; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006540 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006540
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr6:43411461..43413456
RNA-Seq ExpressionLag0006540
SyntenyLag0006540
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3490037.1 reverse transcriptase [Gossypium australe]1.1e-3127.63Show/hide
Query:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKN-----------------------LVSANAAEFG--VFKGILQDYEQASGQ--
        +S+ LN +   +F+PSRGLRQGDPLSPYLFL+C++G S+LL +A ++                        ++  +A   G    + I+Q+YE  +GQ  
Subjt:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKN-----------------------LVSANAAEFG--VFKGILQDYEQASGQ--

Query:  -----CVN-FNKPVV-----------CFSPSVTH-------DQSSYLSHILAMKVDD--VQLISSIPISGGAL-DSWVWHFERHDHYTVRSGYKAHMLCK
              VN +N P +              PS TH       D +++   ++   VD+     I SIPI+     D+ VW  +    YTV+SGY+      
Subjt:  -----CVN-FNKPVV-----------CFSPSVTH-------DQSSYLSHILAMKVDD--VQLISSIPISGGAL-DSWVWHFERHDHYTVRSGYKAHMLCK

Query:  LKGS--SSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQ
           +  SSN +    ++K+L  L +P K K  VWR F+N +P + NL+ + + A   CPLC    + +NH ++ CS  K +W  L  +I   E  +   Q
Subjt:  LKGS--SSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQ

Query:  DRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDF--HIANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGV
          F  +     +       +  W LW+ RN ++H      L+D   +IQGY ++   +       + P+      R  +  ++ ++ DA+   + ++   
Subjt:  DRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDF--HIANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGV

Query:  GVVVRNSGG
         VV R + G
Subjt:  GVVVRNSGG

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]1.8e-3434.51Show/hide
Query:  DDVQLISSIP-ISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCP
        DD  LI S+P +S    DS  WHF++   YTVRSGYK  +  K KG  S+S  L  WW+ LW   +P K K F W+ F+  +P    L  R VD   +C 
Subjt:  DDVQLISSIP-ISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCP

Query:  LCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEI---DYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFH
        +C    ++  H L+ C+ A  +WR L G   I+ I   D+PSI    LSL             +G W LW +RN+V+HG +  +  D   WI  +  +F 
Subjt:  LCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEI---DYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFH

Query:  IANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVA
        +AN  N+      +   +        ++ DAS    S   GVGV++R+  GS +A
Subjt:  IANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVA

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.3e-4024.78Show/hide
Query:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKN-------------------------LVSANAAEFGVFKGILQDYEQASGQCV
        FSI LNG     F PSRG+RQGDPLSPYLFLLC++GLS+L+   +                             + +  +E    + +L  Y +ASGQC+
Subjt:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKN-------------------------LVSANAAEFGVFKGILQDYEQASGQCV

Query:  NFNKPVVCFSPSVTHDQSSYLSHILAMKV-----------------------------------------------------------------------
        NF+K  + FSP+V  ++  YL  IL +K+                                                                       
Subjt:  NFNKPVVCFSPSVTHDQSSYLSHILAMKV-----------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------------------DD
                                                                                                          +D
Subjt:  --------------------------------------------------------------------------------------------------DD

Query:  VQLISSIPISGGAL-DSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLC
          LI S+PIS   L DSW+WH+++  +Y+VRSGYK +M  K   +S+++      W ++W L +PTK K F+WR+ H  IP   NL+ R +     C +C
Subjt:  VQLISSIPISGGAL-DSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLC

Query:  QKHPKTTNHALFRCSRAKRLWRMLFGKI-AIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFHIANV
            ++  HA F C RA+++WR LF  +  +   D  S  + + SL +      L  A +  W +WNDRN+++HGK V  ++ KC W+  ++ D H    
Subjt:  QKHPKTTNHALFRCSRAKRLWRMLFGKI-AIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFHIANV

Query:  CNNISPAKDRFH---IRHLDPQMMV---VHVDASCNDHSRMCGVGVVVRNSGGSLVA
         +N SP     H   +++  P   V   ++ DA+C   S     G ++R+S  SLVA
Subjt:  CNNISPAKDRFH---IRHLDPQMMV---VHVDASCNDHSRMCGVGVVVRNSGGSLVA

XP_030498035.1 uncharacterized protein LOC115713693 [Cannabis sativa]5.6e-3328.04Show/hide
Query:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLL-LEASRKNLV-------------------------SANAAEFGVFKGILQDYEQASGQC
        FS  LNGE     TPSRGLRQGDPLSPYLF +C +GLS LL  E S  NL                          ++N++   + + +L  Y +AS Q 
Subjt:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLL-LEASRKNLV-------------------------SANAAEFGVFKGILQDYEQASGQC

