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Lag0007027 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007027
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description40S ribosomal protein S30
Genome locationchr6:48179340..48180430
RNA-Seq ExpressionLag0007027
SyntenyLag0007027
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006846 - Ribosomal protein S30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651498.1 hypothetical protein Csa_019324 [Cucumis sativus]1.2e-2574.19Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN--FWSVPFDITPLEVVEGVMFGMMEIEVFTV
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE   +W   F I  L+       G + I++F V
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN--FWSVPFDITPLEVVEGVMFGMMEIEVFTV

OWM70352.1 hypothetical protein CDL15_Pgr004489 [Punica granatum]7.0e-2683.75Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN    P  ++ L   EGV+
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM

PKI61372.1 hypothetical protein CRG98_018220 [Punica granatum]2.0e-2583.75Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN   V F +    + EGV+
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM

PQP92344.1 hypothetical protein Pyn_30132 [Prunus yedoensis var. nudiflora]1.2e-25100Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENF
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENF
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENF

TVU27849.1 hypothetical protein EJB05_19350 [Eragrostis curvula]1.6e-2573.33Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVMFGMMEIEVFT
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN+      +  L++ + +    +  EV+T
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVMFGMMEIEVFT

TrEMBL top hitse value%identityAlignment
A0A218WE70 40S ribosomal protein S303.4e-2683.75Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN    P  ++ L   EGV+
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM

A0A2I0JYP6 40S ribosomal protein S309.8e-2683.75Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN   V F +    + EGV+
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVM

A0A314XFR0 40S ribosomal protein S305.8e-26100Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENF
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENF
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENF

A0A5J9UVE8 40S ribosomal protein S307.5e-2673.33Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVMFGMMEIEVFT
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN+      +  L++ + +    +  EV+T
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVMFGMMEIEVFT

A0A6J5U8A7 40S ribosomal protein S302.9e-25100Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN

SwissProt top hitse value%identityAlignment
P49689 40S ribosomal protein S303.3e-2696.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE

P62860 40S ribosomal protein S304.3e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62861 40S ribosomal protein S304.3e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62862 40S ribosomal protein S304.3e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62866 40S ribosomal protein S304.3e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

Arabidopsis top hitse value%identityAlignment
AT2G19750.1 Ribosomal protein S30 family protein2.3e-2796.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE

AT4G29390.1 Ribosomal protein S30 family protein2.3e-2796.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE

AT5G56670.1 Ribosomal protein S30 family protein2.3e-2796.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGTTCACGGATCTTTGGCTCGTGCCGGTAAGGTGAGAGGCCAGACACCAAAAGTTGCTAAGCAGGACAAGAAGAAGAAGCCACGAGGACGCGCCCAC
AAACGGATGCAATACAACCGCAGATTCGTCACTGCCGTTGTTGGTTTCGGCAAGAAGAGAGGACCAAACTCGTCCGAGAATTTTTGGAGTGTTCCTTTTGACATA
ACACCTCTAGAAGTAGTTGAGGGTGTTATGTTTGGTATGATGGAGATTGAAGTGTTTACTGTTTACTGGAATGTAGTTGGTTTACTTGGAAGGGGGAAAGGACTG
CTATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGTTCACGGATCTTTGGCTCGTGCCGGTAAGGTGAGAGGCCAGACACCAAAAGTTGCTAAGCAGGACAAGAAGAAGAAGCCACGAGGACGCGCCCAC
AAACGGATGCAATACAACCGCAGATTCGTCACTGCCGTTGTTGGTTTCGGCAAGAAGAGAGGACCAAACTCGTCCGAGAATTTTTGGAGTGTTCCTTTTGACATA
ACACCTCTAGAAGTAGTTGAGGGTGTTATGTTTGGTATGATGGAGATTGAAGTGTTTACTGTTTACTGGAATGTAGTTGGTTTACTTGGAAGGGGGAAAGGACTG
CTATTGTAG
Protein sequenceShow/hide protein sequence
MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENFWSVPFDITPLEVVEGVMFGMMEIEVFTVYWNVVGLLGRGKGL
LL