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Lag0006918 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006918
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDynein light chain
Genome locationchr6:47095705..47096404
RNA-Seq ExpressionLag0006918
SyntenyLag0006918
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061594.1 dynein light chain [Cucumis melo var. makuwa]3.9e-5078.91Show/hide
Query:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF
        A LNKQMKGFKSFYKSRD G RNV + +P S SSVDK  +YKYNWLGRKSKK  DQH G  GA   GG G E M GRKVVVEGRKSVSHVETNL SVA+F
Subjt:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF

Query:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYFSF
        LQVKVLVSDMPE+MQIQAFR+ARRSYDSLEKFSSKHMAYNIKK F +
Subjt:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYFSF

XP_008457739.1 PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo]5.1e-5080Show/hide
Query:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF
        A LNKQMKGFKSFYKSRD G RNV + +P S SSVDK  +YKYNWLGRKSKK  DQH G  GA   GG G E M GRKVVVEGRKSVSHVETNL SVA+F
Subjt:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF

Query:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        LQVKVLVSDMPE+MQIQAFR+ARRSYDSLEKFSSKHMAYNIKK F
Subjt:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

XP_022143180.1 uncharacterized protein LOC111013113 [Momordica charantia]7.5e-5482.31Show/hide
Query:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGG--GGEGMVGRK-VVVEGRKSVSHVETNLASVA
        A LNKQ+KGFKSFYKSRDGAR+  A DP   + +D+VPVYKYNWLGRKSKK  DQHGGRRG E GGGG  GGEGM GRK +VVEGRKSVSHVETNLASVA
Subjt:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGG--GGEGMVGRK-VVVEGRKSVSHVETNLASVA

Query:  AFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        AFLQVKVLVSDMPEMMQ+QAFRSARRSYDSLEKFSSKHMA++IKK F
Subjt:  AFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

XP_023538230.1 uncharacterized protein LOC111799067 [Cucurbita pepo subsp. pepo]3.5e-5180.41Show/hide
Query:  AALNKQMK-GFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAE---DGGGGGGEGMVGRKVVVEGRKSVSHVETNLASV
        A LNKQMK GFKSFYKSRDGAR+VQAC+     SVDKV VYKYNWLGRKSKKV+ QHGG RGA+   DG GGGG G  GRK+VVEGRKSVSHVETNL SV
Subjt:  AALNKQMK-GFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAE---DGGGGGGEGMVGRKVVVEGRKSVSHVETNLASV

Query:  AAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        A+FLQVKVLVSDMPEMMQIQAFR ARRSYDSLEK SSK MAYN+KK F
Subjt:  AAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

XP_031736570.1 uncharacterized protein LOC101208065 [Cucumis sativus]2.4e-5278.67Show/hide
Query:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEG------MVGRKVVVEGRKSVSHVETNLA
        A LNKQMKGFKSFYKSRDG RNV + +P S+SSVDK  +YKYNWLGRKSKK  +QHGG  G   GGGGGG G      M GRKVVVEGRKSVSHVETNL 
Subjt:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEG------MVGRKVVVEGRKSVSHVETNLA

Query:  SVAAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        SVA+FLQVKVLVSDMPE+MQIQAFR+ARRSYDSLEKFSSKHMAYNIKK F
Subjt:  SVAAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

TrEMBL top hitse value%identityAlignment
A0A0A0LKY0 Uncharacterized protein5.8e-5278Show/hide
Query:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEG------MVGRKVVVEGRKSVSHVETNLA
        A LNKQMKGFKSFYKSRDG RNV + +P S+SSVDK  +YKYNWLGRKSKK  +QHGG      GGGGGG G      M GRKVVVEGRKSVSHVETNL 
Subjt:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEG------MVGRKVVVEGRKSVSHVETNLA

Query:  SVAAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        SVA+FLQVKVLVSDMPE+MQIQAFR+ARRSYDSLEKFSSKHMAYNIKK F
Subjt:  SVAAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

A0A1S3C671 uncharacterized protein LOC1034973572.4e-5080Show/hide
Query:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF
        A LNKQMKGFKSFYKSRD G RNV + +P S SSVDK  +YKYNWLGRKSKK  DQH G  GA   GG G E M GRKVVVEGRKSVSHVETNL SVA+F
Subjt:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF

Query:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        LQVKVLVSDMPE+MQIQAFR+ARRSYDSLEKFSSKHMAYNIKK F
Subjt:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

A0A5D3BEW1 Dynein light chain1.9e-5078.91Show/hide
Query:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF
        A LNKQMKGFKSFYKSRD G RNV + +P S SSVDK  +YKYNWLGRKSKK  DQH G  GA   GG G E M GRKVVVEGRKSVSHVETNL SVA+F
Subjt:  AALNKQMKGFKSFYKSRD-GARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAF

