; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006901 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006901
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRmlC-like cupins superfamily protein
Genome locationchr6:46967102..46970289
RNA-Seq ExpressionLag0006901
SyntenyLag0006901
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065481.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.7e-3441.5Show/hide
Query:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------
        L  ++A++Y RLIGRLLYLQISR +I + VH LSQFL  P T H+ AAH L+RYLK + GQGI+L  +  F +KVFVD++WG C                
Subjt:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------

Query:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH
                                             LL + ++P    +++YCDN+  I+IASNPTFHERTKHIEIDCHF+ DK+ +     LSI+  H
Subjt:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH

PON99369.1 hypothetical protein TorRG33x02_049120 [Trema orientale]1.3e-3444.39Show/hide
Query:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------------
        +A+AYR  IGRLLYL +S  DI F VH LSQFL  P   HLKAAH L+RYLK  PGQG+  S +SS Q+K F DA+WG+C                    
Subjt:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------------

Query:  ---------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH
                                         LL D +L   S ++++CDNQ  I IASNPTFHERTKHIE+DCHFVRDKV++     L IR  H
Subjt:  ---------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH

XP_031744313.1 uncharacterized protein LOC116404977 [Cucumis sativus]7.8e-4047.96Show/hide
Query:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------
        L  ++AT YRRLIGRL+YLQISR DICF VH LSQFL  PT HHL AAH L++YLK S GQG+L+ P  SF LK FV A+WG+C                
Subjt:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------

Query:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSI
                                             LL+D K+  +  + V+CDNQ  IAI SNPTFHERTKHIEIDCHFVRDK+ E F   L I
Subjt:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSI

XP_031745923.1 uncharacterized protein LOC116406346 [Cucumis sativus]5.7e-4349.49Show/hide
Query:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------
        L+ ++AT YRRLIGRL+YLQISR DICF VH LSQFL  PT HHL AAH L++YLK SPGQG+L+ P  SF LK FVDA+WG+C                
Subjt:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------

Query:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSI
                                             LL+D K+  +  + V+CDNQ  IAIASNPTFHERTKHIEIDCHFVRDK+ E F   L I
Subjt:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSI

XP_038896371.1 uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]2.8e-3744.72Show/hide
Query:  DILSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------
        + L AD+ T YRRLI RL+YLQIS+ DICF +H LSQF+ +PT   L AAH L+RYLK+SPGQGIL+SP +SF LK FVD +WG+C              
Subjt:  DILSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------

Query:  ---------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIR
                                               LL DL++  +  + ++CDNQ VI IASNP FHERTKHIEID HFV+DK+   F   L I+
Subjt:  ---------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIR

TrEMBL top hitse value%identityAlignment
A0A1S4E444 uncharacterized mitochondrial protein AtMg00810-like3.4e-3341.5Show/hide
Query:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------
        L  ++A++YRRLIGRLLYLQISR D+ + VH LSQFL  P T HL A H L+RYLK +  QGI+L  +  F +KVFVD +W  C                
Subjt:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------

Query:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH
                                             LL DL++P    +++YCDN+  I+IASNPTFHERTKHIEID HF+ DK+ +     LSI+  H
Subjt:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH

A0A2N9IAH0 Integrase catalytic domain-containing protein2.4e-3444.72Show/hide
Query:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC------------------LL
        + + YRRLIGRLLYL ++R DI + + CLSQF+ AP   HL+AAH++++YLK SPGQG+     ++  LK F D+NW  C                  LL
Subjt:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC------------------LL

Query:  SDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH
         D  +P  S  +++CDNQ  + IA+NP FHERTKHIE+DCHF+RDK+       L +   H
Subjt:  SDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH

A0A2P5FNK4 Uncharacterized protein6.2e-3544.39Show/hide
Query:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------------
        +A+AYR  IGRLLYL +S  DI F VH LSQFL  P   HLKAAH L+RYLK  PGQG+  S +SS Q+K F DA+WG+C                    
Subjt:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------------

Query:  ---------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH
                                         LL D +L   S ++++CDNQ  I IASNPTFHERTKHIE+DCHFVRDKV++     L IR  H
Subjt:  ---------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH

A0A5D3CBP3 Putative mitochondrial protein1.8e-3441.5Show/hide
Query:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------
        L  ++A++Y RLIGRLLYLQISR +I + VH LSQFL  P T H+ AAH L+RYLK + GQGI+L  +  F +KVFVD++WG C                
Subjt:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------

Query:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH
                                             LL + ++P    +++YCDN+  I+IASNPTFHERTKHIEIDCHF+ DK+ +     LSI+  H
Subjt:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH

A0A5D3DVP4 Putative mitochondrial protein3.4e-3341.5Show/hide
Query:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------
        L  ++A++YRRLIGRLLYLQISR D+ + VH LSQFL  P T HL A H L+RYLK +  QGI+L  +  F +KVFVD +W  C                
Subjt:  LSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC----------------

Query:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH
                                             LL DL++P    +++YCDN+  I+IASNPTFHERTKHIEID HF+ DK+ +     LSI+  H
Subjt:  -------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVH

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.1e-0723.2Show/hide
Query:  DILSADE--ATAYRRLIGRLLYLQI-SRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKV--FVDANWGNC---------
        ++L++DE   T  R LIG L+Y+ + +R D+   V+ LS++     +   +   +++RYLK +    ++     +F+ K+  +VD++W            
Subjt:  DILSADE--ATAYRRLIGRLLYLQI-SRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKV--FVDANWGNC---------

Query:  ---------------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKV
                                                     LL+ + +   +   +Y DNQ  I+IA+NP+ H+R KHI+I  HF R++V
Subjt:  ---------------------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-0723.81Show/hide
Query:  YRRLIGRLLYLQI-SRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDAN---------------------------
        Y   +G L+Y  + +R DI   V  +S+FL+ P   H +A   ++RYL+ + G  +    +    LK + DA+                           
Subjt:  YRRLIGRLLYLQI-SRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDAN---------------------------

Query:  --------------------------WGNCLLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSI
                                  W    L +L L +    +VYCD+Q  I ++ N  +H RTKHI++  H++R+ V++E    L I
Subjt:  --------------------------WGNCLLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSI

P93290 Uncharacterized mitochondrial protein AtMg002402.3e-1042.65Show/hide
Query:  LYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC
        +YL I+R D+ F V+ LSQF  A  T  ++A ++++ Y+K + GQG+  S TS  QLK F D++W +C
Subjt:  LYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.7e-1827.86Show/hide
Query:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGN---------------------
        + T YR ++G L YL  +R DI + V+ LSQF+  PT  HL+A  +++RYL  +P  GI L   ++  L  + DA+W                       
Subjt:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGN---------------------

Query:  --------------------------------CLLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVHLPSG
                                         LL++L +      ++YCDN     + +NP FH R KHI ID HF+R++V        ++R VH+ + 
Subjt:  --------------------------------CLLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVHLPSG

Query:  D
        D
Subjt:  D

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.2e-1625.87Show/hide
Query:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGN---------------------
        + T YR ++G L YL  +R D+ + V+ LSQ++  PT  H  A  +++RYL  +P  GI L   ++  L  + DA+W                       
Subjt:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGN---------------------

Query:  --------------------------------CLLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVHLPSG
                                         LL++L +      ++YCDN     + +NP FH R KHI +D HF+R++V        ++R VH+ + 
Subjt:  --------------------------------CLLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVHLPSG

Query:  D
        D
Subjt:  D

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.4e-2535.36Show/hide
Query:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------------
        +A AYRRLIGRL+YLQI+R DI F V+ LSQF +AP   H +A  +++ Y+K + GQG+  S  +  QL+VF DA++ +C                    
Subjt:  EATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC--------------------

Query:  ---------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDK
                                            +L+LP    ++++CDN   I IA+N  FHERTKHIE DCH VR++
Subjt:  ---------------------------------LLSDLKLPRMSLSMVYCDNQVVIAIASNPTFHERTKHIEIDCHFVRDK

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.6e-1142.65Show/hide
Query:  LYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC
        +YL I+R D+ F V+ LSQF  A  T  ++A ++++ Y+K + GQG+  S TS  QLK F D++W +C
Subjt:  LYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC

ATMG00810.1 DNA/RNA polymerases superfamily protein9.2e-0727.63Show/hide
Query:  YRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC
        +R ++G L YL ++R DI + V+ + Q +  PT        +++RY+K +   G+ +   S   ++ F D++W  C
Subjt:  YRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATGGATATTTTATCAGCCGATGAAGCTACTGCCTACAGAAGGCTTATTGGGCGCTTACTGTACCTTCAAATCTCACGGTCGGATATTTGTTTTCCGGTTCATTG
CCTCAGCCAATTTCTGCAGGCACCCACAACTCATCATCTAAAGGCTGCACATCAGCTTATTCGTTATCTCAAGCGATCACCAGGTCAAGGCATCCTCTTATCACCCACGT
CCAGTTTTCAACTAAAGGTTTTCGTTGATGCTAATTGGGGCAATTGCCTGTTGTCTGATTTAAAGTTGCCTCGTATGTCTCTTTCAATGGTTTACTGTGATAATCAGGTT
GTTATAGCCATTGCTTCCAATCCCACGTTCCACGAGCGTACTAAACACATCGAAATTGACTGTCATTTTGTTCGGGATAAAGTCAATGAAGAATTTGCTACTCCATTGTC
TATTAGGGATGTCCATTTGCCCTCTGGGGACCCACCCCTAATGGGACGGGGAATCCCCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACATGGATATTTTATCAGCCGATGAAGCTACTGCCTACAGAAGGCTTATTGGGCGCTTACTGTACCTTCAAATCTCACGGTCGGATATTTGTTTTCCGGTTCATTG
CCTCAGCCAATTTCTGCAGGCACCCACAACTCATCATCTAAAGGCTGCACATCAGCTTATTCGTTATCTCAAGCGATCACCAGGTCAAGGCATCCTCTTATCACCCACGT
CCAGTTTTCAACTAAAGGTTTTCGTTGATGCTAATTGGGGCAATTGCCTGTTGTCTGATTTAAAGTTGCCTCGTATGTCTCTTTCAATGGTTTACTGTGATAATCAGGTT
GTTATAGCCATTGCTTCCAATCCCACGTTCCACGAGCGTACTAAACACATCGAAATTGACTGTCATTTTGTTCGGGATAAAGTCAATGAAGAATTTGCTACTCCATTGTC
TATTAGGGATGTCCATTTGCCCTCTGGGGACCCACCCCTAATGGGACGGGGAATCCCCGTTTAA
Protein sequenceShow/hide protein sequence
MYMDILSADEATAYRRLIGRLLYLQISRSDICFPVHCLSQFLQAPTTHHLKAAHQLIRYLKRSPGQGILLSPTSSFQLKVFVDANWGNCLLSDLKLPRMSLSMVYCDNQV
VIAIASNPTFHERTKHIEIDCHFVRDKVNEEFATPLSIRDVHLPSGDPPLMGRGIPV