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Lag0006638 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006638
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGATA transcription factor
Genome locationchr6:44435948..44436262
RNA-Seq ExpressionLag0006638
SyntenyLag0006638
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044768.1 GATA transcription factor 5-like [Cucumis melo var. makuwa]8.6e-1372.06Show/hide
Query:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        SS + S  EE+LE+D SVSPPE  FKTP+PV ARSK  RT  RVWCL SPSLT SSS STTSSSSSSP
Subjt:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
KAG7015332.1 GATA transcription factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1265.82Show/hide
Query:  PLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSS
        P   +SSL+   SS  S+A ++K  +  S+SPPE  FKTP+PV ARSK TRTG RVWCLASPSLT+SSSSSTTSSSSSS
Subjt:  PLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSS
TYK16696.1 GATA transcription factor 5-like [Cucumis melo var. makuwa]1.0e-1373.53Show/hide
Query:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        SS + S  EE+LE+D SVSPPEP FKTP+PV ARSK  RT  RVWCL SPSLT SSS STTSSSSSSP
Subjt:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
XP_008465634.1 PREDICTED: GATA transcription factor 5-like [Cucumis melo]4.6e-1471.83Show/hide
Query:  LFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        L  SS + S  EE+LE+D SVSPPEP FKTP+PV ARSK  RT  RVWCL SPSLT SSS STTSSSSSSP
Subjt:  LFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
XP_038876782.1 GATA transcription factor 5-like [Benincasa hispida]6.0e-1464.63Show/hide
Query:  SPPLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        S P  S     L  SS +++  EE+LE D SVSPPEP FKTP+PV ARSK TR   RVWCL SPSLT+SSS STTSSSSSSP
Subjt:  SPPLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
TrEMBL top hitse value%identityAlignment
A0A1S3CPB9 GATA transcription factor2.2e-1471.83Show/hide
Query:  LFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        L  SS + S  EE+LE+D SVSPPEP FKTP+PV ARSK  RT  RVWCL SPSLT SSS STTSSSSSSP
Subjt:  LFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
A0A5A7TPF0 GATA transcription factor 5-like4.2e-1372.06Show/hide
Query:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        SS + S  EE+LE+D SVSPPE  FKTP+PV ARSK  RT  RVWCL SPSLT SSS STTSSSSSSP
Subjt:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
A0A5D3D1W9 GATA transcription factor 5-like4.9e-1473.53Show/hide
Query:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        SS + S  EE+LE+D SVSPPEP FKTP+PV ARSK  RT  RVWCL SPSLT SSS STTSSSSSSP
Subjt:  SSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
A0A6J1ENF7 GATA transcription factor5.4e-1365.82Show/hide
Query:  PLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSS
        P   +SSL+   SS  S+A ++K  +  S+SPPE  FKTP+PV ARSK TRTG RVWCLASPSLT+SSSSSTTSSSSSS
Subjt:  PLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSS
A0A6J1JC71 GATA transcription factor7.1e-1365.82Show/hide
Query:  PLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSS
        P   +SSL+   SS  S+A +++  N  S+SPPE  FKTP+PV ARSK TRTG RVWCLASPSLT+SSSSSTTSSSSSS
Subjt:  PLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66320.1 GATA transcription factor 51.6e-0457.45Show/hide
Query:  EPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        E  FK+PVP  ARSK  R G +VW L S S +  SSS +TSSSSS P
Subjt:  EPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
AT5G66320.2 GATA transcription factor 51.6e-0457.45Show/hide
Query:  EPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP
        E  FK+PVP  ARSK  R G +VW L S S +  SSS +TSSSSS P
Subjt:  EPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCGCCGCCCTCCAACACCTCTCTCTCCTCTCTCCCCCACTTCACTCTCTCTCCTCACTCCTTCTCTTCTCTTCGTCGATGAAATCGTCCGCCGCGGA
GGAGAAACTGGAGAACGACGATTCTGTTTCGCCACCGGAGCCCTATTTCAAGACGCCCGTTCCGGTCATGGCTCGAAGCAAATGGACGAGAACCGGCAGCCGAGTTTGGT
GCCTCGCTTCACCGTCGTTGACCAAGTCTTCCTCCAGTTCCACAACGTCCTCCTCTTCCTCGTCGCCGGGAAGGGTGGCAGCGGCAAGGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCCGCCGCCCTCCAACACCTCTCTCTCCTCTCTCCCCCACTTCACTCTCTCTCCTCACTCCTTCTCTTCTCTTCGTCGATGAAATCGTCCGCCGCGGA
GGAGAAACTGGAGAACGACGATTCTGTTTCGCCACCGGAGCCCTATTTCAAGACGCCCGTTCCGGTCATGGCTCGAAGCAAATGGACGAGAACCGGCAGCCGAGTTTGGT
GCCTCGCTTCACCGTCGTTGACCAAGTCTTCCTCCAGTTCCACAACGTCCTCCTCTTCCTCGTCGCCGGGAAGGGTGGCAGCGGCAAGGGTTTAG
Protein sequenceShow/hide protein sequence
MAAAAAALQHLSLLSPPLHSLSSLLLFSSSMKSSAAEEKLENDDSVSPPEPYFKTPVPVMARSKWTRTGSRVWCLASPSLTKSSSSSTTSSSSSSPGRVAAARV