| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 2.1e-99 | 46.17 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT + TE+ GK + NG +L I G++ L + NL +L VPNI KNL+SVSKLA DN + VEF EN C VKDK++GK +L+
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
G+ +GLY +G K SAFV SV + WHRRLGHP+ KV + + C + ++ FCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
Query: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
PI GFKYY+ FVDDFSRF WIYPLKQKSE + A F+ F + +NQFN IK +Q D GGEY + KL E G+Q
Subjt: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRHI E LTLLAQ MPL YWW+AF A LIN LPSQV +SP +M K D+ L+TFGC CY CL+PY HK Q+H
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C +LG S HKG+ CL+S GR+++SRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 3.3e-92 | 42.92 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GA+NHVT + E+ GK + NG +LKI G+ L+ NL VL VP I KNL+SVSKL DN + VEF N C VKDK++G+ LL+
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEAL---------
G +GL Y ++N E ++ SV + WHR+LGHP+ KV + + C + +++ FCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEAL---------
Query: ----------PISLV-------------KGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
P++L+ GFKYY+ F+DDFSRF WI+PLKQKS+ + A F+ F + +NQFN IK +Q D GGEY + K+ E G+Q
Subjt: ----------PISLV-------------KGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRH+ E LTLLAQ MPLRYWW+AF A LIN LPS V +SP +M+ + D++AL+ FGC CY CL+PY HK QFH
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C ++G S HKG+ C++S GR++VSRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 4.6e-94 | 46.19 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT D N + E +GK ++ NG+ LKI G++ L NL+ +L VP I KNL+S+SKL DN ++VEFH+ C VKDK++G+ LL
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTA-----IDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVN---EKSKFCE---
G +GLY G T+ + S T K+ N+ L+ V NI S P E FE F + C N + S C
Subjt: GVFSEGLYWFNGAKTTA-----IDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVN---EKSKFCE---
Query: ----------ALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQTRLTRPYTSQQ
PIS V GFKYY+LF+DD+SRF WIYPLKQKS+ A F+ F +V+NQFN IK LQ D GGE+ + K+ + G+Q R + PYTS Q
Subjt: ----------ALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQTRLTRPYTSQQ
Query: NGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEKCAYLGPSP
NGRAERKHRH+VE+ LTLLAQ MPL YWW+AF A LIN LP+QVI KSP + ++ K+ D++A++TFGC CY CL+PY HK QFHT KC +LG S
Subjt: NGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEKCAYLGPSP
Query: IHKGHICLSSSGRVYVSRHV
HKG+ CL+S+GR+++SRHV
Subjt: IHKGHICLSSSGRVYVSRHV
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 4.6e-94 | 43.62 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT + N +E+ GK + NG +L+I G++ L + NL +L VP I KNL+SVSKLA DN + VEF EN C VKDK++GK +LR
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
G+ +GL Y ++ + SA+ V+I S WHR+LGHP+ KV + + C + +++ FCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
Query: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
PI GFKYY+ F+DDF+RF WIYPLKQKS+ A F+ F MV+NQF+ IK +Q D GGEY + K E G+Q
Subjt: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRHI E LTLLAQ MPL YWW+AF A LIN LPS V + KSP +++ + D+++L+ FGC CY L+PY HK QFH
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C +LG S HKG+ C++S GR+++SRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| PNY02796.1 copia protein (gag-int-pol protein), partial [Trifolium pratense] | 2.1e-94 | 44.55 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT + + T + GK + NG +LKI G+ L NL VL VP I KNL+SVSKL DN + VEF + C VKDK++GK LL+
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
G EGLY + ++SS + D Y V S WHR+LGHP+ KV + + C + +++ KFCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
Query: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
PI GFKYY+ F+DDFSRF WIYPLKQKSE + A F F T+V+NQFN IK +Q D GGEY + KL E G+Q
Subjt: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRH+ E LT+LAQ MPL YWW+AF + LIN LPS + P ++Y K D+S L+ FGC CY CL+PY HK QFH
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C +LG S HKG+ C++S GR++VSRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151S6M8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-94 | 46.19 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT D N + E +GK ++ NG+ LKI G++ L NL+ +L VP I KNL+S+SKL DN ++VEFH+ C VKDK++G+ LL
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTA-----IDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVN---EKSKFCE---
G +GLY G T+ + S T K+ N+ L+ V NI S P E FE F + C N + S C
Subjt: GVFSEGLYWFNGAKTTA-----IDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVN---EKSKFCE---
Query: ----------ALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQTRLTRPYTSQQ
PIS V GFKYY+LF+DD+SRF WIYPLKQKS+ A F+ F +V+NQFN IK LQ D GGE+ + K+ + G+Q R + PYTS Q
Subjt: ----------ALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQTRLTRPYTSQQ
