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Lag0006795 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006795
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionVQ domain-containing protein
Genome locationchr6:45890067..45890456
RNA-Seq ExpressionLag0006795
SyntenyLag0006795
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063578.1 hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]1.3e-1062.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA-HEMEVVKFSDD-MSSFLELDER
        MMIKAS+ALEFRAIVQQLTGF+S+  P RRR  K  +D   +RT SS  HA  EMEV+KFSDD M+S L+ D++
Subjt:  MMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA-HEMEVVKFSDD-MSSFLELDER

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]7.6e-2762.12Show/hide
Query:  MGKSVEIQVNNQREFQNNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHAH-EMEVVKFSDDMS
        MGK  E +  +Q++ Q NPTKVQRKPIKVKYISSPMMIKASNA EFRAIVQQLTGF S  +P RR   KPP  A  +  S+STLHA+ +ME +K SD+MS
Subjt:  MGKSVEIQVNNQREFQNNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHAH-EMEVVKFSDDMS

Query:  SFLEL-DERCFARQN--LPKNYMGFQSPCLFQ
        S LE  DE CF   +  L  N+MGFQ+ CLFQ
Subjt:  SFLEL-DERCFARQN--LPKNYMGFQSPCLFQ

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]5.8e-2761.97Show/hide
Query:  MGKSVEIQVNN----QREFQN-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA--HEMEVVK
        MGK  E Q  N    Q + QN NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGF+S + P RRR  K  +D   +RT S+  HA  HEMEV+K
Subjt:  MGKSVEIQVNN----QREFQN-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA--HEMEVVK

Query:  FSDD--MSSFLELD-ERCFARQN----LPKNYMGFQSPCLFQ
        FSDD  M S L+ D + CF  QN    LP N M FQS C FQ
Subjt:  FSDD--MSSFLELD-ERCFARQN----LPKNYMGFQSPCLFQ

XP_021282108.1 uncharacterized protein LOC110414990 [Herrania umbratica]7.4e-1446.83Show/hide
Query:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD-----DAPIRR-----------RLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSF
        NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG NSD     + P               +D PPA  DD     +           F DDMSS 
Subjt:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD-----DAPIRR-----------RLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSF

Query:  LELDERCFARQNLPKNYMGFQSPCLF
        LE DE  F  + +P+N  GFQSP +F
Subjt:  LELDERCFARQNLPKNYMGFQSPCLF

XP_039063993.1 uncharacterized protein LOC120208953 [Hibiscus syriacus]1.3e-1044.04Show/hide
Query:  PTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSFLELDERCFARQNLPKNY
        PTK ++ PIK++YISSP+M+KA N  EFRA+VQQLTG NSD    R   ++     D     + +L A   +   F  DMSS LEL +  F  + + +N 
Subjt:  PTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSFLELDERCFARQNLPKNY

Query:  MGFQSPCLF
        +GFQSP +F
Subjt:  MGFQSPCLF

TrEMBL top hitse value%identityAlignment
A0A061F1R9 VQ domain-containing protein5.3e-1041.18Show/hide
Query:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDD----------APIRRRLDKPPA------------DADDSRTSS--STL-----HAHE
        NPTK ++ PIK+KYISSP M+ ASNA EFRAIVQ+LTG NS            A    ++D PPA            D+D    S+  +TL     H H 
Subjt:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDD----------APIRRRLDKPPA------------DADDSRTSS--STL-----HAHE

Query:  --------MEVV------KFSDDMSSFLELDERCFARQNLPKNYMGFQSPCLF
                 +VV       F DDMSS LE DE  F  + +P+N  GFQSP +F
Subjt:  --------MEVV------KFSDDMSSFLELDERCFARQNLPKNYMGFQSPCLF

