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Lag0007126 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007126
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationScvUqRz_1112_HRSCAF_1948:56159..56496
RNA-Seq ExpressionLag0007126
SyntenyLag0007126
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PPR94748.1 hypothetical protein GOBAR_AA25922 [Gossypium barbadense]9.3e-1658.75Show/hide
Query:  DKVHYIVRFRDWRLTHSVTLALDVPKMG-----------------------AYPKENPVFLGREYLNRTNRPVVCFGTKQ
        DKVHYIV FRDWRLTHSVTLALDVPKMG                        YPKENPV LGREYLNR N PV  F ++Q
Subjt:  DKVHYIVRFRDWRLTHSVTLALDVPKMG-----------------------AYPKENPVFLGREYLNRTNRPVVCFGTKQ

QHQ73422.1 hypothetical protein [Allium tuberosum]1.4e-1958.65Show/hide
Query:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR
        TRNPADKVHYIV FRDWRLTHSVTLALDVPKMG            P   P FL          +YL   NRTN     +CFGTKQLELGS+N N+YYPY 
Subjt:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR

Query:  GSFN
         S N
Subjt:  GSFN

QIB71948.1 hypothetical protein [Fagonia indica]1.1e-1176.6Show/hide
Query:  KENPVFLGREYLNRTNRPV---VCFGTKQLELGSLNWNVYYPYRGSF
        +EN V +GREYLNRTN PV   VCF TKQLELGS+NWNVYYPYRG F
Subjt:  KENPVFLGREYLNRTNRPV---VCFGTKQLELGSLNWNVYYPYRGSF

YP_002720156.1 ORF126 [Jatropha curcas]6.2e-2061.36Show/hide
Query:  MPTRNPADKVHYIVRFRDWRLTHSVTLALDVPK------------------------MGAYPKENPVFLGREYLNRTNRPVVCFGTKQ
        MP RNP DKVHYIVRFRDWRLTHSVTLALDVPK                          AYPKENPV LGREYLNRTNRPV  F ++Q
Subjt:  MPTRNPADKVHYIVRFRDWRLTHSVTLALDVPK------------------------MGAYPKENPVFLGREYLNRTNRPVVCFGTKQ

YP_009732984.1 hypothetical chloroplast RF15 [Allium przewalskianum]1.4e-1958.65Show/hide
Query:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR
        TRNPADKVHYIV FRDWRLTHSVTLALDVPKMG            P   P FL          +YL   NRTN     +CFGTKQLELGS+N N+YYPY 
Subjt:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR

Query:  GSFN
         S N
Subjt:  GSFN

TrEMBL top hitse value%identityAlignment
A0A0A0LBC9 Uncharacterized protein2.8e-2696.49Show/hide
Query:  KMGAYPKENPVFLGREYLNRTNRPVVCFGTKQLELGSLNWNVYYPYRGSFNGEDPST
        ++GAYPKENPVFLGREYLNRTNRPVVCFGTKQLELGSLNWNVYYPYRGSFNGEDPST
Subjt:  KMGAYPKENPVFLGREYLNRTNRPVVCFGTKQLELGSLNWNVYYPYRGSFNGEDPST

A0A6B9VYN5 Uncharacterized protein6.7e-2058.65Show/hide
Query:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR
        TRNPADKVHYIV FRDWRLTHSVTLALDVPKMG            P   P FL          +YL   NRTN     +CFGTKQLELGS+N N+YYPY 
Subjt:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR

Query:  GSFN
         S N
Subjt:  GSFN

A0A6C0M5P3 Hypothetical chloroplast RF156.7e-2058.65Show/hide
Query:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR
        TRNPADKVHYIV FRDWRLTHSVTLALDVPKMG            P   P FL          +YL   NRTN     +CFGTKQLELGS+N N+YYPY 
Subjt:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR

Query:  GSFN
         S N
Subjt:  GSFN

A0A6M6CZR8 Hypothetical chloroplast RF156.7e-2058.65Show/hide
Query:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR
        TRNPADKVHYIV FRDWRLTHSVTLALDVPKMG            P   P FL          +YL   NRTN     +CFGTKQLELGS+N N+YYPY 
Subjt:  TRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAY----------PKENPVFL--------GREYL---NRTN--RPVVCFGTKQLELGSLNWNVYYPYR

Query:  GSFN
         S N
Subjt:  GSFN

C0LEB8 ORF1263.0e-2061.36Show/hide
Query:  MPTRNPADKVHYIVRFRDWRLTHSVTLALDVPK------------------------MGAYPKENPVFLGREYLNRTNRPVVCFGTKQ
        MP RNP DKVHYIVRFRDWRLTHSVTLALDVPK                          AYPKENPV LGREYLNRTNRPV  F ++Q
Subjt:  MPTRNPADKVHYIVRFRDWRLTHSVTLALDVPK------------------------MGAYPKENPVFLGREYLNRTNRPVVCFGTKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACCCGTAACCCAGCAGATAAAGTACATTACATAGTCCGTTTTAGGGATTGGCGACTTACCCATTCAGTGACTTTGGCACTGGACGTTCCAAAAATGGGGGCCTA
CCCGAAAGAGAATCCAGTGTTTCTTGGTCGTGAATATCTGAATAGGACGAACCGCCCCGTGGTTTGCTTCGGAACAAAACAATTAGAATTAGGCTCGTTGAACTGGAATG
TGTATTATCCATATAGGGGATCTTTCAATGGAGAAGATCCGTCGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCACCCGTAACCCAGCAGATAAAGTACATTACATAGTCCGTTTTAGGGATTGGCGACTTACCCATTCAGTGACTTTGGCACTGGACGTTCCAAAAATGGGGGCCTA
CCCGAAAGAGAATCCAGTGTTTCTTGGTCGTGAATATCTGAATAGGACGAACCGCCCCGTGGTTTGCTTCGGAACAAAACAATTAGAATTAGGCTCGTTGAACTGGAATG
TGTATTATCCATATAGGGGATCTTTCAATGGAGAAGATCCGTCGACCTAA
Protein sequenceShow/hide protein sequence
MPTRNPADKVHYIVRFRDWRLTHSVTLALDVPKMGAYPKENPVFLGREYLNRTNRPVVCFGTKQLELGSLNWNVYYPYRGSFNGEDPST