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Lag0006972 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006972
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationchr6:47617452..47620156
RNA-Seq ExpressionLag0006972
SyntenyLag0006972
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599455.1 hypothetical protein SDJN03_09233, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3284.54Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASL+AVSRLSSRL SLAPKLNKRS SSELSPFKS C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

KAG7030432.1 hypothetical protein SDJN02_08779, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-3288.17Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASL+AVSRLSSRL SLAPKLNKRS SSELSPFKS C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

XP_022946234.1 uncharacterized protein LOC111450380 [Cucurbita moschata]5.0e-3284.54Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASL+AVSRLSSRL SLAPKLNKRS SSELSPFKS C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

XP_023547330.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]3.8e-3284.54Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASL+AVSRLSSRL SLAPKLNKRS SSELSPFKS+C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

XP_038889658.1 uncharacterized protein LOC120079520 [Benincasa hispida]3.8e-3284.54Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASLK VSRLSSRL SLAPK NKRSS SELSPFKS C+SQPS ASTSRLPCTSRLP+ELSSQGSLMPLHS IAAARLISSLTIE++GWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein4.1e-3285.57Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASLKAVSRLSSRL SLAPK NKRSSSSEL  FKSTC+SQPSAASTSRL CTSRLP+ELSSQGSLMPLHS IAAARLISSLTIE++GWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

A0A5A7V7B3 Protein NUCLEAR FUSION DEFECTIVE 67.0e-3281.73Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKIVSE
        MASLKAVSRLSSRL SL+PK NKRSSSSEL   KSTC+SQPSAASTSRL CTSRLP+ELSSQGSLMPLHS IAAARLISSLTIE++GWGLVPQ M  +S 
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKIVSE

Query:  FQKL
        F  L
Subjt:  FQKL

A0A6J1DYI4 uncharacterized protein LOC1110242174.5e-3182.47Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASLKAVSRLSSRLHSLAPKL K+  SSE SP KS+C+S+PSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSLTIE+RGWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

A0A6J1G399 uncharacterized protein LOC1114503802.4e-3284.54Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASL+AVSRLSSRL SLAPKLNKRS SSELSPFKS C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

A0A6J1KDE2 uncharacterized protein LOC1114938769.2e-3283.51Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MASL+AVSRLSSRL SLAPKLNKRS SSELSPFKS+C+SQPSAAS SR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein1.0e-1448.45Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MAS   + RLSS++HSL  KL+K  ++  +S   S  KS   +++TSR+  + RLP+ELS   S++PLHS IA+ARLISSL++E++ WGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

AT1G55205.2 unknown protein1.0e-1448.48Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKIVS
        MAS   + RLSS++HSL  KL+K  ++  +S   S  KS   +++TSR+  + RLP+ELS   S++PLHS IA+ARLISSL++E++ WGLVPQ     S
Subjt:  MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKIVS

AT3G13674.1 unknown protein5.5e-1350.51Show/hide
Query:  MASLKAVSRLSSRLHSLAPKL-NKRSSSSEL-SPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        MAS + + R SSRL SL   L NK ++ S L SP KS   + PS+A++ RL  +SRLP+ELS   S++PLHS IA++RL+SSL++E++ WGLVPQ + +
Subjt:  MASLKAVSRLSSRLHSLAPKL-NKRSSSSEL-SPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI

AT4G39300.2 unknown protein4.7e-0435.94Show/hide
Query:  KSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI
        K T  S P A+ +  +P  SR+   L S  +++PLHS +A+ARL SS+  ++  W L+ Q++ +
Subjt:  KSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAGGCAGTCTCTCGTTTATCATCTCGCTTGCACTCTCTCGCTCCAAAGCTCAACAAAAGGTCTTCATCTTCTGAGCTATCTCCATTCAAATCGACTTG
TAAATCTCAGCCCTCCGCAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTGCCATTAGAGTTGAGTAGCCAGGGGTCATTGATGCCATTGCACAGCACCATAGCTG
CAGCAAGATTGATTTCGAGTCTGACCATTGAAGCTCGAGGATGGGGTTTAGTTCCTCAGGACATGAAAATAGTGTCAGAGTTTCAAAAACTTTTAGGATCTGGTCAGAGT
TCAGGTCGACTTCAATGCATATGTTTTGCGGAATTCAACTTGGGTAACTGTGAGAGTACTAAGGTATTTCAATGCCTTTATGACAGTTCTGCTTTGCAGGAAGTTGTTCT
CTACAGTTCTCTGTTTGTTGACAATTGGGGTTTCTTTTTTACTTTTACCTCCCTGCCAGAATATAAACCTCAATCAATTGGGGTTTCTTTTGTCCTAAATGTTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTTAAAGGCAGTCTCTCGTTTATCATCTCGCTTGCACTCTCTCGCTCCAAAGCTCAACAAAAGGTCTTCATCTTCTGAGCTATCTCCATTCAAATCGACTTG
TAAATCTCAGCCCTCCGCAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTGCCATTAGAGTTGAGTAGCCAGGGGTCATTGATGCCATTGCACAGCACCATAGCTG
CAGCAAGATTGATTTCGAGTCTGACCATTGAAGCTCGAGGATGGGGTTTAGTTCCTCAGGACATGAAAATAGTGTCAGAGTTTCAAAAACTTTTAGGATCTGGTCAGAGT
TCAGGTCGACTTCAATGCATATGTTTTGCGGAATTCAACTTGGGTAACTGTGAGAGTACTAAGGTATTTCAATGCCTTTATGACAGTTCTGCTTTGCAGGAAGTTGTTCT
CTACAGTTCTCTGTTTGTTGACAATTGGGGTTTCTTTTTTACTTTTACCTCCCTGCCAGAATATAAACCTCAATCAATTGGGGTTTCTTTTGTCCTAAATGTTGGATGA
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLHSLAPKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQDMKIVSEFQKLLGSGQS
SGRLQCICFAEFNLGNCESTKVFQCLYDSSALQEVVLYSSLFVDNWGFFFTFTSLPEYKPQSIGVSFVLNVG