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Lag0007076 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007076
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-box protein 1a-like
Genome locationchr6:48491752..48492474
RNA-Seq ExpressionLag0007076
SyntenyLag0007076
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3439695.1 hypothetical protein FNV43_RR17973 [Rhamnella rubrinervis]9.3e-4092.13Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
XP_004306863.1 PREDICTED: RING-box protein 1a-like [Fragaria vesca subsp. vesca]3.5e-3989.89Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPM+PVGE SSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
XP_007218617.1 RING-box protein 1a [Prunus persica]2.1e-3991.01Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
XP_015889019.1 RING-box protein 1a [Ziziphus jujuba]9.3e-4092.13Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
XP_038889978.1 RING-box protein 1a-like isoform X2 [Benincasa hispida]2.7e-3997.59Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGT
        MATLDSDVPMVP G+ASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGT
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGT
TrEMBL top hitse value%identityAlignment
A0A4Y1R040 PREDICTED: RING-box1.0e-3991.01Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
A0A6J1DPM4 RING-box protein 1a-like4.5e-4092.13Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
A0A6J5U0H2 RING-type domain-containing protein1.0e-3991.01Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
A0A6P4A6G4 RING-box protein 1a4.5e-4092.13Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
M5X2V0 RING-type domain-containing protein1.0e-3991.01Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX11.4e-2770Show/hide
Query:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        M    +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
P62878 E3 ubiquitin-protein ligase RBX11.4e-2770Show/hide
Query:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        M    +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
Q940X7 RING-box protein 1a5.0e-3682.22Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
Q9M2B0 RING-box protein 1b1.2e-2973.33Show/hide
Query:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MA+L+SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
Q9W5E1 RING-box protein 1A1.1e-2781.43Show/hide
Query:  PSSTKK--PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        PSS+ K   KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  PSSTKK--PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
Arabidopsis top hitse value%identityAlignment
AT3G42830.1 RING/U-box superfamily protein8.4e-3173.33Show/hide
Query:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MA+L+SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
AT5G20570.1 RING-box 13.5e-3782.22Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWG  +++ +
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLN
AT5G20570.2 RING-box 13.0e-3689.02Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
AT5G20570.3 RING-box 15.3e-3367.59Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAW                   IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Query:  GTFSYSLN
        G  +++ +
Subjt:  GTFSYSLN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTTTGGACTCCGACGTGCCGATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAA
CGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCTAGCGCAACCA
GCGAGGAATGTACTGTGGCGTGGGGTACGTTTTCTTATTCCCTCAACCTATCCCCAACCCATTCACACAGATACAATGTGCTATTATTTTCTGTCTTTGTTCGCTCCTTA
CGGATGCCGAGGTGGAGGATTGGGCCTCTCTGCGGAATATTTAGAGCAATATATTATTTCAAATTAGTAGGATACCGAAGGGTGGTCTCTCCATGTCAGTGTTTACTTTT
CAGTCAATTCCTCTGCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTTTGGACTCCGACGTGCCGATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAA
CGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCTAGCGCAACCA
GCGAGGAATGTACTGTGGCGTGGGGTACGTTTTCTTATTCCCTCAACCTATCCCCAACCCATTCACACAGATACAATGTGCTATTATTTTCTGTCTTTGTTCGCTCCTTA
CGGATGCCGAGGTGGAGGATTGGGCCTCTCTGCGGAATATTTAGAGCAATATATTATTTCAAATTAGTAGGATACCGAAGGGTGGTCTCTCCATGTCAGTGTTTACTTTT
CAGTCAATTCCTCTGCCCTTAG
Protein sequenceShow/hide protein sequence
MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGTFSYSLNLSPTHSHRYNVLLFSVFVRSL
RMPRWRIGPLCGIFRAIYYFKLVGYRRVVSPCQCLLFSQFLCP