; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006655 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006655
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr6:44570324..44571794
RNA-Seq ExpressionLag0006655
SyntenyLag0006655
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-5952.4Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEA---
        MFLV+L+  + L +A SLL+QI+ +AD++FT   LS+IA  SH S  F ATLQ+  R FT YSVDH ++++VSLESF   +LDG SFSS++IH+LE+   
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEA---

Query:  ISLTFES-SSGSTSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF
        + L +E+ SS    LH EL  SP Q E LGQV  GK+F + SK LR+II E   F +DLV V  T ++VKFSI SKEI +TKE   C IVG+EGEDET+ 
Subjt:  ISLTFES-SSGSTSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF

Query:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYFPQM
         IT  PM FF++ TYK N +WF+KT +S+SV+S   F +Y +Y +YFP++
Subjt:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYFPQM

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]4.6e-4954.13Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-
        MFLV+LE  + L +A SLL+Q+A +AD+KFTP  L II   S+ S  F ATLQL +R FT +SVDH+ +++VSL+ F   +LDG SFSS+TIHLL+  + 
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-

Query:  --LTFESSSGST-SLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF
          L FE+ S     LH EL  SP Q E LGQV  G +F + S++LRRII E   F +D V VT+T SQVKFSI SKEIILTKE   C IVG+EGE ET+ 
Subjt:  --LTFESSSGST-SLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF

Query:  QITLHPMSFFIDLTYKGN
        Q+ L PM FF++ TY+ N
Subjt:  QITLHPMSFFIDLTYKGN

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]8.4e-5149.8Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-
        MFLV+L + D L  A SLL+QI++EADLKF+ S+ S+I   S+ S  F AT Q+  RFF  YSVD +H++RVSL+SF   + DG  FSS+TIH  E  S 
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-

Query:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF
          L FESS+ +   +HR L  SPSQ EELGQ+   ++F+I S+D R II     F  + ++V+LT S+VKF   S+E ILTKE   C I+G+EGE E  F
Subjt:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF

Query:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF
        QI L+P  FF +L+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF

XP_023548334.1 uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo]3.2e-5049.8Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-
        MFLV+L + D L  A S+L+QI+ EADLKF+ S+ S+I   S+ SL F AT Q+  RFF  Y VD +H++RVSL+SF   +  G  FSS+TIH  E  S 
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-

Query:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF
          L FESS+ +   +HR L  SPSQ EELGQ+   ++F+I S+D R I+     F  D ++V+LT SQVKF   S+E ILTKE   CVIVG+EG+ E  F
Subjt:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF

Query:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF
        QI L+P  FF +L+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]5.5e-5051.38Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLE---A
        MFLVKL N + L +A S L+QI++ AD+KFTP E  +IA   + S  F ATLQL ++ FT YSVDH HT++V LESF   +LDG SF+S+TIHLLE    
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLE---A

Query:  ISLTFES-SSGSTSLHRELMFSPSQGEEL---GQVVRGKYFAIYSKDLRRIIMEFSHFQED-LVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGED
        + L F++ SS    LH EL FSP Q  +    GQ+  GK+F + S+ LRRII E   FQ+D +V V +T SQ+KFSI SKEI+L  +   C IVG E E 
Subjt:  ISLTFES-SSGSTSLHRELMFSPSQGEEL---GQVVRGKYFAIYSKDLRRIIMEFSHFQED-LVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGED

Query:  ETQFQITLHPMSFFIDLTYKGNMIWFHKTA-DSRSVLSTQVFQLYAEYAIYFP
        ETQFQI L PM FF++ TYK N +WF+KT  +S SV++   F +  +Y IYFP
Subjt:  ETQFQITLHPMSFFIDLTYKGNMIWFHKTA-DSRSVLSTQVFQLYAEYAIYFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980102.2e-4954.13Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-
        MFLV+LE  + L +A SLL+Q+A +AD+KFTP  L II   S+ S  F ATLQL +R FT +SVDH+ +++VSL+ F   +LDG SFSS+TIHLL+  + 
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-