Query:  VNFNKPVVCFSPSVTHDQSSYLSHILAMKV----------------DDVQLISSIP--------------ISGGALDSWV----W---------------
        +N +K V+ FSPS       +    L M +                D  +L SSI                S G +++ +    W               
Subjt:  VNFNKPVVCFSPSVTHDQSSYLSHILAMKV----------------DDVQLISSIP--------------ISGGALDSWV----W---------------

Query:  --HFERHDHYTVRSGYKAHML---------CKLK------GSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKH
          +F          G+   +          C  K      G  S S S +  WK  W L+LP+K K F WR   N +P+   L  + V  +A C LC + 
Subjt:  --HFERHDHYTVRSGYKAHML---------CKLK------GSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKH

Query:  PKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFHIAN-----
         ++  HALF+C  AK +WR     I   +       D    L        LE   V  W +W DRN + HG+S        N+   Y++++H AN     
Subjt:  PKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFHIAN-----

Query:  VCNNISPAK------DRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVATM
        V   ++PA+      +    +  D   + ++VDA+ N  S++ GVG +VRN  G ++A M
Subjt:  VCNNISPAK------DRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVATM

XP_030946032.1 uncharacterized protein LOC115970553 [Quercus lobata]3.1e-3125.21Show/hide
Query:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKNLVSANAAEFGVFKGILQDYEQASGQCVNFNKPVVCFSPSVTHDQSSYLSHIL
        +SIL+NGE +    PSRGLRQGDPLSPYLFLLCS+GL+ +L  A+ ++       +  V + IL  YE+ASGQ +N  K  + FS +V  D  + LS+ L
Subjt:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKNLVSANAAEFGVFKGILQDYEQASGQCVNFNKPVVCFSPSVTHDQSSYLSHIL

Query:  AM-----------------------------------------------------KVDDVQLISSI---------------PISGGALDSWV--------
         +                                                     ++ + + I+                 P SGG   +WV        
Subjt:  AM-----------------------------------------------------KVDDVQLISSI---------------PISGGALDSWV--------

Query:  -----------------------------------WHFERHDHYTVRSGYKAHMLCKLK----GSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCI
                                           W   +  +Y+V++GY+  +LC+ +     SSS+S     +WK +W L++P K K F+WR   N +
Subjt:  -----------------------------------WHFERHDHYTVRSGYKAHMLCKLK----GSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCI

Query:  PMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQD--RFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVP
        P   NL  R +  +A C  C    +   +A++ C + + +W   F  +   + ++P I D    +SL+    D  LE   V AW +WN RN ++  +   
Subjt:  PMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQD--RFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVP

Query:  SLKDKCNWIQGYIKDFHIANVCNNISPAKDRFHIRHLDP--QMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVATM
        +          Y+ +F +       +P   + H+R   P  +    + D +    S   G+GVVVRN+ G ++A +
Subjt:  SLKDKCNWIQGYIKDFHIANVCNNISPAKDRFHIRHLDP--QMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVATM

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein8.5e-3534.51Show/hide
Query:  DDVQLISSIP-ISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCP
        DD  LI S+P +S    DS  WHF++   YTVRSGYK  +  K KG  S+S  L  WW+ LW   +P K K F W+ F+  +P    L  R VD   +C 
Subjt:  DDVQLISSIP-ISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCP

Query:  LCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEI---DYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFH
        +C    ++  H L+ C+ A  +WR L G   I+ I   D+PSI    LSL             +G W LW +RN+V+HG +  +  D   WI  +  +F 
Subjt:  LCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEI---DYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFH

Query:  IANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVA
        +AN  N+      +   +        ++ DAS    S   GVGV++R+  GS +A
Subjt:  IANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVA

A0A6J1DX30 uncharacterized protein LOC1110248746.1e-4124.78Show/hide
Query:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKN-------------------------LVSANAAEFGVFKGILQDYEQASGQCV
        FSI LNG     F PSRG+RQGDPLSPYLFLLC++GLS+L+   +                             + +  +E    + +L  Y +ASGQC+
Subjt:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKN-------------------------LVSANAAEFGVFKGILQDYEQASGQCV

Query:  NFNKPVVCFSPSVTHDQSSYLSHILAMKV-----------------------------------------------------------------------
        NF+K  + FSP+V  ++  YL  IL +K+                                                                       
Subjt:  NFNKPVVCFSPSVTHDQSSYLSHILAMKV-----------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------------------DD
                                                                                                          +D
Subjt:  --------------------------------------------------------------------------------------------------DD

