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Lag0007235 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007235
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionS4 RNA-binding domain-containing protein
Genome locationScvUqRz_1244_HRSCAF_2115:15382..15684
RNA-Seq ExpressionLag0007235
SyntenyLag0007235
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015860 - purine nucleoside transmembrane transport (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:1904823 - purine nucleobase transmembrane transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0005345 - purine nucleobase transmembrane transporter activity (molecular function)
GO:0015211 - purine nucleoside transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB45754.1 hypothetical protein L484_003838 [Morus notabilis]1.1e-1278.33Show/hide
Query:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPPHSNNRRKENARTVERPPASNF
        MVHRLF+VLAREPKR R LPTVLDLRPGI PLSNRNQPP         ARTVERPPASNF
Subjt:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPPHSNNRRKENARTVERPPASNF
GEU50674.1 putative reverse transcriptase domain, ribonuclease H-like domain protein [Tanacetum cinerariifolium]7.5e-1486.27Show/hide
Query:  WVQLDESVKSRSTYVAARMVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLS
        WVQLDES+KSRSTYVAARMVHRLFLVLA EPK+ R LPTVLDLRPGI P S
Subjt:  WVQLDESVKSRSTYVAARMVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLS
KAF5753140.1 hypothetical protein HanXRQr2_MTg0834811 [Helianthus annuus]1.4e-0791.89Show/hide
Query:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQ
        MVHRLFLVLAREPKR R LPTVLDLRPGI PLSNRNQ
Subjt:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQ
QHN95475.1 ATP synthase protein [Arachis hypogaea]5.7e-2277.91Show/hide
Query:  VVLLLVWVQLDESVKSRSTYVAARMVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPPHSNNRRKENARTVERPPASNFRT
        VVLLLVWV LDES+KSR TY+AARMV RLFLVLAREPKR R LPTVLD RPGI PLSNRNQPP         ARTVERPPAS FRT
Subjt:  VVLLLVWVQLDESVKSRSTYVAARMVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPPHSNNRRKENARTVERPPASNFRT
YP_009526589.1 hypothetical protein [Ammopiptanthus mongolicus]8.0e-0887.18Show/hide
Query:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPP
        MV RLF+VLAREPKR R LPTVLDLRPGI PLSNRNQPP
Subjt:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPP
TrEMBL top hitse value%identityAlignment
A0A385G2D1 Uncharacterized protein3.9e-0887.18Show/hide
Query:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPP
        MV RLF+VLAREPKR R LPTVLDLRPGI PLSNRNQPP
Subjt:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPP
A0A6L2KRZ9 Putative reverse transcriptase domain, ribonuclease H-like domain protein3.6e-1486.27Show/hide
Query:  WVQLDESVKSRSTYVAARMVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLS
        WVQLDES+KSRSTYVAARMVHRLFLVLA EPK+ R LPTVLDLRPGI P S
Subjt:  WVQLDESVKSRSTYVAARMVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLS
A0A6S7L336 S4 RNA-binding domain-containing protein6.6e-0891.89Show/hide
Query:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQ
        MVHRLFLVLAREPKR R LPTVLDLRPGI PLSNRNQ
Subjt:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQ
A0A7S9H536 Uncharacterized protein1.1e-0789.19Show/hide
Query:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQ
        MVHRLF+VLAREPKR R LPTVLDLRPGI PLSNRNQ
Subjt:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQ
W9QPI5 Probable purine permease5.2e-1378.33Show/hide
Query:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPPHSNNRRKENARTVERPPASNF
        MVHRLF+VLAREPKR R LPTVLDLRPGI PLSNRNQPP         ARTVERPPASNF
Subjt:  MVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPPHSNNRRKENARTVERPPASNF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGATACTTTCCGTTTCGTCGAGCCCCGAGCTTGTGGTCCTCCTTTTAGTGTGGGTTCAATTGGATGAATCTGTCAAGTCAAGGTCAACGTACGTAGCAGCAAGGAT
GGTGCATCGCCTATTTCTCGTTCTCGCTCGGGAGCCAAAACGAAAACGCCAGCTACCTACTGTACTGGACCTTCGACCAGGTATTCGACCCTTGTCGAATCGGAACCAAC
CACCCCACTCTAATAATAGGAGAAAGGAAAACGCTCGAACAGTTGAGCGGCCGCCGGCCAGCAACTTCCGTACACAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGATACTTTCCGTTTCGTCGAGCCCCGAGCTTGTGGTCCTCCTTTTAGTGTGGGTTCAATTGGATGAATCTGTCAAGTCAAGGTCAACGTACGTAGCAGCAAGGAT
GGTGCATCGCCTATTTCTCGTTCTCGCTCGGGAGCCAAAACGAAAACGCCAGCTACCTACTGTACTGGACCTTCGACCAGGTATTCGACCCTTGTCGAATCGGAACCAAC
CACCCCACTCTAATAATAGGAGAAAGGAAAACGCTCGAACAGTTGAGCGGCCGCCGGCCAGCAACTTCCGTACACAGATATAG
Protein sequenceShow/hide protein sequence
MLILSVSSSPELVVLLLVWVQLDESVKSRSTYVAARMVHRLFLVLAREPKRKRQLPTVLDLRPGIRPLSNRNQPPHSNNRRKENARTVERPPASNFRTQI