CuGenDBv2

Gene ID	Lag0006903
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Genome location	chr6:46975255..46980690
RNA-Seq Expression	Lag0006903
Synteny	Lag0006903
Gene Ontology terms	GO:0061077 - chaperone-mediated protein folding (biological process) GO:0005840 - ribosome (cellular component) GO:0009570 - chloroplast stroma (cellular component) GO:0101031 - chaperone complex (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586393.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-61

89.06

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN
        MAYS+CSSTPICSFNAS+KP PGVFVGNSVPQKAFRINE FQRTNP KLLS EVKASDGADSN+ TTKYKSIVC+DCDGNGA+ C+QC+GTGVNSEDHFN
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN

Query:  GRFKAGGICWLCRGKRDILCGGCNGAGF
        GRFKAGG+CWLCRGKRDILCGGCNGAGF
Subjt:  GRFKAGGICWLCRGKRDILCGGCNGAGF

XP_004139310.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus]

1.4e-59

86.61

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG
        MA+S+CSSTPICSFN SS PKPGV VGNSVPQKAFRINE FQ+TN  +LLSFEVKASDGADS QTTKYKSIVC+DCDGNGA+ CSQCKGTGVNS DHFNG
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG

Query:  RFKAGGICWLCRGKRDILCGGCNGAGF
        +FKAGG+CWLCRGKRDILCGGCNGAGF
Subjt:  RFKAGGICWLCRGKRDILCGGCNGAGF

XP_022938233.1 uncharacterized protein LOC111444376 [Cucurbita moschata]

1.6e-60

88.28

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN
        MAYS+CSSTPICSFNAS+KP PGVFVGNSVPQKAFRINE FQRTNP KLLS EVKASDGA SN+ TTKYKSIVC+DCDGNGA+ C+QC+GTGVNSEDHFN
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN

Query:  GRFKAGGICWLCRGKRDILCGGCNGAGF
        GRFKAGG+CWLCRGKRDILCGGCNGAGF
Subjt:  GRFKAGGICWLCRGKRDILCGGCNGAGF

XP_022965999.1 uncharacterized protein LOC111465718 [Cucurbita maxima]

4.7e-60

88.28

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN
        MAYS+CSSTPI SFNAS+KP PGVFVGNSVPQKAFRINE FQRTNP KLLS EVKASDGADSN+ TTKYKSIVC+DCDGNGA+ C+QC+GTGVNSEDHFN
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN

Query:  GRFKAGGICWLCRGKRDILCGGCNGAGF
        GRFKAGG+CWLCRGKRDILCGGCNGAGF
Subjt:  GRFKAGGICWLCRGKRDILCGGCNGAGF

XP_038889638.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]

1.8e-59

86.61

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG
        MA+S CSSTPICSFN SSKP  GV +GNSVPQKAFRIN+ FQRTNP +LLSFEVKASDGADSNQTTKYKSIVC+DCDGNGA+LCSQCKGTGVNS DHFNG
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG

Query:  RFKAGGICWLCRGKRDILCGGCNGAGF
        +FKAG +CWLCRGKRDILCGGCNGAGF
Subjt:  RFKAGGICWLCRGKRDILCGGCNGAGF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFZ2 Uncharacterized protein

6.6e-60

86.61

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG
        MA+S+CSSTPICSFN SS PKPGV VGNSVPQKAFRINE FQ+TN  +LLSFEVKASDGADS QTTKYKSIVC+DCDGNGA+ CSQCKGTGVNS DHFNG
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG

Query:  RFKAGGICWLCRGKRDILCGGCNGAGF
        +FKAGG+CWLCRGKRDILCGGCNGAGF
Subjt:  RFKAGGICWLCRGKRDILCGGCNGAGF

A0A1S3C5F0 uncharacterized protein LOC103497244

2.5e-59

85.04

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG
        MA+S+CSSTPICSFN SS PKPGV VGNSVPQKAFR+NE  QRTNP + LSFE KASDGADS QTTKYKSIVC+DCDGNGA+LCSQCKGTGVNS DHFNG
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG

Query:  RFKAGGICWLCRGKRDILCGGCNGAGF
        +FKAGG+CWLCRGKRD+LCGGCNGAGF
Subjt:  RFKAGGICWLCRGKRDILCGGCNGAGF

A0A5A7V544 Chaperone protein DnaJ-like

2.5e-59

85.04

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG
        MA+S+CSSTPICSFN SS PKPGV VGNSVPQKAFR+NE  QRTNP + LSFE KASDGADS QTTKYKSIVC+DCDGNGA+LCSQCKGTGVNS DHFNG
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNG

Query:  RFKAGGICWLCRGKRDILCGGCNGAGF
        +FKAGG+CWLCRGKRD+LCGGCNGAGF
Subjt:  RFKAGGICWLCRGKRDILCGGCNGAGF

A0A6J1FIB2 uncharacterized protein LOC111444376

7.8e-61

88.28

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN
        MAYS+CSSTPICSFNAS+KP PGVFVGNSVPQKAFRINE FQRTNP KLLS EVKASDGA SN+ TTKYKSIVC+DCDGNGA+ C+QC+GTGVNSEDHFN
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN

Query:  GRFKAGGICWLCRGKRDILCGGCNGAGF
        GRFKAGG+CWLCRGKRDILCGGCNGAGF
Subjt:  GRFKAGGICWLCRGKRDILCGGCNGAGF

A0A6J1HSG2 uncharacterized protein LOC111465718

2.3e-60

88.28

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Query:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN
        MAYS+CSSTPI SFNAS+KP PGVFVGNSVPQKAFRINE FQRTNP KLLS EVKASDGADSN+ TTKYKSIVC+DCDGNGA+ C+QC+GTGVNSEDHFN
Subjt:  MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQ-TTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFN

Query:  GRFKAGGICWLCRGKRDILCGGCNGAGF
        GRFKAGG+CWLCRGKRDILCGGCNGAGF
Subjt:  GRFKAGGICWLCRGKRDILCGGCNGAGF

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

1.9e-27

51.91

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Query:  MAYSLC--SSTPICSFNASSK-PKPGVFVG-NSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSED
        MA SLC  SS P   F + SK PKP  F   N       +  E+ Q    S+  SFEVKA++  ++ Q TK  S+VC++C+G G + CSQCKG GVN  D
Subjt:  MAYSLC--SSTPICSFNASSK-PKPGVFVG-NSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSED

Query:  HFNGRFKAGGICWLCRGKRDILCGGCNGAGF
        HFNG+FKAG +CWLCRGK+++LCG CNGAGF
Subjt:  HFNGRFKAGGICWLCRGKRDILCGGCNGAGF

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

4.3e-24

61.73

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Query:  KLLSFEVKASDGADS-NQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNGRFKAGGICWLCRGKRDILCGGCNGAGF
        K L  + KA++   S  +  K KSI+C DC+GNGAI+C++C+G GVNS D+F GRFKAG +CWLCRGKR+ILCG CNGAGF
Subjt:  KLLSFEVKASDGADS-NQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNGRFKAGGICWLCRGKRDILCGGCNGAGF

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.3e-28

51.91

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Query:  MAYSLC--SSTPICSFNASSK-PKPGVFVG-NSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSED
        MA SLC  SS P   F + SK PKP  F   N       +  E+ Q    S+  SFEVKA++  ++ Q TK  S+VC++C+G G + CSQCKG GVN  D
Subjt:  MAYSLC--SSTPICSFNASSK-PKPGVFVG-NSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSED

Query:  HFNGRFKAGGICWLCRGKRDILCGGCNGAGF
        HFNG+FKAG +CWLCRGK+++LCG CNGAGF
Subjt:  HFNGRFKAGGICWLCRGKRDILCGGCNGAGF

AT5G55125.1 Ribosomal protein L31

1.0e-25

82.09

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Query:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAQSVGQIAKFKRRYEKGIAENVE
        MKKGLHPQMQWISYVTQSGRLMHVMMT+IHHVGKVYHF A+RQ+AQS+GQIAKFKRR+ +  AE  E
Subjt:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAQSVGQIAKFKRRYEKGIAENVE

AT5G55125.2 Ribosomal protein L31

1.0e-25

82.09

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Query:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAQSVGQIAKFKRRYEKGIAENVE
        MKKGLHPQMQWISYVTQSGRLMHVMMT+IHHVGKVYHF A+RQ+AQS+GQIAKFKRR+ +  AE  E
Subjt:  MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRARRQLAQSVGQIAKFKRRYEKGIAENVE

Sequences

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CDS sequence

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ATGGCATATTCTCTATGTTCTTCCACACCCATTTGCTCCTTTAATGCCTCGAGCAAGCCCAAGCCTGGGGTTTTTGTTGGCAATTCAGTACCTCAGAAGGCTTTTCGGAT
AAATGAAGTGTTTCAAAGAACAAACCCCAGTAAGCTTTTGTCCTTTGAGGTCAAGGCTTCAGATGGTGCAGATAGTAACCAAACCACAAAATACAAAAGCATAGTTTGCT
CAGACTGCGATGGAAATGGTGCTATCCTGTGTTCTCAGTGTAAAGGGACAGGAGTTAATTCAGAGGATCACTTCAATGGAAGGTTTAAAGCTGGTGGCATATGCTGGCTG
TGCAGAGGCAAAAGGGACATCCTTTGTGGAGGCTGTAATGGAGCTGGTTTTACTGAAACGGACGCCTTTCAACAATCAGAGCCTTGGAGGGATTTCGACATAGTTATTCA
CCCAGTCCTTCGCAACTTGAGGGTTGTTAATATCTTTTCTGCTCTTTCGGTGACGAACACTGAACATCGCGTAATGCCCACCAAATGTTTGATGAAATTATACTATAAGA
TCTGTACAATGAAGAAAGGCTTGCACCCTCAAATGCAGTGGATATCATATGTCACTCAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACCATGTTGGTAAA
GTCTATCACTTCAGAGCAAGGCGCCAATTGGCTCAAAGTGTTGGGCAGATTGCCAAGTTCAAACGTCGTTACGAGAAGGGGATTGCCGAGAATGTTGAAAATGCTGAAAA
GTGA

mRNA sequence

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Protein sequence

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MAYSLCSSTPICSFNASSKPKPGVFVGNSVPQKAFRINEVFQRTNPSKLLSFEVKASDGADSNQTTKYKSIVCSDCDGNGAILCSQCKGTGVNSEDHFNGRFKAGGICWL
CRGKRDILCGGCNGAGFTETDAFQQSEPWRDFDIVIHPVLRNLRVVNIFSALSVTNTEHRVMPTKCLMKLYYKICTMKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGK
VYHFRARRQLAQSVGQIAKFKRRYEKGIAENVENAEK

Lag0006903 (gene) of Sponge gourd (AG-4) v1 genome