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Lag0006997 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006997
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationchr6:47897756..47898121
RNA-Seq ExpressionLag0006997
SyntenyLag0006997
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586449.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]7.3e-4878.69Show/hide
Query:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF
        MAA LPE TRSAFAASYIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV D PTVV D+VCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSV GD 
Subjt:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K+E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

KAG7021303.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-4879.51Show/hide
Query:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF
        MAA LPE TRSAFAASYIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV DLPTVV D+VCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSV GD 
Subjt:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K+E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

XP_022938297.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]9.6e-4878.69Show/hide
Query:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF
        MAA LPE TRSAFAA YIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV DLPTVV D+VCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSV GD 
Subjt:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K+E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

XP_022965415.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima]9.6e-4878.69Show/hide
Query:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF
        MAA LPE TRSAFAASYIMD+ESMFDLDTVLTGADD+Y D+  +T PPSVVV+DLPTVV D+VCAVCME+FR DEGGK IPCGHVYHQ+C+SSWLSVGD 
Subjt:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

XP_023537996.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]1.0e-4980.17Show/hide
Query:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFC
        MAA LPE TRSAFAASYIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV DLPTVV D+VCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSVGD C
Subjt:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFC

Query:  PLCRRHVSSGDKTEAPKTVQV
        PLCR HVSS +K+E  K VQV
Subjt:  PLCRRHVSSGDKTEAPKTVQV

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ1 RING-type domain-containing protein2.0e-4376.32Show/hide
Query:  TRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTV-VADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHV
        T + +AASYIMDIESMFDLDTVLTGADDFYY  TV  PP V+V +LPTV  AD+VCAVCMEDF PDEGGK IPCGHVYHQ+CLSSWLS+ D CPLCR H+
Subjt:  TRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTV-VADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHV

Query:  SSGDKTEAPKTVQV
        + GDKTE  KTVQV
Subjt:  SSGDKTEAPKTVQV

A0A5A7V793 RING-H2 finger protein ATL5-like1.8e-4476.11Show/hide
Query:  TRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS
        T +  AA YIMDIESMFDLDTVL+GADDFYY  T   PP VVV DLPTV  D+ CAVCMEDF PDEGGK IPCGHVYHQ+C+SSWLSVGD CPLCRRH++
Subjt:  TRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS

Query:  SGDKTEAPKTVQV
         GDKTE  KTVQV
Subjt:  SGDKTEAPKTVQV

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like3.2e-2562.26Show/hide
Query:  AALPETTRSAFAASYIMDIESMFDLDTVLTGADDF-YYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCP
        A L ETTR+  AA+Y M++  +FDLD VL+G DDF     T       +V DLPTVVAD VCAVC EDFR DEGGK IPCGHVYH+ C+SSWL+V D CP
Subjt:  AALPETTRSAFAASYIMDIESMFDLDTVLTGADDF-YYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCP

Query:  LCRRHV
        LCRR V
Subjt:  LCRRHV

A0A6J1FDN7 E3 ubiquitin-protein ligase RING1-like4.6e-4878.69Show/hide
Query:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF
        MAA LPE TRSAFAA YIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV DLPTVV D+VCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSV GD 
Subjt:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K+E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

A0A6J1HNM2 E3 ubiquitin-protein ligase RNF181-like4.6e-4878.69Show/hide
Query:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF
        MAA LPE TRSAFAASYIMD+ESMFDLDTVLTGADD+Y D+  +T PPSVVV+DLPTVV D+VCAVCME+FR DEGGK IPCGHVYHQ+C+SSWLSVGD 
Subjt:  MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

SwissProt top hitse value%identityAlignment
Q8LPN7 E3 ubiquitin-protein ligase RING1-like5.3e-0940.26Show/hide
Query:  TPPPSVVVTD-LPTVVADE--------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD
        TPP S    D LPTV   +         CAVCM++F      K +PC HV+HQ CL  WL + + CP+CR  + + D
Subjt:  TPPPSVVVTD-LPTVVADE--------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD

Q9D0C1 E3 ubiquitin-protein ligase RNF1154.8e-1035.9Show/hide
Query:  PPPS--VVVTDLPTVVADE-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKT
        PPP+    +T LPTV   +        C VC ED+  +E  + +PC H +H +C+  WL + D CP+CR+ ++  D T
Subjt:  PPPS--VVVTDLPTVVADE-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKT

Q9M622 Receptor homology region, transmembrane domain- and RING domain-containing protein 11.4e-0936.47Show/hide
Query:  KTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT
        K V   P    TD     A E CA+C+ED+R  E  +++PC H +H  C+ SWL+  G  CP+C+  +      S   K E+P+T
Subjt:  KTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT

Q9VHI7 E3 ubiquitin-protein ligase Iruka3.1e-0934.07Show/hide
Query:  LDTVLTGADDFYYDKTVTPPP--SVVVTDLPTVV--ADEV-----CAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS
        LDT++T        +T  PPP  +  + ++P V   A+EV     C++C +DF+ DE  + +PC H+YH+ C+  WL++   CP+CR+ ++
Subjt:  LDTVLTGADDFYYDKTVTPPP--SVVVTDLPTVV--ADEV-----CAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS

Q9Y4L5 E3 ubiquitin-protein ligase RNF1152.2e-1032.94Show/hide
Query:  PPPS--VVVTDLPTVVADE-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ
        PPP+    +T LPTV   +        C VC ED+  +E  + +PC H +H +C+  WL + D CP+CR+ ++  D T   ++ +
Subjt:  PPPS--VVVTDLPTVVADE-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein3.1e-1234Show/hide
Query:  FDLDTVLTGADDFYYD----KTVTPPP----------SVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSG
        F+ D ++   D+ + D      + PPP          +V++TD   +V ++VCA+C E+F   E GK + C H+YH +C+ SWL++ + CP+CR  V+ G
Subjt:  FDLDTVLTGADDFYYD----KTVTPPP----------SVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSG

AT3G19950.1 RING/U-box superfamily protein3.8e-1040.26Show/hide
Query:  TPPPSVVVTD-LPTVVADE--------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD
        TPP S    D LPTV   +         CAVCM++F      K +PC HV+HQ CL  WL + + CP+CR  + + D
Subjt:  TPPPSVVVTD-LPTVVADE--------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD

AT3G60080.1 RING/U-box superfamily protein8.4e-1051.16Show/hide
Query:  VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCR
        +CAVC EDF   E  + +PC H+YH  C+  WLS  + CPLCR
Subjt:  VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCR

AT5G66160.1 receptor homology region transmembrane domain ring H2 motif protein 11.0e-1036.47Show/hide
Query:  KTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT
        K V   P    TD     A E CA+C+ED+R  E  +++PC H +H  C+ SWL+  G  CP+C+  +      S   K E+P+T
Subjt:  KTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT

AT5G66160.2 receptor homology region transmembrane domain ring H2 motif protein 11.1e-0938.24Show/hide
Query:  KTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV
        K V   P    TD     A E CA+C+ED+R  E  +++PC H +H  C+ SWL+  G  CP+C+  +
Subjt:  KTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTGCCTTGCCTGAAACAACAAGATCAGCTTTTGCAGCGAGCTACATCATGGACATCGAGTCGATGTTCGACCTCGACACCGTCCTCACCGGAGCCGATGACTT
CTATTACGACAAGACCGTCACACCGCCGCCATCAGTGGTGGTTACCGACTTGCCGACGGTGGTAGCCGACGAGGTATGTGCTGTTTGCATGGAGGATTTCCGGCCGGACG
AAGGTGGTAAAATGATCCCCTGCGGCCATGTGTACCATCAAACTTGTCTATCCTCATGGCTCTCCGTCGGAGACTTTTGCCCTCTCTGCCGCCGCCATGTCTCCTCCGGC
GACAAGACGGAGGCGCCGAAGACCGTACAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTGCCTTGCCTGAAACAACAAGATCAGCTTTTGCAGCGAGCTACATCATGGACATCGAGTCGATGTTCGACCTCGACACCGTCCTCACCGGAGCCGATGACTT
CTATTACGACAAGACCGTCACACCGCCGCCATCAGTGGTGGTTACCGACTTGCCGACGGTGGTAGCCGACGAGGTATGTGCTGTTTGCATGGAGGATTTCCGGCCGGACG
AAGGTGGTAAAATGATCCCCTGCGGCCATGTGTACCATCAAACTTGTCTATCCTCATGGCTCTCCGTCGGAGACTTTTGCCCTCTCTGCCGCCGCCATGTCTCCTCCGGC
GACAAGACGGAGGCGCCGAAGACCGTACAAGTTTAG
Protein sequenceShow/hide protein sequence
MAAALPETTRSAFAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVVADEVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSG
DKTEAPKTVQV