Query: NGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEKCAYLGPSP
NGRAERKHRH+VE+ LTLLAQ MPL YWW+AF A LIN LP+QVI KSP + ++ K+ D++A++TFGC CY CL+PY HK QFHT KC +LG S
Subjt: NGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEKCAYLGPSP
Query: IHKGHICLSSSGRVYVSRHV
HKG+ CL+S+GR+++SRHV
Subjt: IHKGHICLSSSGRVYVSRHV
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| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 2.2e-94 | 43.62 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT + N +E+ GK + NG +L+I G++ L + NL +L VP I KNL+SVSKLA DN + VEF EN C VKDK++GK +LR
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
G+ +GL Y ++ + SA+ V+I S WHR+LGHP+ KV + + C + +++ FCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
Query: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
PI GFKYY+ F+DDF+RF WIYPLKQKS+ A F+ F MV+NQF+ IK +Q D GGEY + K E G+Q
Subjt: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRHI E LTLLAQ MPL YWW+AF A LIN LPS V + KSP +++ + D+++L+ FGC CY L+PY HK QFH
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C +LG S HKG+ C++S GR+++SRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| A0A2K3NIC3 Copia protein (Gag-int-pol protein) (Fragment) | 1.0e-94 | 44.55 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT + + T + GK + NG +LKI G+ L NL VL VP I KNL+SVSKL DN + VEF + C VKDK++GK LL+
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
G EGLY + ++SS + D Y V S WHR+LGHP+ KV + + C + +++ KFCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
Query: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
PI GFKYY+ F+DDFSRF WIYPLKQKSE + A F F T+V+NQFN IK +Q D GGEY + KL E G+Q
Subjt: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRH+ E LT+LAQ MPL YWW+AF + LIN LPS + P ++Y K D+S L+ FGC CY CL+PY HK QFH
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C +LG S HKG+ C++S GR++VSRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 1.0e-99 | 46.17 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GASNHVT + TE+ GK + NG +L I G++ L + NL +L VPNI KNL+SVSKLA DN + VEF EN C VKDK++GK +L+
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
G+ +GLY +G K SAFV SV + WHRRLGHP+ KV + + C + ++ FCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----------
Query: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
PI GFKYY+ FVDDFSRF WIYPLKQKSE + A F+ F + +NQFN IK +Q D GGEY + KL E G+Q
Subjt: ----------------------LPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRHI E LTLLAQ MPL YWW+AF A LIN LPSQV +SP +M K D+ L+TFGC CY CL+PY HK Q+H
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C +LG S HKG+ CL+S GR+++SRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| A0A2Z6P4D5 Integrase catalytic domain-containing protein | 1.6e-92 | 42.92 | Show/hide |
Query: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
+GA+NHVT + E+ GK + NG +LKI G+ L+ NL VL VP I KNL+SVSKL DN + VEF N C VKDK++G+ LL+
Subjt: AGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLR
Query: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEAL---------
G +GL Y ++N E ++ SV + WHR+LGHP+ KV + + C + +++ FCEA
Subjt: GVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEAL---------
Query: ----------PISLV-------------KGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
P++L+ GFKYY+ F+DDFSRF WI+PLKQKS+ + A F+ F + +NQFN IK +Q D GGEY + K+ E G+Q
Subjt: ----------PISLV-------------KGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNECGVQ
Query: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
R++ PYTSQQNGRAERKHRH+ E LTLLAQ MPLRYWW+AF A LIN LPS V +SP +M+ + D++AL+ FGC CY CL+PY HK QFH
Subjt: TRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFH
Query: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
T +C ++G S HKG+ C++S GR++VSRHV
Subjt: TEKCAYLGPSPIHKGHICLSSSGRVYVSRHV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-19 | 24.02 | Show/hide |
Query: ILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKD------
+L +GAS+H+ D + + E +++ + + A + + LE VL NL+SV +L ++ G+ +EF ++ +
Subjt: ILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKD------
Query: KVSGKELLRGVFSEGLYWFNGAKTTAIDI---SSSTTNDNKIYSI------------NNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCY
K SG V + Y N + +D K+ I NN ELS + +N G + F+ + +
Subjt: KVSGKELLRGVFSEGLYWFNGAKTTAIDI---SSSTTNDNKIYSI------------NNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCY
Query: LSYRV-NEKSKFCEALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYA--RILKLCNECGVQTRLTR
+ + S C + + Y+++FVD F+ + Y +K KS+ ++F F + FN + L DNG EY + + C + G+ LT
Subjt: LSYRV-NEKSKFCEALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYA--RILKLCNECGVQTRLTR
Query: PYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVI--NGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEK
P+T Q NG +ER R I E T+++ + +W +A L A+ LIN +PS+ + + K+P E+ + K LR FG T Y ++ Q KF + K
