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Lag0006746 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006746
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationchr6:45508733..45512724
RNA-Seq ExpressionLag0006746
SyntenyLag0006746
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599313.1 Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1375.44Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        +G  S    + VTN ETGAQQTVRIVD+C+NGGLDLDVGVF+S+DTDGNGNANGFLT
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

XP_022143020.1 pathogenesis-related protein PR-4-like [Momordica charantia]1.3e-1376.79Show/hide
Query:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        G  S    + VTN ETGAQQTVRIVD+C NGGLDLDVGVFQS+DT+GNGNANGFLT
Subjt:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

XP_022946139.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.7e-1375.44Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        +G  S    + VTN ETGAQQ VRIVD+C+NGGLDLDVGVFQS+DTDGNGNANGFLT
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

XP_022999104.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]1.3e-1376.79Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL
        +G  S    + VTN ETGAQQTVRIVD+C+NGGLDLDVGVFQS+DTDGNGNANGFL
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL

XP_023545388.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]2.2e-1375.44Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        +G  S    + VTN ET AQQTVRIVD+C+NGGLDLDVGVFQS+DTDGNGNANGFLT
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

TrEMBL top hitse value%identityAlignment
A0A0A0LG74 Barwin domain-containing protein1.8e-1386.96Show/hide
Query:  VTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        VTN++TGAQQTVRIVD+C NGGLDLDVGVFQS+DTDGNG ANGFLT
Subjt:  VTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

A0A5D3D4F5 Pathogenesis-related protein PR-4-like1.1e-1384.78Show/hide
Query:  VTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        VTN++TG Q+TVRIVD+C NGGLDLDVGVFQS+DTDGNGNANGFLT
Subjt:  VTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

A0A6J1CMK0 pathogenesis-related protein PR-4-like6.3e-1476.79Show/hide
Query:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        G  S    + VTN ETGAQQTVRIVD+C NGGLDLDVGVFQS+DT+GNGNANGFLT
Subjt:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

A0A6J1G2Y5 pathogenesis-related protein PR-4-like8.3e-1475.44Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        +G  S    + VTN ETGAQQ VRIVD+C+NGGLDLDVGVFQS+DTDGNGNANGFLT
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

A0A6J1KG47 pathogenesis-related protein PR-4-like6.3e-1476.79Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL
        +G  S    + VTN ETGAQQTVRIVD+C+NGGLDLDVGVFQS+DTDGNGNANGFL
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL

SwissProt top hitse value%identityAlignment
P02877 Pro-hevein7.0e-1057.14Show/hide
Query:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT
        G +S    + VTN  TGA+ TVRIVD+C NGGLDLDV VF+ +DTDG G   G +T
Subjt:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLT

P09761 Wound-induced protein WIN11.2e-1266.07Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL
        +G  S    +RVTN  TGAQ TVRIVD+C NGGLDLDV VF+ IDTDGNGN  G L
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL

P09762 Wound-induced protein WIN24.4e-1264.29Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL
        +G  S    +RVTN  TGAQ TVRIVD+C NGGLDLD+ VFQ IDTDG GN  G L
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL

P83343 Pathogenesis-related protein PR-4 (Fragment)4.1e-1061.82Show/hide
Query:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL
        G  S    + VTN  TGA+ TVRIVD+C NGGLDLDV VF  IDT+G GNA G L
Subjt:  GTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL

Q02243 Wound-induced protein (Fragment)4.1e-1060.71Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL
        +G  S    +RVTN  TGA   VRIVD+C NGGLDLDVGVF  IDTDG G   G L
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 42.1e-0955.36Show/hide
Query:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL
        +G  S    +RV N  T A  TVRIVD+C NGGLDLDV +F  IDTDG G   G L
Subjt:  KGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGACGGGATCCCTTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACGACCTCTCTACTATCCCTAATTCGGGTGACAAACATTGAAACAGGTGCACAACAAAC
AGTGAGAATTGTGGATAAATGTGACAATGGAGGACTAGATTTGGATGTTGGAGTGTTCCAAAGTATCGACACTGATGGAAATGGCAATGCTAATGGCTTTCTCACTGCAC
TAGGGTTTTCCTCGGAGTTCCAGGAGATCGCAGTGGATCAATCTACTAAGGGCTTGGGCCCATGCCCCTGGACGATCTTGGCATTGGGTCGAGGCAGACCATCTCCTCGA
CCTCATCAATGGGTCGAGGCCGAAGAGATGGATGAGAGAAAGGGGGCATGGGCTTTTAGCCCTCCTCCGGTTATGATGGCCTGGTATTCAGTGGACTACTCTGTTCTTCA
GCTCGAGGGGATTGAAAACAAGCTCGAGAGAAGCTTCGTTTTGCTGGGTGTTCCAGGTTTAGCGTTTTGTCGCTGTAATTCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGACGGGATCCCTTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACGACCTCTCTACTATCCCTAATTCGGGTGACAAACATTGAAACAGGTGCACAACAAAC
AGTGAGAATTGTGGATAAATGTGACAATGGAGGACTAGATTTGGATGTTGGAGTGTTCCAAAGTATCGACACTGATGGAAATGGCAATGCTAATGGCTTTCTCACTGCAC
TAGGGTTTTCCTCGGAGTTCCAGGAGATCGCAGTGGATCAATCTACTAAGGGCTTGGGCCCATGCCCCTGGACGATCTTGGCATTGGGTCGAGGCAGACCATCTCCTCGA
CCTCATCAATGGGTCGAGGCCGAAGAGATGGATGAGAGAAAGGGGGCATGGGCTTTTAGCCCTCCTCCGGTTATGATGGCCTGGTATTCAGTGGACTACTCTGTTCTTCA
GCTCGAGGGGATTGAAAACAAGCTCGAGAGAAGCTTCGTTTTGCTGGGTGTTCCAGGTTTAGCGTTTTGTCGCTGTAATTCCTTGTAA
Protein sequenceShow/hide protein sequence
MRGRDPFVQAPESALKGTTSLLSLIRVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSIDTDGNGNANGFLTALGFSSEFQEIAVDQSTKGLGPCPWTILALGRGRPSPR
PHQWVEAEEMDERKGAWAFSPPPVMMAWYSVDYSVLQLEGIENKLERSFVLLGVPGLAFCRCNSL