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Lag0006531 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006531
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:43340260..43340840
RNA-Seq ExpressionLag0006531
SyntenyLag0006531
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1178059.1 unnamed protein product [Sepia pharaonis]2.9e-0535.51Show/hide
Query:  VTC---PSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLAS
        +TC   P HL S S  P I         P HL S SD P I         P HL S    P I         PSHL S SD P I         PS L  
Subjt:  VTC---PSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLAS

Query:  GSDQPLI
         S  P I
Subjt:  GSDQPLI
CAE1298543.1 unnamed protein product [Sepia pharaonis]1.5e-0433.66Show/hide
Query:  PSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLASGSDQPL
        P HL S S  P I   F     P  L S S  P I         P+HL S S  P+I   F     P HL S S    I       + P  L S S  P 
Subjt:  PSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLASGSDQPL

Query:  I
        I
Subjt:  I
CAE1322405.1 unnamed protein product [Sepia pharaonis]7.4e-0939.25Show/hide
Query:  VTC---PSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLAS
        +TC   PSHL S SD P I         P+HL S SD P I         PSHL S S  P I         PSHL S SD P I         P+ L S
Subjt:  VTC---PSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLAS

Query:  GSDQPLI
         S  P I
Subjt:  GSDQPLI
KAG7335348.1 hypothetical protein KOW79_001944 [Hemibagrus wyckioides]2.5e-0425Show/hide
Query:  MVTCPSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLASGS
        ++TC  HL + S   L+ +   +ITC  HL + S   +  +   ++T    L + S   +      ++TC  HL + S   L+     ++TC   L + S
Subjt:  MVTCPSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLASGS
TrEMBL top hitse value%identityAlignment
A0A7S4AVG6 Hypothetical protein1.0e-0836.36Show/hide
Query:  PSHLA--SGSDQPLIQAEFRMIT--CPSHLASGSDQPLIQAEFRMVT--CPSHLASGSDQPLIQVEFRMVT--CPSHLASGSDQPLIQVEFRMVT--CPS
        PSH +  SG D PL++ EF  ++   PSH  +G    L++ EF  V+   PSH  +G   PL++ EF  V    PS+   G   PL++ EF  V+   PS
Subjt:  PSHLA--SGSDQPLIQAEFRMIT--CPSHLASGSDQPLIQAEFRMVT--CPSHLASGSDQPLIQVEFRMVT--CPSHLASGSDQPLIQVEFRMVT--CPS

Query:  DLASGSDQPL
           +G   PL
Subjt:  DLASGSDQPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACTTGTCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACC
CCTGATTCAGGCGGAATTCAGGATGGTCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGTGGAATTCAGGATGGTCACTTGCCCTTCACATC
TTGCCTCAGGCAGTGATCAACCCCTGATTCAGGTGGAATTCAGGATGGTCACTTGCCCTTCAGATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTAAGG
ATGGCGGACTGCAGGTTGGTCACTTGCCCACTTGCACTGCCAACCTTTGAAGATGAAGCGAGGTCATCAATCGCCGACTTTGGAGATGAAGCGATGCCGTCAACCGCCAA
CTTTGAGGATCAAGCGAGGCCGAAGCCGTCAACCGTCAACCTTGAAGATGAAGCAAAGTTAGAGCAACAACTCTTAGAGACAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCACTTGTCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACC
CCTGATTCAGGCGGAATTCAGGATGGTCACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGTGGAATTCAGGATGGTCACTTGCCCTTCACATC
TTGCCTCAGGCAGTGATCAACCCCTGATTCAGGTGGAATTCAGGATGGTCACTTGCCCTTCAGATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTAAGG
ATGGCGGACTGCAGGTTGGTCACTTGCCCACTTGCACTGCCAACCTTTGAAGATGAAGCGAGGTCATCAATCGCCGACTTTGGAGATGAAGCGATGCCGTCAACCGCCAA
CTTTGAGGATCAAGCGAGGCCGAAGCCGTCAACCGTCAACCTTGAAGATGAAGCAAAGTTAGAGCAACAACTCTTAGAGACAAAATAA
Protein sequenceShow/hide protein sequence
MVTCPSHLASGSDQPLIQAEFRMITCPSHLASGSDQPLIQAEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSHLASGSDQPLIQVEFRMVTCPSDLASGSDQPLIQAELR
MADCRLVTCPLALPTFEDEARSSIADFGDEAMPSTANFEDQARPKPSTVNLEDEAKLEQQLLETK