A0A0A0LIA7 VQ domain-containing protein2.8e-2761.97Show/hide
Query:  MGKSVEIQVNN----QREFQN-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA--HEMEVVK
        MGK  E Q  N    Q + QN NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGF+S + P RRR  K  +D   +RT S+  HA  HEMEV+K
Subjt:  MGKSVEIQVNN----QREFQN-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA--HEMEVVK

Query:  FSDD--MSSFLELD-ERCFARQN----LPKNYMGFQSPCLFQ
        FSDD  M S L+ D + CF  QN    LP N M FQS C FQ
Subjt:  FSDD--MSSFLELD-ERCFARQN----LPKNYMGFQSPCLFQ

A0A5A7V7M1 VQ domain-containing protein6.3e-1162.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA-HEMEVVKFSDD-MSSFLELDER
        MMIKAS+ALEFRAIVQQLTGF+S+  P RRR  K  +D   +RT SS  HA  EMEV+KFSDD M+S L+ D++
Subjt:  MMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHA-HEMEVVKFSDD-MSSFLELDER

A0A6J1A533 uncharacterized protein LOC1104149903.6e-1446.83Show/hide
Query:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD-----DAPIRR-----------RLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSF
        NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG NSD     + P               +D PPA  DD     +           F DDMSS 
Subjt:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD-----DAPIRR-----------RLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSF

Query:  LELDERCFARQNLPKNYMGFQSPCLF
        LE DE  F  + +P+N  GFQSP +F
Subjt:  LELDERCFARQNLPKNYMGFQSPCLF

A0A7J9MSD9 VQ domain-containing protein5.3e-1044.04Show/hide
Query:  KVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD-DAPIRRRLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSFLELDERCFARQNLPKNYM
        K ++ P+KVKYISSPMM+KASNA EFRAIVQ+LTG +SD   P+        A  DD     +           + DDMSS +EL +  F  + + +N  
Subjt:  KVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD-DAPIRRRLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSFLELDERCFARQNLPKNYM

Query:  GFQSPCLFQ
        GFQSP +F+
Subjt:  GFQSPCLFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41180.1 VQ motif-containing protein1.5e-0436.11Show/hide
Query:  MGKSVEIQVNNQREFQNNPTKV----------QRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAP
        M +S    + NQR+  ++PT++            KPIKV+YIS+PM ++   + +FR +VQ+LTG ++ D P
Subjt:  MGKSVEIQVNNQREFQNNPTKV----------QRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGCAAGTCTGTAGAGATTCAAGTCAACAATCAAAGGGAGTTCCAAAACAACCCCACAAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAAT
GATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAACAGCTCACTGGCTTCAACTCCGACGACGCCCCGATTCGCCGGAGACTCGACAAACCACCTGCCG
ACGCCGACGACTCTCGAACTTCATCTTCAACGTTACATGCACATGAAATGGAAGTTGTGAAATTCTCAGACGACATGTCGTCCTTCCTCGAACTGGATGAACGTTGTTTT
GCAAGACAGAATCTTCCCAAAAACTATATGGGATTCCAATCTCCTTGTTTGTTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGGCAAGTCTGTAGAGATTCAAGTCAACAATCAAAGGGAGTTCCAAAACAACCCCACAAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAAT
GATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAACAGCTCACTGGCTTCAACTCCGACGACGCCCCGATTCGCCGGAGACTCGACAAACCACCTGCCG
ACGCCGACGACTCTCGAACTTCATCTTCAACGTTACATGCACATGAAATGGAAGTTGTGAAATTCTCAGACGACATGTCGTCCTTCCTCGAACTGGATGAACGTTGTTTT
GCAAGACAGAATCTTCCCAAAAACTATATGGGATTCCAATCTCCTTGTTTGTTTCAATAG
Protein sequenceShow/hide protein sequence
MMGKSVEIQVNNQREFQNNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDAPIRRRLDKPPADADDSRTSSSTLHAHEMEVVKFSDDMSSFLELDERCF
ARQNLPKNYMGFQSPCLFQ