; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006922 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006922
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationchr6:47140310..47141023
RNA-Seq ExpressionLag0006922
SyntenyLag0006922
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586405.1 hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sororia]5.6e-7295.08Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYASR SCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

XP_008457786.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]5.4e-6788.55Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYASRSSCYRCNS--YKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN        EVLAGDWYCNCGAHNYASRSSCYRCNS  YKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYASRSSCYRCNS--YKSVDIGALPGWKSGDW

Query:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV
        IC+RIGCETHNYASRMECYKCKTPRDFGGAV
Subjt:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV

XP_022937997.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]4.8e-7194.26Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYASRSSCYRCN+YKS DI ALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPR+FGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

XP_022966014.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]3.9e-7396.72Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGAHNYASRSSCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

XP_023538268.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]1.1e-7295.9Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYASRSSCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LIX1 Uncharacterized protein2.7e-6486.72Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYASRSSCYRCNS--YKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY +YN        EVLAGDWYCNCGAHNYASRSSCY+CNS  YKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYASRSSCYRCNS--YKSVDIGALPGWKSGDW

Query:  ICNRIGCETHNYASRMECYKCKTPRDFG
        IC+RIGCETHNYASRMECYKCK PR FG
Subjt:  ICNRIGCETHNYASRMECYKCKTPRDFG

A0A1S3C6B6 uncharacterized RNA-binding protein C17H9.04c2.6e-6788.55Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYASRSSCYRCNS--YKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN        EVLAGDWYCNCGAHNYASRSSCYRCNS  YKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYASRSSCYRCNS--YKSVDIGALPGWKSGDW

Query:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV
        IC+RIGCETHNYASRMECYKCKTPRDFGGAV
Subjt:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV

A0A6J1CPG4 uncharacterized RNA-binding protein C17H9.04c-like2.2e-6688.28Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTE---VLAGDWYCNCGAHNYASRSSCYRCNS--YKSVD-IGALPGWKSGDWICN
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEY+KT+   +LAGDWYCNCGAHNYASRS+CYRCNS  +K+VD IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTE---VLAGDWYCNCGAHNYASRSSCYRCNS--YKSVD-IGALPGWKSGDWICN

Query:  RIGCETHNYASRMECYKCKTPRDFGGAV
        RIGCE HNYASRMECYKC TPRDFGGAV
Subjt:  RIGCETHNYASRMECYKCKTPRDFGGAV

A0A6J1FCS1 zinc finger Ran-binding domain-containing protein 2-like2.3e-7194.26Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYASRSSCYRCN+YKS DI ALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPR+FGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

A0A6J1HSH3 zinc finger Ran-binding domain-containing protein 2-like1.9e-7396.72Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGAHNYASRSSCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

SwissProt top hitse value%identityAlignment
O95218 Zinc finger Ran-binding domain-containing protein 22.3e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q19QU3 Zinc finger Ran-binding domain-containing protein 22.3e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q5R580 Zinc finger Ran-binding domain-containing protein 22.3e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 24.6e-0835.64Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  CG  N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q9R020 Zinc finger Ran-binding domain-containing protein 22.3e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT1G48570.1 zinc finger (Ran-binding) family protein9.1e-0428.79Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRC
        GDW C  C ++NF   + C+ C   ++           KT    GDW C +C   N+    +C +C
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC-NCGAHNYASRSSCYRC

AT2G17975.1 zinc finger (Ran-binding) family protein8.8e-1525.36Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYEY--------NKT-------EVLAGDWYCNCGAHNYASRSSCYRC
        GDW+C  C + N+  RE C++CG  K                    Y    P +++         N T       E  +GDW C CG HNY+SR  C +C
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYEY--------NKT-------EVLAGDWYCNCGAHNYASRSSCYRC

Query:  NSYKSVDIG---------------------------------ALPG-------------------------------WKSGDWICNRIGCETHNYASRME
        N    + +G                                 + PG                               W+ GDW+C    C+ HNYASR E
Subjt:  NSYKSVDIG---------------------------------ALPG-------------------------------WKSGDWICNRIGCETHNYASRME

Query:  CYKCKTPRD
        C +CKT RD
Subjt:  CYKCKTPRD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein9.0e-5259.12Show/hide
Query:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC---NCGAHNYASRSSCYRCN----------------SYKSVDIGAL
        M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY YN+TEV+AGDWYC   NCG+HNYASR+SCYRC                 +Y +      
Subjt:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC---NCGAHNYASRSSCYRCN----------------SYKSVDIGAL

Query:  PGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFGG
        PGWK+GDW+C R+GC  HNYASR EC+KCKT RD+GG
Subjt:  PGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFGG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein7.9e-3240.26Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNK-TEVLAGDWYC---NCGAHNYASRSSCYRCNSYK--------------
        GDW C  C H+NF++R++CQRCG             +  +GG   + + +   ++V  GDWYC   NCG HN+ASRS+C++C ++K              
Subjt:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNK-TEVLAGDWYC---NCGAHNYASRSSCYRCNSYK--------------

Query:  ----SVDI--------GALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDF
              DI        G    WKSGDWIC RIGC  HN+ASRMEC++C  PRDF
Subjt:  ----SVDI--------GALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein2.4e-2836.48Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNK-TEVLAGDWYCN---CGAHNYASRSSCYRCNSYK---------------
        GDW C +C H+NF++R++CQRC  P+ GG            P  +++ +N   +V  GDWYCN   CG HN+A+RSSC++C + K               
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNK-TEVLAGDWYCN---CGAHNYASRSSCYRCNSYK---------------

Query:  SVDIGALPG------------------WKSGDWICNRIGCETHNYASRMECYKCKTPRD
         +++G   G                  WKSGDWIC R GC  HN+ASR EC++C  P++
Subjt:  SVDIGALPG------------------WKSGDWICNRIGCETHNYASRMECYKCKTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGAATTGGTCAGGAGGTGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCGAAATATGGTGGTCC
AGACCCAACAACCTACGAGTACAACAAAACAGAAGTCCTAGCAGGAGATTGGTATTGCAATTGTGGAGCTCACAACTACGCCAGTAGGTCAAGTTGCTATAGATGTAATT
CATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCAATAGAATAGGATGTGAAACACACAATTATGCTAGCAGGATGGAATGCTAC
AAATGCAAAACTCCAAGGGATTTTGGTGGAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACATGAATTGGTCAGGAGGTGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCGAAATATGGTGGTCC
AGACCCAACAACCTACGAGTACAACAAAACAGAAGTCCTAGCAGGAGATTGGTATTGCAATTGTGGAGCTCACAACTACGCCAGTAGGTCAAGTTGCTATAGATGTAATT
CATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCAATAGAATAGGATGTGAAACACACAATTATGCTAGCAGGATGGAATGCTAC
AAATGCAAAACTCCAAGGGATTTTGGTGGAGCTGTTTGA
Protein sequenceShow/hide protein sequence
MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECY
KCKTPRDFGGAV