Query:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYFSF
        LQVKVLVSDMPE+MQIQAFR+ARRSYDSLEKFSSKHMAYNIKK F +
Subjt:  LQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYFSF

A0A6J1CN34 uncharacterized protein LOC1110131133.7e-5482.31Show/hide
Query:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGG--GGEGMVGRK-VVVEGRKSVSHVETNLASVA
        A LNKQ+KGFKSFYKSRDGAR+  A DP   + +D+VPVYKYNWLGRKSKK  DQHGGRRG E GGGG  GGEGM GRK +VVEGRKSVSHVETNLASVA
Subjt:  AALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGG--GGEGMVGRK-VVVEGRKSVSHVETNLASVA

Query:  AFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        AFLQVKVLVSDMPEMMQ+QAFRSARRSYDSLEKFSSKHMA++IKK F
Subjt:  AFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

A0A6J1FJ58 uncharacterized protein LOC1114443741.6e-4979.45Show/hide
Query:  AALNKQMK-GFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGE-GMVGRKVVVEGRKSVSHVETNLASVAA
        A LNKQMK GFKSFYKSRDGA NVQAC+     SVDK  VYKYNWLGRKSKKV+ QHGG RGA+ GG G G  G  GRK+VVEGRKSVSHVETNL SVA+
Subjt:  AALNKQMK-GFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGE-GMVGRKVVVEGRKSVSHVETNLASVAA

Query:  FLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        FLQVKVLVSDMPEMMQIQAFR ARRSYDSLEK SSK MAYN+KK F
Subjt:  FLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20110.1 Dynein light chain type 1 family protein1.2e-1251.11Show/hide
Query:  RRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLA----SVAAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF
        R      GGG  E         EGRKSVSHVE + A    + A  L V++L +DMP  MQ  AFR AR + DSLEKFSSKHMA+N+KK F
Subjt:  RRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLA----SVAAFLQVKVLVSDMPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGCCCTAAACAAGCAAATGAAAGGATTCAAATCCTTTTACAAGTCCCGCGACGGAGCTCGCAATGTACAGGCATGCGATCCTGGTTCAGTGAGTTCAGTGGA
TAAAGTACCTGTTTATAAGTATAACTGGTTGGGTAGGAAATCTAAGAAAGTAATCGATCAGCATGGCGGGCGGAGAGGAGCGGAGGACGGTGGCGGTGGCGGTGGGGAAG
GAATGGTGGGGAGAAAAGTGGTGGTTGAGGGTAGGAAGTCAGTTTCCCATGTGGAAACAAACTTGGCATCAGTGGCTGCATTTCTTCAAGTGAAGGTATTGGTATCAGAC
ATGCCTGAGATGATGCAAATTCAAGCTTTCAGGTCAGCAAGGAGGAGTTATGACAGCTTGGAGAAGTTCAGCTCAAAACACATGGCTTACAATATTAAAAAGTACTTTTC
CTTTTCCTTTTTGGGCATTGGGAATTTCATATTGATCTGGTTTGAGGAAATGCTCAACAGAAAGGCAGAGCAGAAGGCCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTGCCCTAAACAAGCAAATGAAAGGATTCAAATCCTTTTACAAGTCCCGCGACGGAGCTCGCAATGTACAGGCATGCGATCCTGGTTCAGTGAGTTCAGTGGA
TAAAGTACCTGTTTATAAGTATAACTGGTTGGGTAGGAAATCTAAGAAAGTAATCGATCAGCATGGCGGGCGGAGAGGAGCGGAGGACGGTGGCGGTGGCGGTGGGGAAG
GAATGGTGGGGAGAAAAGTGGTGGTTGAGGGTAGGAAGTCAGTTTCCCATGTGGAAACAAACTTGGCATCAGTGGCTGCATTTCTTCAAGTGAAGGTATTGGTATCAGAC
ATGCCTGAGATGATGCAAATTCAAGCTTTCAGGTCAGCAAGGAGGAGTTATGACAGCTTGGAGAAGTTCAGCTCAAAACACATGGCTTACAATATTAAAAAGTACTTTTC
CTTTTCCTTTTTGGGCATTGGGAATTTCATATTGATCTGGTTTGAGGAAATGCTCAACAGAAAGGCAGAGCAGAAGGCCCCTTGA
Protein sequenceShow/hide protein sequence
MAAALNKQMKGFKSFYKSRDGARNVQACDPGSVSSVDKVPVYKYNWLGRKSKKVIDQHGGRRGAEDGGGGGGEGMVGRKVVVEGRKSVSHVETNLASVAAFLQVKVLVSD
MPEMMQIQAFRSARRSYDSLEKFSSKHMAYNIKKYFSFSFLGIGNFILIWFEEMLNRKAEQKAP