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Lag0006763 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006763
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:45614824..45615411
RNA-Seq ExpressionLag0006763
SyntenyLag0006763
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]4.3e-0445.16Show/hide
Query:  PNKSFWKFNTDAACSNSDSATGLGILRRDKDGDIIVASSIFLDVPMEALMAELKAIYEGLKM
        P  S  K N+DAAC +  ++TGLG++ RD  G ++VA S+FL +P+  L AE++ I E LK+
Subjt:  PNKSFWKFNTDAACSNSDSATGLGILRRDKDGDIIVASSIFLDVPMEALMAELKAIYEGLKM
XP_023906305.1 uncharacterized protein LOC112018028 [Quercus suber]5.6e-0441.79Show/hide
Query:  NTIVKGSPNKSFWKFNTDAACSNSDSATGLGILRRDKDGDIIVASSIFLDVPMEALMAELKAIYEGL
        +T+    PN  ++K NTD A      ATG+G++ RD +G II A S  + VP+  L AE KA+ EG+
Subjt:  NTIVKGSPNKSFWKFNTDAACSNSDSATGLGILRRDKDGDIIVASSIFLDVPMEALMAELKAIYEGL
TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047862.1e-0445.16Show/hide
Query:  PNKSFWKFNTDAACSNSDSATGLGILRRDKDGDIIVASSIFLDVPMEALMAELKAIYEGLKM
        P  S  K N+DAAC +  ++TGLG++ RD  G ++VA S+FL +P+  L AE++ I E LK+
Subjt:  PNKSFWKFNTDAACSNSDSATGLGILRRDKDGDIIVASSIFLDVPMEALMAELKAIYEGLKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGTCGTTTTTGGATGCTTCCTACACACATGACACATAGCCTCTACTTCAACATGATGAAGTCCAAGGTTGACATGAGTTGGAATACTATCGTGAAAGGATCTCC
AAACAAAAGTTTTTGGAAGTTTAATACTGATGCGGCTTGCTCCAACTCCGATTCAGCAACTGGATTGGGCATTTTGCGTAGAGATAAGGATGGAGATATCATAGTTGCTT
CCTCTATTTTCCTTGATGTTCCCATGGAAGCTCTGATGGCGGAACTAAAAGCGATTTACGAGGGATTGAAAATGATTCATAACCATGTTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGTCGTTTTTGGATGCTTCCTACACACATGACACATAGCCTCTACTTCAACATGATGAAGTCCAAGGTTGACATGAGTTGGAATACTATCGTGAAAGGATCTCC
AAACAAAAGTTTTTGGAAGTTTAATACTGATGCGGCTTGCTCCAACTCCGATTCAGCAACTGGATTGGGCATTTTGCGTAGAGATAAGGATGGAGATATCATAGTTGCTT
CCTCTATTTTCCTTGATGTTCCCATGGAAGCTCTGATGGCGGAACTAAAAGCGATTTACGAGGGATTGAAAATGATTCATAACCATGTTTTATGA
Protein sequenceShow/hide protein sequence
MIGRFWMLPTHMTHSLYFNMMKSKVDMSWNTIVKGSPNKSFWKFNTDAACSNSDSATGLGILRRDKDGDIIVASSIFLDVPMEALMAELKAIYEGLKMIHNHVL