; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007053 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007053
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosomal protein L18ae family
Genome locationchr6:48379500..48383726
RNA-Seq ExpressionLag0007053
SyntenyLag0007053
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459564.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo]1.1e-6091.54Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        + +++QTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGF FPLMWYYATILYFWNARR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHL
        DPRERAGLAASAIAALACS+ILL+VVAV L
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHL

XP_011648592.1 uncharacterized protein LOC101207093 isoform X1 [Cucumis sativus]6.5e-6182.07Show/hide
Query:  LFINSGAEIGYCKLEDARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPL
        L ++S    G+    + +++QTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIR+KYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FPL
Subjt:  LFINSGAEIGYCKLEDARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPL

Query:  MWYYATILYFWNARRDPRERAGLAASAIAALACSVILLVVVAVHL
        +WYYATILYFWNARRDPRERAGLAASAIAALACS++LL+VVAV L
Subjt:  MWYYATILYFWNARRDPRERAGLAASAIAALACSVILLVVVAVHL

XP_022946692.1 uncharacterized protein LOC111450686 [Cucurbita moschata]2.9e-6192.37Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        +A+I+ TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDASDHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFP+MWYYATILYFWN+RR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHLL
        DPRERAGLAAS+IAALACSVILLVVVAV LL
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHLL

XP_022999414.1 uncharacterized protein LOC111493795 [Cucurbita maxima]7.7e-6292.37Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        +A+I+ TVQLVKSVSD+HLDLLRP+ARICSIFKGQGKDASDHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFP+MWYYATILYFWN+RR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHLL
        DPRERAGLAAS+IAALACSVILLVVVAVHLL
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHLL

XP_038889607.1 uncharacterized protein LOC120079478 [Benincasa hispida]1.0e-6193.85Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        + +I+QTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGF FPLMWYYATILYFWNARR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHL
        DPRERAGLAASAIAALACS+ILLVVVAV L
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHL

TrEMBL top hitse value%identityAlignment
A0A0A0LKM2 Uncharacterized protein3.2e-6182.07Show/hide
Query:  LFINSGAEIGYCKLEDARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPL
        L ++S    G+    + +++QTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIR+KYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FPL
Subjt:  LFINSGAEIGYCKLEDARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPL

Query:  MWYYATILYFWNARRDPRERAGLAASAIAALACSVILLVVVAVHL
        +WYYATILYFWNARRDPRERAGLAASAIAALACS++LL+VVAV L
Subjt:  MWYYATILYFWNARRDPRERAGLAASAIAALACSVILLVVVAVHL

A0A1S3CAZ9 uncharacterized protein LOC1034986585.4e-6191.54Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        + +++QTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGF FPLMWYYATILYFWNARR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHL
        DPRERAGLAASAIAALACS+ILL+VVAV L
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHL

A0A5D3CGZ6 60S ribosomal protein L18a-15.4e-6191.54Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        + +++QTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGF FPLMWYYATILYFWNARR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHL
        DPRERAGLAASAIAALACS+ILL+VVAV L
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHL

A0A6J1G4J6 uncharacterized protein LOC1114506861.4e-6192.37Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        +A+I+ TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDASDHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFP+MWYYATILYFWN+RR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHLL
        DPRERAGLAAS+IAALACSVILLVVVAV LL
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHLL

A0A6J1KAT7 uncharacterized protein LOC1114937953.7e-6292.37Show/hide
Query:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR
        +A+I+ TVQLVKSVSD+HLDLLRP+ARICSIFKGQGKDASDHIR+KYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFP+MWYYATILYFWN+RR
Subjt:  DARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARR

Query:  DPRERAGLAASAIAALACSVILLVVVAVHLL
        DPRERAGLAAS+IAALACSVILLVVVAVHLL
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVHLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54217.1 Ribosomal protein L18ae family3.7e-2265.88Show/hide
Query:  KYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAGLAASAIAALACSVILLVVVAV
        KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF+FP  WY AT LY  +   RDPRER+GLAASAIAAL  SV L++ V V
Subjt:  KYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAGLAASAIAALACSVILLVVVAV

AT1G54217.2 Ribosomal protein L18ae family9.8e-2361.29Show/hide
Query:  DASDHIRTKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAGLAASAIAALACSVILLVVVAV
        D  +  + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF+FP  WY AT LY  +   RDPRER+GLAASAIAAL  SV L++ V V
Subjt:  DASDHIRTKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAGLAASAIAALACSVILLVVVAV

AT4G26060.1 Ribosomal protein L18ae family5.0e-3560Show/hide
Query:  RIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRD
        R + + +LVKSV+DKH  L+RP A+  S      KDA    + +YTL++DV++ + G+YDKPLPCFGCGIGWFSFLLGF+FP +WYYAT+LYF N  R+D
Subjt:  RIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRD

