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Lag0006571 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006571
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCyclin-H1-1
Genome locationchr6:43700527..43701676
RNA-Seq ExpressionLag0006571
SyntenyLag0006571
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150791.1 uncharacterized protein LOC111018854 [Momordica charantia]1.6e-3576.42Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA
        MA+FVS+SFSVP  + KEM P KL KV  VSSRAITGTASKLVLSCCSNKS+S   R+ HPLRVTSRPF G+VSFSS + V+ GYW+GPDVDDGWGYIEA
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA

Query:  FIDRIT
        FIDRIT
Subjt:  FIDRIT

XP_022946526.1 uncharacterized protein LOC111450562 [Cucurbita moschata]3.3e-3679.25Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA
        MASFVSLSFSVP  IFKEMPP KLAKVT V  RA  GTASK VLSCC+NKS+S N  NCHP+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYIEA
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA

Query:  FIDRIT
        F+DRIT
Subjt:  FIDRIT

XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]7.4e-3678.3Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA
        MASFVSLSFSVP  IFKEMPP KLAKVT V  RA  GTASK VLSCCSNKS+S N  NC P+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYIEA
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA

Query:  FIDRIT
         +DRIT
Subjt:  FIDRIT

XP_023545344.1 uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]3.9e-3779.25Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA
        MASFVSLSFSVP  IFKEMPP KLAKVT V  RA  GTAS  VLSCCSNKS+S N  NCHP+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYIEA
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA

Query:  FIDRIT
        F+DRIT
Subjt:  FIDRIT

XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]2.8e-3576.64Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGYIE
        MA+FVSLSFSVP P  KE+PP KL++VT VSSRA  GTASKLVLSCCSN S+S N +NCHP+R+T RPF GIVS SS +MV L+GYWVGPDVDDGWGYIE
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGYIE

Query:  AFIDRIT
        AFIDRIT
Subjt:  AFIDRIT

TrEMBL top hitse value%identityAlignment
A0A5A7U1B8 Uncharacterized protein8.5e-3072.9Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGYIE
        MASFVSLSFSVP    KE+PP KLAK T VS RA  GTASKLVL C S KS+S N  N   +R+TSRPF GIVS SS +MV L GYWVGPDVDDGWGYIE
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGYIE

Query:  AFIDRIT
        AFIDRIT
Subjt:  AFIDRIT

A0A5D3CPK7 Uncharacterized protein4.2e-2971.96Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGYIE
        MASFVSLSFSVP    KE+PP KLAK T VS RA  GTA KLVL C S KS+S N  N   +R+TSRPF GIVS SS +MV L GYWVGPDVDDGWGYIE
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGYIE

Query:  AFIDRIT
        AFIDRIT
Subjt:  AFIDRIT

A0A6J1DCK5 uncharacterized protein LOC1110188547.9e-3676.42Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA
        MA+FVS+SFSVP  + KEM P KL KV  VSSRAITGTASKLVLSCCSNKS+S   R+ HPLRVTSRPF G+VSFSS + V+ GYW+GPDVDDGWGYIEA
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA

Query:  FIDRIT
        FIDRIT
Subjt:  FIDRIT

A0A6J1G3X3 uncharacterized protein LOC1114505621.6e-3679.25Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA
        MASFVSLSFSVP  IFKEMPP KLAKVT V  RA  GTASK VLSCC+NKS+S N  NCHP+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYIEA
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA

Query:  FIDRIT
        F+DRIT
Subjt:  FIDRIT

A0A6J1K9Q0 uncharacterized protein LOC1114935483.6e-3678.3Show/hide
Query:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA
        MASFVSLSFSVP  IFKEMPP KLAKVT V  RA  GTASK VLSCCSNKS+S N  NC P+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYIEA
Subjt:  MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEA

Query:  FIDRIT
         +DRIT
Subjt:  FIDRIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTCGTTTCTCTGAGTTTCTCCGTTCCGCTGCCCATTTTCAAGGAAATGCCCCCATCGAAACTTGCCAAAGTTACAGAAGTTTCAAGCCGAGCAATTACTGG
AACAGCTTCAAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCGTATCTAAGAATGGGAGAAATTGCCATCCTTTGCGGGTAACTTCAAGACCTTTTTTGGGAATAGTTT
CTTTTAGTTCCGGGAGTATGGTATTAGCTGGCTATTGGGTAGGACCTGATGTTGATGACGGTTGGGGATATATAGAAGCTTTTATTGATCGGATTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCTTCGTTTCTCTGAGTTTCTCCGTTCCGCTGCCCATTTTCAAGGAAATGCCCCCATCGAAACTTGCCAAAGTTACAGAAGTTTCAAGCCGAGCAATTACTGG
AACAGCTTCAAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCGTATCTAAGAATGGGAGAAATTGCCATCCTTTGCGGGTAACTTCAAGACCTTTTTTGGGAATAGTTT
CTTTTAGTTCCGGGAGTATGGTATTAGCTGGCTATTGGGTAGGACCTGATGTTGATGACGGTTGGGGATATATAGAAGCTTTTATTGATCGGATTACTTAA
Protein sequenceShow/hide protein sequence
MASFVSLSFSVPLPIFKEMPPSKLAKVTEVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYIEAFIDRIT