08954, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1864.65Show/hide
Query:  NAKEQSSNGGKVIEIGIPVAGIRIFPQILHLPVAQRPLLALLMELELRLVPPLASRPPQRSDRRRTRLVRHVRLRIRRLSLHDRLLLRLLRLQLVNSAH
        + + +S NGGKV +I I              PV +RP LALLMELE RLVPPLASRP Q SDRRR RLVRH RLRIRRLSLHDRLLLRLLRLQL+   H
Subjt:  NAKEQSSNGGKVIEIGIPVAGIRIFPQILHLPVAQRPLLALLMELELRLVPPLASRPPQRSDRRRTRLVRHVRLRIRRLSLHDRLLLRLLRLQLVNSAH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCCCCACCCACCCCTTCTTTCTTTTTTTTTTCCTTCTTCTTCTTCTCCTCGCTCACCGCCGCCGCCGCCATCTTCCACCACCACGGTTGCCGCGCGTTCCATT
TCTCATCTCTCCCATTCACTCCTTCTCTCCGAAACCCTCTTTCTTTCCTCCATCTTTTTTCTTCTTCTTCTCCTCGCCGATCGCAGCCGCCGTCACGAGTATTGGGTCTG
AAATAAGAAGAAGAAAAAACGTGGAGTTGGGGAGGAGGCTCCGACGGCGACGCCGACGGCGAAGAGGAAGATTGGACGGCGGTGAGGGATTCGAGGGGCTGGTTTGTATC
TTCGCCGGATCAATGTGCTTGCCGAATTCGCAGTCGGAGATGGGAAAGAGGTGGGCGGCGATGCATACTCTCCAGTCTCTCCAATCTCGCCAGAGTTTCAGGAACGCGAA
GGAGCAGAGCAGCAATGGCGGGAAGGTCATCGAGATCGGCATTCCGGTGGCCGGAATTCGAATTTTCCCTCAGATCCTCCATCTTCCGGTGGCCCAGCGTCCTCTCCTCG
CTCTTCTCATGGAACTGGAGCTCCGCCTGGTTCCGCCGCTGGCCTCGCGGCCTCCTCAACGCTCCGATCGTCGACGAACTCGTCTGGTCCGTCATGTCCGCCTTCGAATC
CGTCGCCTTAGTCTCCATGATCGGCTTCTTCTTCGTCTTCTACGGCTGCAACTTGTAAACTCCGCGCACTCCTCGTCCAGCCGGCGAACGATTCCACATTCCAACACCTG
TCGCTTCCTCAGCGGCGACGTAGACGGCAGTAGAAAGAGATTTGACTGGAGCTTTTCTTCTCTTTCAACCCATCATCTCAAGAGTTTCACTAGACTCTCGGCAATGGTAC
GTAGTTCGTCATTAGAAATCAAAAGTTCCGTCGGAGGAAAGTCTGTTCAGAAGTCACCGGCGTTCATTGAGCAATCCGCGGAGGAAACGAAGCCTCAGGGTCGGTGGCAC
AGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCCCCACCCACCCCTTCTTTCTTTTTTTTTTCCTTCTTCTTCTTCTCCTCGCTCACCGCCGCCGCCGCCATCTTCCACCACCACGGTTGCCGCGCGTTCCATT
TCTCATCTCTCCCATTCACTCCTTCTCTCCGAAACCCTCTTTCTTTCCTCCATCTTTTTTCTTCTTCTTCTCCTCGCCGATCGCAGCCGCCGTCACGAGTATTGGGTCTG
AAATAAGAAGAAGAAAAAACGTGGAGTTGGGGAGGAGGCTCCGACGGCGACGCCGACGGCGAAGAGGAAGATTGGACGGCGGTGAGGGATTCGAGGGGCTGGTTTGTATC
TTCGCCGGATCAATGTGCTTGCCGAATTCGCAGTCGGAGATGGGAAAGAGGTGGGCGGCGATGCATACTCTCCAGTCTCTCCAATCTCGCCAGAGTTTCAGGAACGCGAA
GGAGCAGAGCAGCAATGGCGGGAAGGTCATCGAGATCGGCATTCCGGTGGCCGGAATTCGAATTTTCCCTCAGATCCTCCATCTTCCGGTGGCCCAGCGTCCTCTCCTCG
CTCTTCTCATGGAACTGGAGCTCCGCCTGGTTCCGCCGCTGGCCTCGCGGCCTCCTCAACGCTCCGATCGTCGACGAACTCGTCTGGTCCGTCATGTCCGCCTTCGAATC
CGTCGCCTTAGTCTCCATGATCGGCTTCTTCTTCGTCTTCTACGGCTGCAACTTGTAAACTCCGCGCACTCCTCGTCCAGCCGGCGAACGATTCCACATTCCAACACCTG
TCGCTTCCTCAGCGGCGACGTAGACGGCAGTAGAAAGAGATTTGACTGGAGCTTTTCTTCTCTTTCAACCCATCATCTCAAGAGTTTCACTAGACTCTCGGCAATGGTAC
GTAGTTCGTCATTAGAAATCAAAAGTTCCGTCGGAGGAAAGTCTGTTCAGAAGTCACCGGCGTTCATTGAGCAATCCGCGGAGGAAACGAAGCCTCAGGGTCGGTGGCAC
AGATAG
Protein sequenceShow/hide protein sequence
MATPTHPFFLFFFLLLLLLAHRRRRHLPPPRLPRVPFLISPIHSFSPKPSFFPPSFFFFFSSPIAAAVTSIGSEIRRRKNVELGRRLRRRRRRRRGRLDGGEGFEGLVCI
FAGSMCLPNSQSEMGKRWAAMHTLQSLQSRQSFRNAKEQSSNGGKVIEIGIPVAGIRIFPQILHLPVAQRPLLALLMELELRLVPPLASRPPQRSDRRRTRLVRHVRLRI
RRLSLHDRLLLRLLRLQLVNSAHSSSSRRTIPHSNTCRFLSGDVDGSRKRFDWSFSSLSTHHLKSFTRLSAMVRSSSLEIKSSVGGKSVQKSPAFIEQSAEETKPQGRWH
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