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Lag0006848 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006848
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:46430654..46431110
RNA-Seq ExpressionLag0006848
SyntenyLag0006848
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7569782.1 Ribonuclease H domain [Arabidopsis thaliana x Arabidopsis arenosa]2.2e-0959.18Show/hide
Query:  SWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        SWEK+C  KC+GG+GFRD+ +FNQA+LAKQ WR+++Y D LLA ++  R
Subjt:  SWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR

XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]9.8e-1066.67Show/hide
Query:  WEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL
        WEK+CQ K RGGMGFRD T FNQA++AKQGWR+I++ ++L+A+VL
Subjt:  WEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL

XP_021736460.1 uncharacterized protein LOC110703010 [Chenopodium quinoa]4.4e-1060.32Show/hide
Query:  FGFGGDLWMREGKFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL
        +G GGD     GK   +SWE +C+ K RGGMGFRDL +FNQA+LAKQGWR+I   D LL KVL
Subjt:  FGFGGDLWMREGKFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL

XP_021739763.1 uncharacterized protein LOC110706169 [Chenopodium quinoa]4.4e-1060.32Show/hide
Query:  FGFGGDLWMREGKFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL
        +G GGD     GK   +SWE +C+ K RGGMGFRDL +FNQA+LAKQGWR+I   D LL KVL
Subjt:  FGFGGDLWMREGKFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]7.5e-1062.5Show/hide
Query:  WEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        W K+ Q KCRGGMGFRD T FNQA++AKQGWR++++ D+L+AK+L  R
Subjt:  WEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein2.1e-1065.22Show/hide
Query:  SWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL
        SWEK+CQ K RGG+GFRD+T FNQA++AKQ WR+I+Y ++L+AK+L
Subjt:  SWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL

A0A2N9GQD2 Uncharacterized protein4.0e-0958.49Show/hide
Query:  EGKFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL
        E K   + W K+C+NK  GGMGFRDL++FNQA+LAKQGWR+++  + LL KVL
Subjt:  EGKFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVL

A0A6D2HN47 Reverse transcriptase domain-containing protein6.8e-0953.7Show/hide
Query:  KFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        K   +SWEK+C  KC GGMGFRD+ +FNQA+LAKQ WR+++  ++L+A++L  R
Subjt:  KFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR

A0A6D2KZH4 Reverse transcriptase domain-containing protein6.8e-0953.7Show/hide
Query:  KFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        K   +SWEK+C  KC GGMGFRD+ +FNQA+LAKQ WR+++  ++L+A++L  R
Subjt:  KFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR

A0A6J1DRA0 uncharacterized protein LOC1110224234.0e-0957.41Show/hide
Query:  KFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        K   +SW+ +C  K  GGMGFRD+++FNQAMLAKQ WR++R+ D+LLAK L G+
Subjt:  KFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.4e-0647.27Show/hide
Query:  KFTGRSWEKMCQNK-CRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        K +  +W+K+C++K   GG+GFRDL  FNQA+LAKQ +R+I     LL+++L  R
Subjt:  KFTGRSWEKMCQNK-CRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.4e-0638.46Show/hide
Query:  DLWMR---EGK-FTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        D W R   E K    ++W+ +   K  GG+GF+D+  FN A+L KQ WR++   ++L+AKV   R
Subjt:  DLWMR---EGK-FTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.8e-0847.27Show/hide
Query:  KFTGRSWEKMCQNK-CRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR
        K +  +W+K+C++K   GG+GFRDL  FNQA+LAKQ +R+I     LL+++L  R
Subjt:  KFTGRSWEKMCQNK-CRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGTTTTGGTGGAGATCTTTGGATGAGGGAAGGAAAATTCACCGGGAGAAGCTGGGAGAAGATGTGTCAAAATAAATGTCGTGGTGGAATGGGGTTCCGAGACCT
GACAATGTTCAATCAAGCTATGCTAGCAAAGCAGGGTTGGAGAGTTATCCGCTATCTTGATAATCTGCTAGCAAAAGTGCTCCTTGGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGTTTTGGTGGAGATCTTTGGATGAGGGAAGGAAAATTCACCGGGAGAAGCTGGGAGAAGATGTGTCAAAATAAATGTCGTGGTGGAATGGGGTTCCGAGACCT
GACAATGTTCAATCAAGCTATGCTAGCAAAGCAGGGTTGGAGAGTTATCCGCTATCTTGATAATCTGCTAGCAAAAGTGCTCCTTGGAAGATAA
Protein sequenceShow/hide protein sequence
MFGFGGDLWMREGKFTGRSWEKMCQNKCRGGMGFRDLTMFNQAMLAKQGWRVIRYLDNLLAKVLLGR