Query:  PRERAGLAASAIAALACSVILLVVV
        PRERAGLAASAI A+  S++LLV+V
Subjt:  PRERAGLAASAIAALACSVILLVVV

AT5G57060.1 FUNCTIONS IN: molecular_function unknown4.7e-3357.5Show/hide
Query:  QLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAG
        +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF+FP +WYYA  LYF N  R+DPRERAG
Subjt:  QLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAG

Query:  LAASAIAALACSVILLVVVA
        LAASAI A+  S++LLV+ A
Subjt:  LAASAIAALACSVILLVVVA

AT5G57060.2 BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1)1.1e-2966.3Show/hide
Query:  KDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAGLAASAIAALACSVILLVVVA
        KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF+FP +WYYA  LYF N  R+DPRERAGLAASAI A+  S++LLV+ A
Subjt:  KDASDHIRTKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWN-ARRDPRERAGLAASAIAALACSVILLVVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGGGAAGACTTGGCCTGCAAGACAGTAAACTTGCACACCGGTGTGGTGCTCGCCACACCGGCTCCGATGCTTAAGTTAGCAAGCAGAATCGTAGGGAGTGGAAA
AGCGTTTCGGGACAAACCAAGCGAAATCGGGGCAGCCAGAGGCGGTGGGGACCAAACGAAACCGAACGGGCTCGGCCCGCACAAGCGGGCCGAGGGTCGGCCTCGCCCCA
TGGCCGAGGCTGACCATGTGCTCAGCCTCGGCCTTGGGTCGAGGCCGAGCAGGGGGTCGGGCCAAGGCCCGACCCCTTCGATCTTGGCTCGTCCCGCTTGCCAGTTTTGC
CTCCTTGGTCCATCTCCCAGCCCAATTTCTCCCCGGTTGTCCTCTTCAAGAAAAGCGTGTTCTTCTGTTCGTTTCTCCGCCAATTTCGTCCCTGATCCGTGGAGAGCGAG
AGAAATTGCAGTTTCAGTCGCTTTTTCTACTCACCTCTTCATCAATTCGGGTGCGGAAATTGGATACTGCAAACTTGAAGATGCAAGAATTGAGCAGACGGTGCAACTGG
TGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTTCAGACCATATAAGGACCAAGTAT
ACACTTCTCAGAGATGTTGAGGATTCTCAAGTAGGGCTATATGACAAGCCTCTCCCATGTTTTGGCTGTGGCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTGTTCCC
ACTAATGTGGTACTATGCCACAATTCTCTACTTCTGGAATGCCCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGCACTTGCATGCTCGGTCA
TCTTGTTGGTCGTGGTAGCTGTTCACCTATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGGGAAGACTTGGCCTGCAAGACAGTAAACTTGCACACCGGTGTGGTGCTCGCCACACCGGCTCCGATGCTTAAGTTAGCAAGCAGAATCGTAGGGAGTGGAAA
AGCGTTTCGGGACAAACCAAGCGAAATCGGGGCAGCCAGAGGCGGTGGGGACCAAACGAAACCGAACGGGCTCGGCCCGCACAAGCGGGCCGAGGGTCGGCCTCGCCCCA
TGGCCGAGGCTGACCATGTGCTCAGCCTCGGCCTTGGGTCGAGGCCGAGCAGGGGGTCGGGCCAAGGCCCGACCCCTTCGATCTTGGCTCGTCCCGCTTGCCAGTTTTGC
CTCCTTGGTCCATCTCCCAGCCCAATTTCTCCCCGGTTGTCCTCTTCAAGAAAAGCGTGTTCTTCTGTTCGTTTCTCCGCCAATTTCGTCCCTGATCCGTGGAGAGCGAG
AGAAATTGCAGTTTCAGTCGCTTTTTCTACTCACCTCTTCATCAATTCGGGTGCGGAAATTGGATACTGCAAACTTGAAGATGCAAGAATTGAGCAGACGGTGCAACTGG
TGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTTCAGACCATATAAGGACCAAGTAT
ACACTTCTCAGAGATGTTGAGGATTCTCAAGTAGGGCTATATGACAAGCCTCTCCCATGTTTTGGCTGTGGCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTGTTCCC
ACTAATGTGGTACTATGCCACAATTCTCTACTTCTGGAATGCCCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGCACTTGCATGCTCGGTCA
TCTTGTTGGTCGTGGTAGCTGTTCACCTATTATAG
Protein sequenceShow/hide protein sequence
MRGEDLACKTVNLHTGVVLATPAPMLKLASRIVGSGKAFRDKPSEIGAARGGGDQTKPNGLGPHKRAEGRPRPMAEADHVLSLGLGSRPSRGSGQGPTPSILARPACQFC
LLGPSPSPISPRLSSSRKACSSVRFSANFVPDPWRAREIAVSVAFSTHLFINSGAEIGYCKLEDARIEQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRTKY
TLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFLFPLMWYYATILYFWNARRDPRERAGLAASAIAALACSVILLVVVAVHLL