Query:  VQLISSIPISGGAL-DSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLC
          LI S+PIS   L DSW+WH+++  +Y+VRSGYK +M  K   +S+++      W ++W L +PTK K F+WR+ H  IP   NL+ R +     C +C
Subjt:  VQLISSIPISGGAL-DSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLC

Query:  QKHPKTTNHALFRCSRAKRLWRMLFGKI-AIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFHIANV
            ++  HA F C RA+++WR LF  +  +   D  S  + + SL +      L  A +  W +WNDRN+++HGK V  ++ KC W+  ++ D H    
Subjt:  QKHPKTTNHALFRCSRAKRLWRMLFGKI-AIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFHIANV

Query:  CNNISPAKDRFH---IRHLDPQMMV---VHVDASCNDHSRMCGVGVVVRNSGGSLVA
         +N SP     H   +++  P   V   ++ DA+C   S     G ++R+S  SLVA
Subjt:  CNNISPAKDRFH---IRHLDPQMMV---VHVDASCNDHSRMCGVGVVVRNSGGSLVA

A0A803P3Q4 Uncharacterized protein1.7e-4332.01Show/hide
Query:  TPSRGLRQGDPLSPYLFLLCSQGLSSLL------------LEASRKNLVS-------------ANAAEFGVFKGILQDYEQASGQCVNFNKPVVCFSPSV
        TP RGLRQGDPLSPYLFL+CS+GLS LL            + + R  ++S             A+    GV K  L  Y +ASGQ +N +K V+ FSP+ 
Subjt:  TPSRGLRQGDPLSPYLFLLCSQGLSSLL------------LEASRKNLVS-------------ANAAEFGVFKGILQDYEQASGQCVNFNKPVVCFSPSV

Query:  THDQSSYLSHILAMKVDDV-QLISSIPISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGS--SSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCI
             S   +IL M + +  +    +P        W+WHF     Y+V++ Y  H    L+ S  S+ S +   WWK  W L+LP+K K F W+ FH  I
Subjt:  THDQSSYLSHILAMKVDDV-QLISSIPISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGS--SSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCI

Query:  PMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSV---
        P   +L +R +  +A C LC    +   HA+F C  AK++W+          +      D  + L      + +E      W LWNDRNN +HGK V   
Subjt:  PMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSV---

Query:  -----PSLKDKCNWIQGYIKDFHIANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVA
              S    CN+ Q +    H +   +  + A  ++  +H       ++VDA+C+      GVG+++RNS   +VA
Subjt:  -----PSLKDKCNWIQGYIKDFHIANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVA

A0A803P5H2 Uncharacterized protein1.1e-3930.29Show/hide
Query:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLL-----------LEASRKN--------------LVSANAAEFGVFKGILQDYEQASGQCV
        FS L+NGE      P RGLRQGDPLSPYLFL+CS+GLS LL           L  SR +                 AN    G  K  L  Y +ASGQ +
Subjt:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLL-----------LEASRKN--------------LVSANAAEFGVFKGILQDYEQASGQCV

Query:  NFNKP----------------------VVC----------------FSPSVTHDQSSYLSHILAMKVD---------DVQLISSIPIS-GGALDSWVWHF
        N +K                       V C                F+ S ++  + Y++      ++         D+  I +IP+S     D W WH+
Subjt:  NFNKP----------------------VVC----------------FSPSVTHDQSSYLSHILAMKVD---------DVQLISSIPIS-GGALDSWVWHF

Query:  ERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWR
        +    YTV+SGY      + K +SS+S S   WW+  W L LP+K + F WR  ++ +P+  NL  R V  +A C LC +  ++  HALF C  AK +W+
Subjt:  ERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWR

Query:  MLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFH
            ++   +  +    D  L L      + LE      W +W+DRNN +HGK +       +  + Y+ +FH
Subjt:  MLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFH

A0A803PDG2 Uncharacterized protein2.9e-3530.23Show/hide
Query:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASR------KNLVSANAA-----EFGVFK------GILQDYEQASGQCVNFNKPVVC
        FS  LNGE      PSRGLRQGDPLSPYLFL+CS+GLS LL           ++ V  N A      + +F+        L  Y   S    +F +  + 
Subjt:  FSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASR------KNLVSANAA-----EFGVFK------GILQDYEQASGQCVNFNKPVVC

