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Lag0007236 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007236
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionS4 RNA-binding domain-containing protein
Genome locationScvUqRz_1244_HRSCAF_2115:15865..16951
RNA-Seq ExpressionLag0007236
SyntenyLag0007236
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0044772 - mitotic cell cycle phase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4074754.1 unnamed protein product [Lactuca saligna]1.9e-1171.19Show/hide
Query:  MFEITITRKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNV
        MF +T TRKPP      +LKGPVTSFVPSWLRL T LTLWPCR  +AEAK LKSALR V
Subjt:  MFEITITRKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNV

KAD4180521.1 hypothetical protein E3N88_29112 [Mikania micrantha]1.3e-1282.69Show/hide
Query:  TLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQS
        +LKGPVTSFVPSWLRL T LTLWPCR  LAEAK LKSALR VASVGL VQQ+
Subjt:  TLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQS

KAG6575536.1 hypothetical protein SDJN03_26175, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1086.36Show/hide
Query:  AFLSLGKVTRRRREPFNMFTKTSDLLEKGGSISRGDDFASPEEK
        AFLSLGKVT +R+EPFNMFTKTS LLEKGGSISRGD FASPEE+
Subjt:  AFLSLGKVTRRRREPFNMFTKTSDLLEKGGSISRGDDFASPEEK

KAG8362775.1 hypothetical protein BUALT_BualtUnG0042600 [Buddleja alternifolia]1.4e-1772.29Show/hide
Query:  RKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL
        +K  PY      KGPVTSFVPSWLRL TE       PPLAEAK LKSALRNVASVGLSVQQSTSS  EGY TYKSLPV T+AL
Subjt:  RKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL

YP_008992401.1 hypothetical protein Salmi_Mp135 [Salvia miltiorrhiza]3.4e-1668.67Show/hide
Query:  RKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL
        +K  PY      K PVTSFVPSWLRL TE       PPLAEAK LKSALRN+ASVGLSVQQSTSS  EGY TYKS+PV T+AL
Subjt:  RKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL

TrEMBL top hitse value%identityAlignment
A0A2G2YYI4 Uncharacterized protein4.8e-0876.6Show/hide
Query:  PPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL
        PPLAEAK LK+ALR V SV LSVQQ TSS  EGY TYKSLPV T+AL
Subjt:  PPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL

A0A4D8XWS2 Uncharacterized protein8.7e-1081.25Show/hide
Query:  RPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL
        R PLAEAK LKSALRN+ASVGLSVQQSTSS  EGY TYKS+PV T+AL
Subjt:  RPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL

A0A5N6N201 Uncharacterized protein6.4e-1382.69Show/hide
Query:  TLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQS
        +LKGPVTSFVPSWLRL T LTLWPCR  LAEAK LKSALR VASVGL VQQ+
Subjt:  TLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQS

A0A6S7L6D6 S4 RNA-binding domain-containing protein9.3e-1271.19Show/hide
Query:  MFEITITRKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNV
        MF +T TRKPP      +LKGPVTSFVPSWLRL T LTLWPCR  +AEAK LKSALR V
Subjt:  MFEITITRKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNV

V9P5P1 Uncharacterized protein1.6e-1668.67Show/hide
Query:  RKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL
        +K  PY      K PVTSFVPSWLRL TE       PPLAEAK LKSALRN+ASVGLSVQQSTSS  EGY TYKS+PV T+AL
Subjt:  RKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAAATTACTATCACAAGAAAGCCGCCCCCCTACCCTATCTCTAAAACTCTAAAAGGGCCCGTCACTTCGTTCGTACCTTCTTGGCTTAGGCTTCCAACTGAACT
GACTTTATGGCCTTGCCGCCCGCCGCTAGCAGAAGCTAAGCACTTGAAAAGCGCGCTAAGAAACGTTGCTTCTGTCGGCCTTTCTGTGCAACAGTCCACCAGTAGCGTAG
GAGAGGGTTACAGTACATACAAGAGTCTTCCCGTTTTTACGAAGGCACTCGAAGTGAGACGGCACCGTCTTGTGCAACGCAACGATAATTGGCCCTCTATCATCTTCGAG
ACGGTAGACTTGGTAAAAGGGCCCCGACGGATTTCCAGAATTCGAGTTCGACCGCTGCAGCCCCTTTTTGGGGGATCAAGTTCCCGGCCCGAGACGCGTTCGTTGACAAA
ACCGCCGCGCACTGCGCTTTCCCTTGCCCAGATGTTCGCCTTTCTCAGTCTTGGAAAGGTGACCCGCCGAAGACGGGAGCCCTTTAACATGTTTACGAAGACCTCCGACT
TATTAGAGAAAGGGGGTTCGATCAGTAGAGGGGACGACTTTGCCTCCCCGGAAGAAAAAGAGCCCCGCTCGAGGGACGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAAATTACTATCACAAGAAAGCCGCCCCCCTACCCTATCTCTAAAACTCTAAAAGGGCCCGTCACTTCGTTCGTACCTTCTTGGCTTAGGCTTCCAACTGAACT
GACTTTATGGCCTTGCCGCCCGCCGCTAGCAGAAGCTAAGCACTTGAAAAGCGCGCTAAGAAACGTTGCTTCTGTCGGCCTTTCTGTGCAACAGTCCACCAGTAGCGTAG
GAGAGGGTTACAGTACATACAAGAGTCTTCCCGTTTTTACGAAGGCACTCGAAGTGAGACGGCACCGTCTTGTGCAACGCAACGATAATTGGCCCTCTATCATCTTCGAG
ACGGTAGACTTGGTAAAAGGGCCCCGACGGATTTCCAGAATTCGAGTTCGACCGCTGCAGCCCCTTTTTGGGGGATCAAGTTCCCGGCCCGAGACGCGTTCGTTGACAAA
ACCGCCGCGCACTGCGCTTTCCCTTGCCCAGATGTTCGCCTTTCTCAGTCTTGGAAAGGTGACCCGCCGAAGACGGGAGCCCTTTAACATGTTTACGAAGACCTCCGACT
TATTAGAGAAAGGGGGTTCGATCAGTAGAGGGGACGACTTTGCCTCCCCGGAAGAAAAAGAGCCCCGCTCGAGGGACGACTGA
Protein sequenceShow/hide protein sequence
MFEITITRKPPPYPISKTLKGPVTSFVPSWLRLPTELTLWPCRPPLAEAKHLKSALRNVASVGLSVQQSTSSVGEGYSTYKSLPVFTKALEVRRHRLVQRNDNWPSIIFE
TVDLVKGPRRISRIRVRPLQPLFGGSSSRPETRSLTKPPRTALSLAQMFAFLSLGKVTRRRREPFNMFTKTSDLLEKGGSISRGDDFASPEEKEPRSRDD