; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006996 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006996
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationchr6:47877389..47877742
RNA-Seq ExpressionLag0006996
SyntenyLag0006996
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599476.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]8.9e-5183.05Show/hide
Query:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        MAA +V +   RNL+A+ PIEFLFDLDMVLSGADDFGCCQ+SASDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWLAV +CCPLCR
Subjt:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

Query:  CTVAGHPPEAPSSSLIRR
        C ++G PPE+PSS+LIRR
Subjt:  CTVAGHPPEAPSSSLIRR

KAG7030453.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-5183.05Show/hide
Query:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        MAA +V +   RNL+A+ PIEFLFDLDMVLSGADDFGCCQ+SASDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWLAV +CCPLCR
Subjt:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

Query:  CTVAGHPPEAPSSSLIRR
        C ++G PPE+PSS+LIRR
Subjt:  CTVAGHPPEAPSSSLIRR

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]4.0e-5183.9Show/hide
Query:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        MAA +V +   RNL+A+ PIEFLFDLDMVLSGADDFGCCQ+SASDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWLAV +CCPLCR
Subjt:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

Query:  CTVAGHPPEAPSSSLIRR
        C +AG PPE+PSS+LIRR
Subjt:  CTVAGHPPEAPSSSLIRR

XP_023545409.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]8.9e-5183.9Show/hide
Query:  MAAAAVMSSPARNLS-ASPIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        MAA +V +   RNL+ A PIEFLFDLDMVLSGADDFGCCQ+SASDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWLAV +CCPLCR
Subjt:  MAAAAVMSSPARNLS-ASPIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

Query:  CTVAGHPPEAPSSSLIRR
        C +AG PPE+PSS+LIRR
Subjt:  CTVAGHPPEAPSSSLIRR

XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]2.4e-4883.05Show/hide
Query:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        MAAAAVM+ P RNL A+ PIEFLFDLDMVLSGADDFGCCQ+SA+DSLVADLP VVADVCAVCLEDF PDE GKQIPCGHVYHESCISSWL V DCCPLCR
Subjt:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

Query:  CTVAGHPPEAPSSSLIRR
        C VAG PP+   S+LIRR
Subjt:  CTVAGHPPEAPSSSLIRR

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein7.9e-4577.97Show/hide
Query:  MAAAAVMSSPARNL-SASPIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        MAAAAVM+ P  NL S  PIEFLFDLD VLSGADD GCCQ++ SDS VAD PTVVADVCAVCL+DF PDE GKQIPCGHVYHESCISSWL V DCCPLCR
Subjt:  MAAAAVMSSPARNL-SASPIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

Query:  CTVAGHPPEAPSSSLIRR
        C VAG PP+   S+LIRR
Subjt:  CTVAGHPPEAPSSSLIRR

A0A1S4DZX3 RING-H2 finger protein ATL5-like1.7e-4276.47Show/hide
Query:  MAAAAVMSSPARNL-SASPIEFLFDLDMVLSGADDFGC-CQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLC
        MAAAAVM+ P   L S  PIEFLFDLD VLSGADD  C CQ++ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWL V DCCPLC
Subjt:  MAAAAVMSSPARNL-SASPIEFLFDLDMVLSGADDFGC-CQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLC

Query:  RCTVAGHPPEAPSSSLIRR
        RC VAG PP+   S+LIRR
Subjt:  RCTVAGHPPEAPSSSLIRR

A0A5A7V2P4 RING-H2 finger protein ATL5-like1.7e-4276.47Show/hide
Query:  MAAAAVMSSPARNL-SASPIEFLFDLDMVLSGADDFGC-CQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLC
        MAAAAVM+ P   L S  PIEFLFDLD VLSGADD  C CQ++ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWL V DCCPLC
Subjt:  MAAAAVMSSPARNL-SASPIEFLFDLDMVLSGADDFGC-CQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLC

Query:  RCTVAGHPPEAPSSSLIRR
        RC VAG PP+   S+LIRR
Subjt:  RCTVAGHPPEAPSSSLIRR

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like2.6e-4073.73Show/hide
Query:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSA---SDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCP
        MAA AV++   RNL+A+ P+E LFDLDMVLSG DDFGCC V+A   SDS+VADLPTVVADVCAVC EDFR DEGGKQIPCGHVYHE CISSWLAV DCCP
Subjt:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSA---SDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCP

Query:  LCRCTVAGHPPEAPSSSL
        LCR  V   PP  PS+S+
Subjt:  LCRCTVAGHPPEAPSSSL

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like1.9e-5183.9Show/hide
Query:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        MAA +V +   RNL+A+ PIEFLFDLDMVLSGADDFGCCQ+SASDSLVADLPTVVADVCAVCLEDFRPDE GKQIPCGHVYHESCISSWLAV +CCPLCR
Subjt:  MAAAAVMSSPARNLSAS-PIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