Query:  FSPSVTHDQSSYLSHILAMKVDDVQLISSIPISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHN
         SPS+T     +   +L   +          +  G +DS +WH      YTV+SG+      +     S+S S + WWK  W L+LP+K K F WR   N
Subjt:  FSPSVTHDQSSYLSHILAMKVDDVQLISSIPISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHN

Query:  CIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVP
        C+P+   L  + V  +A C LC +  ++  HALF+C+ AK +WR     I   +       D    L        LE   V  W +W D+  + HG+S  
Subjt:  CIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVP

Query:  SLKDKCNWIQGYIKDF-----HIANVCNNISPAKDR--------FHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVATM
              N+   Y+ ++     H   V     PA           + +R++    +  +VDA+ N  S++ GVG +V+N  G ++  M
Subjt:  SLKDKCNWIQGYIKDF-----HIANVCNNISPAKDR--------FHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVATM

SwissProt top hitse value%identityAlignment
P92555 Uncharacterized mitochondrial protein AtMg012504.2e-0750Show/hide
Query:  GNAFCFFCFFSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRK
        G   C F +   ++NG  +   TPSRGLRQGDPLSPYLF+LC++ LS L   A  +
Subjt:  GNAFCFFCFFSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRK

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein7.9e-0926.45Show/hide
Query:  KTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWR---MLFGKIAIKEIDYPSIQDRFLSLLDDGPDNT
        + +W L +  K KHF+WR     +     L SR++DA+  C  C    +T +H +F C   + +WR   ++ G        +    +R + L      N+
Subjt:  KTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWR---MLFGKIAIKEIDYPSIQDRFLSLLDDGPDNT

Query:  LE-----WACVGAWTLWNDRN
        L+     W     W LW  RN
Subjt:  LE-----WACVGAWTLWNDRN

AT3G09510.1 Ribonuclease H-like superfamily protein9.0e-1325.29Show/hide
Query:  DSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLR------RWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNH
        D  +W++     YTVRSGY           S+N  ++            +W L +  K KHF+WR     +     L +R +  +  CP C +  ++ NH
Subjt:  DSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLR------RWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNH

Query:  ALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLE--------WACVGAWTLWNDRNNVMHGK
        ALF C  A   WR+    +   ++     ++   ++L+   D T+         W     W +W  RNNV+  K
Subjt:  ALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLE--------WACVGAWTLWNDRNNVMHGK

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.7e-0630.77Show/hide
Query:  WWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKR
        W   +W+L++  K K  +W+  +N +P+   L+SR++    +C  C+   +T  H LF C  A+R
Subjt:  WWKTLWALRLPTKTKHFVWRTFHNCIPMQVNLISRHVDANAWCPLCQKHPKTTNHALFRCSRAKR

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)3.0e-0850Show/hide
Query:  GNAFCFFCFFSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRK
        G   C F +   ++NG  +   TPSRGLRQGDPLSPYLF+LC++ LS L   A  +
Subjt:  GNAFCFFCFFSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTATCTGCGTCAAGTTTTGCTCCAGTTGGGTTTCCACTTAAAATGGACGAACCTGGTAATGCGTTTTGTTTCTTCTGCTTCTTTTCTATCCTTCTGAATGGGGA
AGCTAAATGCTATTTCACTCCATCGCGGGGACTTCGTCAAGGGGATCCACTCTCGCCATATTTATTTTTACTCTGTTCACAGGGCTTATCTTCCTTACTACTGGAGGCTT
CAAGAAAAAATTTGGTTTCAGCTAATGCTGCTGAGTTTGGTGTCTTTAAAGGAATCCTCCAGGATTACGAACAGGCTTCTGGGCAATGTGTTAATTTTAATAAACCCGTT
GTTTGTTTTTCACCCTCAGTTACTCATGACCAGTCATCCTACCTGAGCCATATCCTGGCCATGAAAGTGGATGATGTCCAACTGATTTCGTCCATACCGATCAGTGGTGG
GGCCCTTGATTCGTGGGTCTGGCACTTTGAGAGACATGACCATTATACAGTACGAAGTGGGTACAAAGCCCACATGCTATGTAAACTAAAGGGGTCGTCGTCAAATTCAG
AGAGCTTGAGAAGGTGGTGGAAGACACTTTGGGCTTTACGATTACCAACAAAAACAAAACATTTTGTGTGGCGAACTTTTCATAACTGCATTCCTATGCAAGTGAATTTA
ATTTCTCGGCATGTTGATGCTAATGCTTGGTGTCCCCTTTGTCAAAAGCATCCTAAGACAACAAATCATGCTTTATTCCGATGCTCGAGAGCTAAAAGACTGTGGAGAAT
GCTGTTTGGGAAGATTGCCATTAAGGAGATTGATTATCCATCTATCCAAGATCGTTTCTTATCACTGTTAGATGATGGTCCAGATAATACTTTGGAATGGGCTTGTGTGG
GTGCGTGGACACTATGGAATGACCGTAATAATGTGATGCATGGAAAATCTGTGCCTAGTCTAAAGGATAAATGTAACTGGATTCAAGGTTATATTAAGGATTTCCATATT
GCAAATGTTTGCAACAATATATCTCCTGCTAAGGATAGGTTCCACATTCGTCATTTGGATCCGCAGATGATGGTTGTTCATGTGGACGCATCGTGTAATGACCATAGTCG
TATGTGTGGAGTTGGAGTGGTTGTACGCAATAGTGGGGGGTCTCTTGTAGCGACGATGCATGGTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTATCTGCGTCAAGTTTTGCTCCAGTTGGGTTTCCACTTAAAATGGACGAACCTGGTAATGCGTTTTGTTTCTTCTGCTTCTTTTCTATCCTTCTGAATGGGGA
AGCTAAATGCTATTTCACTCCATCGCGGGGACTTCGTCAAGGGGATCCACTCTCGCCATATTTATTTTTACTCTGTTCACAGGGCTTATCTTCCTTACTACTGGAGGCTT
CAAGAAAAAATTTGGTTTCAGCTAATGCTGCTGAGTTTGGTGTCTTTAAAGGAATCCTCCAGGATTACGAACAGGCTTCTGGGCAATGTGTTAATTTTAATAAACCCGTT
GTTTGTTTTTCACCCTCAGTTACTCATGACCAGTCATCCTACCTGAGCCATATCCTGGCCATGAAAGTGGATGATGTCCAACTGATTTCGTCCATACCGATCAGTGGTGG
GGCCCTTGATTCGTGGGTCTGGCACTTTGAGAGACATGACCATTATACAGTACGAAGTGGGTACAAAGCCCACATGCTATGTAAACTAAAGGGGTCGTCGTCAAATTCAG
AGAGCTTGAGAAGGTGGTGGAAGACACTTTGGGCTTTACGATTACCAACAAAAACAAAACATTTTGTGTGGCGAACTTTTCATAACTGCATTCCTATGCAAGTGAATTTA
ATTTCTCGGCATGTTGATGCTAATGCTTGGTGTCCCCTTTGTCAAAAGCATCCTAAGACAACAAATCATGCTTTATTCCGATGCTCGAGAGCTAAAAGACTGTGGAGAAT
GCTGTTTGGGAAGATTGCCATTAAGGAGATTGATTATCCATCTATCCAAGATCGTTTCTTATCACTGTTAGATGATGGTCCAGATAATACTTTGGAATGGGCTTGTGTGG
GTGCGTGGACACTATGGAATGACCGTAATAATGTGATGCATGGAAAATCTGTGCCTAGTCTAAAGGATAAATGTAACTGGATTCAAGGTTATATTAAGGATTTCCATATT
GCAAATGTTTGCAACAATATATCTCCTGCTAAGGATAGGTTCCACATTCGTCATTTGGATCCGCAGATGATGGTTGTTCATGTGGACGCATCGTGTAATGACCATAGTCG
TATGTGTGGAGTTGGAGTGGTTGTACGCAATAGTGGGGGGTCTCTTGTAGCGACGATGCATGGTCAATGA
Protein sequenceShow/hide protein sequence
MDLSASSFAPVGFPLKMDEPGNAFCFFCFFSILLNGEAKCYFTPSRGLRQGDPLSPYLFLLCSQGLSSLLLEASRKNLVSANAAEFGVFKGILQDYEQASGQCVNFNKPV
VCFSPSVTHDQSSYLSHILAMKVDDVQLISSIPISGGALDSWVWHFERHDHYTVRSGYKAHMLCKLKGSSSNSESLRRWWKTLWALRLPTKTKHFVWRTFHNCIPMQVNL
ISRHVDANAWCPLCQKHPKTTNHALFRCSRAKRLWRMLFGKIAIKEIDYPSIQDRFLSLLDDGPDNTLEWACVGAWTLWNDRNNVMHGKSVPSLKDKCNWIQGYIKDFHI
ANVCNNISPAKDRFHIRHLDPQMMVVHVDASCNDHSRMCGVGVVVRNSGGSLVATMHGQ