Subjt: PYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVI--NGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEK
Query: CAYLGPSP
++G P
Subjt: CAYLGPSP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-30 | 27.2 | Show/hide |
Query: VSASNGSQLKIAFVGNACLSAG-NMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLRGVFSEGLYWFNGAKTTAIDISSST
V N S KIA +G+ C+ L+ V VP++ NL+S L RD ++ + + K + + +GV LY N
Subjt: VSASNGSQLKIAFVGNACLSAG-NMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKELLRGVFSEGLYWFNGAKTTAIDISSST
Query: TNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSY------------------RVNEK--------------SKFCEALP
I EL+A +S+ +WH+R+GH SEK + A++ +SY RV+ + S C +
Subjt: TNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSY------------------RVNEK--------------SKFCEALP
Query: ISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYA--RILKLCNECGVQTRLTRPYTSQQNGRAERKHRHI
I + G KY++ F+DD SR +W+Y LK K + +F F +V+ + +K L+ DNGGEY + C+ G++ T P T Q NG AER +R I
Subjt: ISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYA--RILKLCNECGVQTRLTRPYTSQQNGRAERKHRHI
Query: VETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEKCAYLG
VE ++L +P +W +A A LIN PS + + P + K + +S L+ FGC ++ + Q K + C ++G
Subjt: VETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKFQFHTEKCAYLG
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.7e-14 | 23.94 | Show/hide |
Query: LILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGK
L++ +GAS + + L + T V A + I +GN + N K L PNI +L+S+S+LA N + F N ++ G
Subjt: LILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGK
Query: ELLRGVFSEGLYWFNGAKTTAIDISSSTTND-NKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----L
L V YW + IS T N+ NK S+N + HR LGH + + + ++ ++Y ++ A
Subjt: ELLRGVFSEGLYWFNGAKTTAIDISSSTTND-NKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCEA----L
Query: PISL---------VKGFK------------------------------YYILFVDDFSRFVWIYPL-KQKSEALAALFLHFTTMVKNQFNSSIKALQPDN
P L VKG + Y+I F D+ +RF W+YPL ++ E++ +F +KNQFN+ + +Q D
Subjt: PISL---------VKGFK------------------------------YYILFVDDFSRFVWIYPL-KQKSEALAALFLHFTTMVKNQFNSSIKALQPDN
Query: GGEYAR--ILKLCNECGVQTRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTF
G EY + K G+ T S+ +G AER +R ++ TLL + +P W+ A ++++ N L S N KS + +D + + F
Subjt: GGEYAR--ILKLCNECGVQTRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTF
Query: G
G
Subjt: G
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-68 | 34.63 | Show/hide |
Query: ILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKE
+L +GA++H+T+D+NNL+ Y G + V ++GS + I+ G+ LS + NL +L VPNI KNL+SV +L NGV VEF VKD +G
Subjt: ILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKE
Query: LLRGVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCE--------
LL+G + LY + A + + + +S ++ +HS WH RLGHP+ + S LS +N KF
Subjt: LLRGVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQRCYLSYRVNEKSKFCE--------
Query: -------------------------ALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNE
+ PI ++YY++FVD F+R+ W+YPLKQKS+ + F+ F +++N+F + I DNGGE+ + + ++
Subjt: -------------------------ALPISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNE
Query: CGVQTRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHK
G+ + P+T + NG +ERKHRHIVET LTLL+ S+P YW AF VA LIN LP+ ++ +SP + ++G S ++ LR FGC CY LRPY HK
Subjt: CGVQTRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHK
Query: FQFHTEKCAYLGPSPIHKGHICLS-SSGRVYVSRHV
+ +C +LG S ++CL + R+Y+SRHV
Subjt: FQFHTEKCAYLGPSPIHKGHICLS-SSGRVYVSRHV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-67 | 35.4 | Show/hide |
Query: ILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKE
+L +GA++H+T+D+NNL+ Y G + V ++GS + I G+A L + +L KVL VPNI KNL+SV +L N V VEF VKD +G
Subjt: ILIAGASNHVTTDYNNLANPTEYEGKEQVSASNGSQLKIAFVGNACLSAGNMKFNLEKVLCVPNIVKNLVSVSKLARDNGVFVEFHENFCVVKDKVSGKE
Query: LLRGVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQR-----------------CYL--S
LL+G + LY + A + A+ + +S + +HS WH RLGHPS + S C++ S
Subjt: LLRGVFSEGLYWFNGAKTTAIDISSSTTNDNKIYSINNAELSAFVVSHSVNITLSIVIWHRRLGHPSEKVFESFAQR-----------------CYL--S
Query: YRVN------EKSKFCEAL-------PISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNEC
++V SK E + PI + ++YY++FVD F+R+ W+YPLKQKS+ + F+ F ++V+N+F + I L DNGGE+ + ++
Subjt: YRVN------EKSKFCEAL-------PISLVKGFKYYILFVDDFSRFVWIYPLKQKSEALAALFLHFTTMVKNQFNSSIKALQPDNGGEYARILKLCNEC
Query: GVQTRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKF
G+ + P+T + NG +ERKHRHIVE LTLL+ S+P YW AF VA LIN LP+ ++ +SP + ++G+ ++ L+ FGC CY LRPY HK
Subjt: GVQTRLTRPYTSQQNGRAERKHRHIVETDLTLLAQTSMPLRYWWDAFLVASMLINGLPSQVINGKSPMEIMYGKSIDFSALRTFGCTCYSCLRPYQTHKF
Query: QFHTEKCAYLGPSPIHKGHICLS-SSGRVYVSRHV
+ +++CA++G S ++CL +GR+Y SRHV
Subjt: QFHTEKCAYLGPSPIHKGHICLS-SSGRVYVSRHV
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