Query:  CTVAGHPPEAPSSSLIRR
        C +AG PPE+PSS+LIRR
Subjt:  CTVAGHPPEAPSSSLIRR

SwissProt top hitse value%identityAlignment
Q8LPN7 E3 ubiquitin-protein ligase RING1-like2.0e-0834.57Show/hide
Query:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAGHPPEAPSSS
        AS S +  LPTV           + CAVC+++F      KQ+PC HV+H+ C+  WL + + CP+CR  +    P+  + S
Subjt:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAGHPPEAPSSS

Q91YL2 E3 ubiquitin-protein ligase RNF1262.0e-0846.81Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAG
        C VC ED+   E  +Q+PC H++H+SCI  WL   D CP+CR ++ G
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAG

Q9D0C1 E3 ubiquitin-protein ligase RNF1152.6e-0838.03Show/hide
Query:  ASDSLVADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAG
        A    +  LPTV            C VC ED+  +E  +Q+PC H +H SCI  WL + D CP+CR ++ G
Subjt:  ASDSLVADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAG

Q9VHI7 E3 ubiquitin-protein ligase Iruka8.8e-0945.65Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVA
        C++C +DF+ DE  +++PC H+YHE+CI  WL +   CP+CR ++A
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVA

Q9Y4L5 E3 ubiquitin-protein ligase RNF1158.8e-0936.25Show/hide
Query:  ASDSLVADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAGHPPEAPSSS
        A    +  LPTV            C VC ED+  +E  +Q+PC H +H SCI  WL + D CP+CR ++ G      S S
Subjt:  ASDSLVADLPTVVAD--------VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAGHPPEAPSSS

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein5.7e-1145.61Show/hide
Query:  LVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTV
        ++ D   V   VCA+C E+F   E GK++ C H+YH SCI SWL + + CP+CR  V
Subjt:  LVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTV

AT2G39720.1 RING-H2 finger C2A3.1e-0936.99Show/hide
Query:  CCQVSASDSLVADLPTVVADV----------CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        C    AS S +  LP +  D           CAVC E+F      +++PC H+YH  CI  WLA+ + CP+CR
Subjt:  CCQVSASDSLVADLPTVVADV----------CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

AT2G44330.1 RING/U-box superfamily protein3.1e-0950Show/hide
Query:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        CA+C EDF   E  +++PC H+YH  CI  WL   + CPLCR
Subjt:  CAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR

AT3G19950.1 RING/U-box superfamily protein1.4e-0934.57Show/hide
Query:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAGHPPEAPSSS
        AS S +  LPTV           + CAVC+++F      KQ+PC HV+H+ C+  WL + + CP+CR  +    P+  + S
Subjt:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAGHPPEAPSSS

AT3G60080.1 RING/U-box superfamily protein1.4e-0951.16Show/hide
Query:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR
        +CAVC EDF   E  +++PC H+YH  CI  WL+  + CPLCR
Subjt:  VCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCGTGATGTCCTCGCCGGCAAGAAACTTATCGGCTTCTCCAATCGAATTTCTGTTCGACCTGGACATGGTTCTGTCGGGAGCCGACGACTTCGGTTG
CTGCCAGGTCAGCGCTTCCGATTCGCTGGTGGCGGATCTGCCGACGGTGGTCGCCGATGTTTGCGCCGTTTGTTTGGAAGATTTCCGGCCAGATGAGGGCGGAAAACAAA
TCCCCTGTGGCCACGTGTACCACGAATCTTGTATTTCCTCTTGGCTCGCCGTCGGCGACTGTTGCCCTCTCTGTCGGTGCACCGTCGCCGGCCATCCGCCGGAAGCGCCT
TCTTCGAGTTTGATCCGACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCCGTGATGTCCTCGCCGGCAAGAAACTTATCGGCTTCTCCAATCGAATTTCTGTTCGACCTGGACATGGTTCTGTCGGGAGCCGACGACTTCGGTTG
CTGCCAGGTCAGCGCTTCCGATTCGCTGGTGGCGGATCTGCCGACGGTGGTCGCCGATGTTTGCGCCGTTTGTTTGGAAGATTTCCGGCCAGATGAGGGCGGAAAACAAA
TCCCCTGTGGCCACGTGTACCACGAATCTTGTATTTCCTCTTGGCTCGCCGTCGGCGACTGTTGCCCTCTCTGTCGGTGCACCGTCGCCGGCCATCCGCCGGAAGCGCCT
TCTTCGAGTTTGATCCGACGGTAG
Protein sequenceShow/hide protein sequence
MAAAAVMSSPARNLSASPIEFLFDLDMVLSGADDFGCCQVSASDSLVADLPTVVADVCAVCLEDFRPDEGGKQIPCGHVYHESCISSWLAVGDCCPLCRCTVAGHPPEAP
SSSLIRR