Query:  --LTFESSSGST-SLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF
          L FE+ S     LH EL  SP Q E LGQV  G +F + S++LRRII E   F +D V VT+T SQVKFSI SKEIILTKE   C IVG+EGE ET+ 
Subjt:  --LTFESSSGST-SLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF

Query:  QITLHPMSFFIDLTYKGN
        Q+ L PM FF++ TY+ N
Subjt:  QITLHPMSFFIDLTYKGN

A0A1S3CL88 uncharacterized protein LOC1035022507.2e-4850.59Show/hide
Query:  MFLVKLENSDLLENAASLLSQIA-SEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS
        MFLVKL+N D L +A S L+QI+   ADLKFTPS+  IIA  SH S  F ATLQL  ++FT +SVD+ H+++VSLESF   +LDG SF+S+TIHLL+  +
Subjt:  MFLVKLENSDLLENAASLLSQIA-SEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS

Query:  ---LTFES-SSGSTSLHRELMFSPSQGE--ELGQ--VVRGKYFAIYSKDLRRIIMEFSHFQED-LVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEG
           L F++ SS    LH EL  SP Q E  ++GQ  +   KYF + SK LRRII +   FQ D ++ V +T S+VKFSI SKEIILT E   C I G E 
Subjt:  ---LTFES-SSGSTSLHRELMFSPSQGE--ELGQ--VVRGKYFAIYSKDLRRIIMEFSHFQED-LVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEG

Query:  EDETQFQITLHPMSFFIDLTYKGNMIWFHKTADSR-SVLSTQVFQLYAEYAIYFP
        E ETQFQI L PM FF++ TYK N +WF+KT ++  +++    + ++ +Y IYFP
Subjt:  EDETQFQITLHPMSFFIDLTYKGNMIWFHKTADSR-SVLSTQVFQLYAEYAIYFP

A0A6J1DM64 uncharacterized protein LOC1110222792.8e-4444.4Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHL---LEA
        MF ++L + D + NA S+L+Q+++ AD  F+    SII    + S  F ATLQ+ + FF+ YSVD +   R+ + SFR  +L+G  F S+T+H       
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHL---LEA

Query:  ISLTFESSSGSTSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQFQ
        + L FES S  T L R+L  S SQ ++LG V + K+F+I+S D RRII E + +    ++ TLT SQV+F I  +EI+LTKE   CVI G++G  E QFQ
Subjt:  ISLTFESSSGSTSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQFQ

Query:  ITLHPMSFFIDLTYKGNMIWFHKTADSRS-VLSTQVFQLYAEYAIYFPQM
        ++L PM FFI+L+Y+   IWF KT +SRS V+    F  YA+Y IYFPQ+
Subjt:  ITLHPMSFFIDLTYKGNMIWFHKTADSRS-VLSTQVFQLYAEYAIYFPQM

A0A6J1H2Z8 uncharacterized protein LOC1114600112.9e-4948.99Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-
        MFLV+L + D L  A S+L+QI++EADLKF+ S+ S+I S   H   F AT Q+  RFF  Y VD +H++RVSL+SF   +  G  FSS+TIH  E  S 
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-

Query:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF
          L FESS+ +   +HR L  SPSQ EELGQ+   ++F+I S+D R II     F  + ++V+LT S+VKF   S+E ILTKE   CVIVG+EG+ E  F
Subjt:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF

Query:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF
        QI L+P  FF +L+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF

A0A6J1KZ05 uncharacterized protein LOC1114988874.1e-5149.8Show/hide
Query:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-
        MFLV+L + D L  A SLL+QI++EADLKF+ S+ S+I   S+ S  F AT Q+  RFF  YSVD +H++RVSL+SF   + DG  FSS+TIH  E  S 
Subjt:  MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAIS-

Query:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF
          L FESS+ +   +HR L  SPSQ EELGQ+   ++F+I S+D R II     F  + ++V+LT S+VKF   S+E ILTKE   C I+G+EGE E  F
Subjt:  --LTFESSSGS-TSLHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQF

Query:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF
        QI L+P  FF +L+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  QITLHPMSFFIDLTYKGNMIWFHKTADSRSVLSTQVFQLYAEYAIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTAAAGCTCGAGAACTCTGATCTTCTTGAAAATGCAGCCTCCTTACTCTCTCAAATCGCCAGCGAAGCCGACCTCAAATTCACACCGTCGGAGCTCTCCAT
AATCGCTTCACAGTCCCACCATTCCCTTCCCTTCGCCGCAACGCTGCAATTGAGAAAGCGATTCTTCACCAAGTATTCCGTGGATCACAGCCACACTGCCAGAGTTTCCC
TTGAATCCTTCCGCCAAGTTCTGTTGGACGGCGCAAGTTTTTCTTCACTCACCATTCATCTTCTTGAAGCCATTTCCCTTACGTTTGAGAGTTCGAGTGGTTCGACAAGC
TTGCATCGTGAATTGATGTTCTCGCCTTCGCAAGGGGAGGAATTAGGCCAAGTTGTACGTGGGAAATATTTTGCAATTTATTCTAAAGATTTAAGACGCATTATAATGGA
ATTCTCTCACTTTCAAGAAGATTTAGTTTATGTTACACTTACAAAGTCACAAGTGAAGTTTTCTATTCCATCTAAGGAGATTATTCTTACTAAAGAGGTTGATGAATGTG
TAATTGTAGGTCATGAAGGAGAAGACGAAACTCAATTCCAAATCACTCTCCATCCCATGTCATTTTTCATTGATCTGACATATAAAGGGAATATGATATGGTTTCATAAA
ACAGCTGATTCTCGCAGCGTACTCAGTACCCAAGTTTTTCAATTGTATGCTGAATATGCGATCTATTTTCCTCAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTAAAGCTCGAGAACTCTGATCTTCTTGAAAATGCAGCCTCCTTACTCTCTCAAATCGCCAGCGAAGCCGACCTCAAATTCACACCGTCGGAGCTCTCCAT
AATCGCTTCACAGTCCCACCATTCCCTTCCCTTCGCCGCAACGCTGCAATTGAGAAAGCGATTCTTCACCAAGTATTCCGTGGATCACAGCCACACTGCCAGAGTTTCCC
TTGAATCCTTCCGCCAAGTTCTGTTGGACGGCGCAAGTTTTTCTTCACTCACCATTCATCTTCTTGAAGCCATTTCCCTTACGTTTGAGAGTTCGAGTGGTTCGACAAGC
TTGCATCGTGAATTGATGTTCTCGCCTTCGCAAGGGGAGGAATTAGGCCAAGTTGTACGTGGGAAATATTTTGCAATTTATTCTAAAGATTTAAGACGCATTATAATGGA
ATTCTCTCACTTTCAAGAAGATTTAGTTTATGTTACACTTACAAAGTCACAAGTGAAGTTTTCTATTCCATCTAAGGAGATTATTCTTACTAAAGAGGTTGATGAATGTG
TAATTGTAGGTCATGAAGGAGAAGACGAAACTCAATTCCAAATCACTCTCCATCCCATGTCATTTTTCATTGATCTGACATATAAAGGGAATATGATATGGTTTCATAAA
ACAGCTGATTCTCGCAGCGTACTCAGTACCCAAGTTTTTCAATTGTATGCTGAATATGCGATCTATTTTCCTCAAATGTGA
Protein sequenceShow/hide protein sequence
MFLVKLENSDLLENAASLLSQIASEADLKFTPSELSIIASQSHHSLPFAATLQLRKRFFTKYSVDHSHTARVSLESFRQVLLDGASFSSLTIHLLEAISLTFESSSGSTS
LHRELMFSPSQGEELGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLVYVTLTKSQVKFSIPSKEIILTKEVDECVIVGHEGEDETQFQITLHPMSFFIDLTYKGNMIWFHK
TADSRSVLSTQVFQLYAEYAIYFPQM