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Lag0006952 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006952
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHeavy metal-associated domain
Genome locationchr6:47417506..47421360
RNA-Seq ExpressionLag0006952
SyntenyLag0006952
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458177.1 PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo]6.8e-3662.32Show/hide
Query:  GKVFECFLNTRGSSSCFC------LEFEDRFDQKKPLIPKQTTS---QLLRLKDVITDKTHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDS
        GKVF CF+NT  SSS  C      +E  + FDQK+PL+ KQTTS    LL  KDVIT +  TL  LQ  PKVV++RVSMHCNGCAR+VEK ISK++GV+S
Subjt:  GKVFECFLNTRGSSSCFC------LEFEDRFDQKKPLIPKQTTS---QLLRLKDVITDKTHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDS

Query:  YEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        ++VD+ER+ VVVTGDVFPFEV++C+SKVKS EI E QD
Subjt:  YEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

XP_010656353.1 PREDICTED: protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Vitis vinifera]6.1e-3767.19Show/hide
Query:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER
        G+V +CF  + GS+SCFC   LE +D F ++KPLI      QL+RLKDVI +K  TLA QLKPK+VVLRVSMHCNGCARKVEKHISKMEGV SY+VDLE 
Subjt:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER

Query:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE
        KMVVV GD+ P EVL+ VSKVK AE+W+
Subjt:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE

XP_030956298.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Quercus lobata]6.8e-3668.5Show/hide
Query:  GKVFECFLNTRGSSSCFCL---EFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER
        GKV +CF  T  SSSCFC+   E +D F + KPLI     SQLLRLKDV++    TLA QLKPK+V+LRVSMHCNGCARKVEKHISKMEGV SY+VDLE 
Subjt:  GKVFECFLNTRGSSSCFCL---EFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER

Query:  KMVVVTGDVFPFEVLQCVSKVKSAEIW
        KMVVV GD+ PFEVL+ VSKVK+AE+W
Subjt:  KMVVVTGDVFPFEVLQCVSKVKSAEIW

XP_031736582.1 uncharacterized protein LOC116402031 [Cucumis sativus]3.5e-4068.89Show/hide
Query:  GKVFECFLNTRGSS-SC--FCLEFED--RFDQKKPLIPKQTTS---QLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYE
        GKVF CF+NT  SS SC  + LE ED   FDQK+PL+PKQTTS    LL  KDVIT +  TL LQ  PKVVV+RVSMHCNGCAR+VEKHISK++GV+S++
Subjt:  GKVFECFLNTRGSS-SC--FCLEFED--RFDQKKPLIPKQTTS---QLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYE

Query:  VDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQ
        VD+ER+ VVVTGDVFPFEV+QC+SKVKS EI EPQ
Subjt:  VDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQ

XP_034699319.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Vitis riparia]1.2e-3767.97Show/hide
Query:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER
        G+V +CF  + GS+SCFC   LE +D F ++KPLI      QL+RLKDVI +K  TLA QLKPK+VVLRVSMHCNGCARKVEKHISKMEGV SY+VDLE 
Subjt:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER

Query:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE
        KMVVV GD+ PFEVL+ VSKVK AE+W+
Subjt:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE

TrEMBL top hitse value%identityAlignment
A0A2N9H2C1 HMA domain-containing protein3.3e-3669.29Show/hide
Query:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER
        GKV +CF  +  SSSCFC   LE  D F + KPLI     SQLLRLKDV+     TLA QLKPK+V+LRVSMHCNGCARKVEKHISKMEGV SY+VDLE 
Subjt:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER

Query:  KMVVVTGDVFPFEVLQCVSKVKSAEIW
        KMVVVTGD+ PFEVL+ VSKVK+AE+W
Subjt:  KMVVVTGDVFPFEVLQCVSKVKSAEIW

A0A438JQ51 Protein sodium potassium root defective 23.0e-3767.19Show/hide
Query:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER
        G+V +CF  + GS+SCFC   LE +D F ++KPLI      QL+RLKDVI +K  TLA QLKPK+VVLRVSMHCNGCARKVEKHISKMEGV SY+VDLE 
Subjt:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER

Query:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE
        KMVVV GD+ P EVL+ VSKVK AE+W+
Subjt:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE

A0A5A7V1Y2 Copper-binding family protein3.3e-3662.32Show/hide
Query:  GKVFECFLNTRGSSSCFC------LEFEDRFDQKKPLIPKQTTS---QLLRLKDVITDKTHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDS
        GKVF CF+NT  SSS  C      +E  + FDQK+PL+ KQTTS    LL  KDVIT +  TL  LQ  PKVV++RVSMHCNGCAR+VEK ISK++GV+S
Subjt:  GKVFECFLNTRGSSSCFC------LEFEDRFDQKKPLIPKQTTS---QLLRLKDVITDKTHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDS

Query:  YEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        ++VD+ER+ VVVTGDVFPFEV++C+SKVKS EI E QD
Subjt:  YEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

A0A5B7BE90 HMA domain-containing protein1.7e-3768.5Show/hide
Query:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER
        G+V +CF  + GSSSCFC   LE +D F ++KPL+  +   QL+RLKDVI +   TLA QLKPK+VVLRVSMHCNGCARKVEKHISKMEGV SY+VDLE 
Subjt:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER

Query:  KMVVVTGDVFPFEVLQCVSKVKSAEIW
        KMVVVTGD+ PFEVL+ VSKVK+AE+W
Subjt:  KMVVVTGDVFPFEVLQCVSKVKSAEIW

D7TBR6 HMA domain-containing protein3.0e-3767.19Show/hide
Query:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER
        G+V +CF  + GS+SCFC   LE +D F ++KPLI      QL+RLKDVI +K  TLA QLKPK+VVLRVSMHCNGCARKVEKHISKMEGV SY+VDLE 
Subjt:  GKVFECFLNTRGSSSCFC---LEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLER

Query:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE
        KMVVV GD+ P EVL+ VSKVK AE+W+
Subjt:  KMVVVTGDVFPFEVLQCVSKVKSAEIWE

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 452.8e-0844.29Show/hide
Query:  LQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIW
        L +   +V L V M C GC +KV + ISK++GVD+ E+D++R+ V VTG V   EVL+ V +  ++AE W
Subjt:  LQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIW

Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 28.9e-1553.12Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVL+VS+HC GC  KV KH+++M+GV S+ +D   K V VTGD+ P E+L  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 16.2e-1660.94Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 34.7e-1658.82Show/hide
Query:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP
        +VVVLRVS+HC+  GC  KV+KH+SKM+GV S+ +D   K V VTGD+ P EVL C+SKVK+A+ W P
Subjt:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP

Q94BT9 Copper transport protein ATX17.3e-0945.59Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIWEPQ
        + VVLRV+M C GC   V++ + KMEGV+S++VD++ + V V G+V P  VLQ V+K  K    WE +
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIWEPQ

Arabidopsis top hitse value%identityAlignment
AT2G37390.1 Chloroplast-targeted copper chaperone protein6.3e-1653.12Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVL+VS+HC GC  KV KH+++M+GV S+ +D   K V VTGD+ P E+L  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

AT3G24450.1 Heavy metal transport/detoxification superfamily protein2.9e-2949.23Show/hide
Query:  GKVFECFLNTRGSSSCFCLEF---EDRFDQKKPLIPKQT--TSQLLRLKDVI-TDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVD
        G+V++C        SCFCL     E+   +K+PLI   T  + +++RLKDV+  D   TLA  LKPK+V L+VSMHC GCA+KVEKHISK++GV  Y+V+
Subjt:  GKVFECFLNTRGSSSCFCLEF---EDRFDQKKPLIPKQT--TSQLLRLKDVI-TDKTHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVD

Query:  LERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        LE K VVV G++ P +VL+ + KVK+A++W
Subjt:  LERKMVVVTGDVFPFEVLQCVSKVKSAEIW

AT3G53530.1 Chloroplast-targeted copper chaperone protein3.4e-1758.82Show/hide
Query:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP
        +VVVLRVS+HC+  GC  KV+KH+SKM+GV S+ +D   K V VTGD+ P EVL C+SKVK+A+ W P
Subjt:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP

AT5G02600.1 Heavy metal transport/detoxification superfamily protein4.4e-1760.94Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein4.4e-1760.94Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGCGGCAGGCGACGGCAACGGCAAGGGCGGCGGCTGCAAGAGGCGACGGCTAGGTTTCAAGAAGAGAGAAAGGGTTTTTCGGGGCTGGGAATTAATGGGAAT
TGCTGGGAAAGTTTTCGAGTGTTTCTTAAATACAAGAGGTTCGAGTTCGTGCTTCTGCCTGGAATTTGAAGACAGATTTGATCAGAAAAAGCCGTTAATACCCAAACAAA
CCACATCTCAGCTTCTCAGACTGAAGGATGTGATTACTGATAAAACCCACACCCTCGCTCTTCAGTTGAAGCCCAAGGTGGTAGTGCTGAGGGTGTCCATGCATTGCAAT
GGTTGTGCCAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGTGTGGACTCATATGAGGTAGATTTGGAAAGGAAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTT
TGAAGTTCTGCAATGCGTTTCCAAAGTGAAAAGTGCAGAGATCTGGGAACCTCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGGCGGCAGGCGACGGCAACGGCAAGGGCGGCGGCTGCAAGAGGCGACGGCTAGGTTTCAAGAAGAGAGAAAGGGTTTTTCGGGGCTGGGAATTAATGGGAAT
TGCTGGGAAAGTTTTCGAGTGTTTCTTAAATACAAGAGGTTCGAGTTCGTGCTTCTGCCTGGAATTTGAAGACAGATTTGATCAGAAAAAGCCGTTAATACCCAAACAAA
CCACATCTCAGCTTCTCAGACTGAAGGATGTGATTACTGATAAAACCCACACCCTCGCTCTTCAGTTGAAGCCCAAGGTGGTAGTGCTGAGGGTGTCCATGCATTGCAAT
GGTTGTGCCAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGTGTGGACTCATATGAGGTAGATTTGGAAAGGAAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTT
TGAAGTTCTGCAATGCGTTTCCAAAGTGAAAAGTGCAGAGATCTGGGAACCTCAAGACTGA
Protein sequenceShow/hide protein sequence
MKVAAGDGNGKGGGCKRRRLGFKKRERVFRGWELMGIAGKVFECFLNTRGSSSCFCLEFEDRFDQKKPLIPKQTTSQLLRLKDVITDKTHTLALQLKPKVVVLRVSMHCN
GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD