CuGenDBv2

Gene ID	Lag0007242
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Complex1_30kDa domain-containing protein
Genome location	ScvUqRz_1244_HRSCAF_2115:34906..36790
RNA-Seq Expression	Lag0007242
Synteny	Lag0007242
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3452243.1 hypothetical protein FNV43_RR08341 [Rhamnella rubrinervis]

1.7e-09

43.7

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Query:  GLLLQ----NQVA-----KTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDRSAGAVTQRG
        GLLLQ     +VA     +TGYYAYST SDCDTIPLPAPIHVR YLYA T+R    +S                              +DRSAGA +  G
Subjt:  GLLLQ----NQVA-----KTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDRSAGAVTQRG

Query:  SPALQIQKGALANMTMLLP
        SPAL      L     LLP
Subjt:  SPALQIQKGALANMTMLLP

KAF4349912.1 hypothetical protein G4B88_002334 [Cannabis sativa]

8.3e-25

42.92

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Query:  FMLPHVENESNQFSVFQAP-------AGPYLSLTRSIDCSKVEVVSLSQIE----------------------------------------RHTTNSFEA
        FMLP+VENESNQFS+   P           LS T SI  S    +  S I+                                        +HTTNSFEA
Subjt:  FMLPHVENESNQFSVFQAP-------AGPYLSLTRSIDCSKVEVVSLSQIE----------------------------------------RHTTNSFEA

Query:  TITTEAGLLL----------QNQVAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDRSA
        T TTEAGLL+          + +  +       T SDCDTIPLPAPIHVR YLYA  +  KDSY  SETR    + N     PLA LVNSN SLLVDRSA
Subjt:  TITTEAGLLL----------QNQVAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDRSA

Query:  GAVTQRGSPALQIQKGALANMTMLLP
        GA TQRGSPAL      L     LLP
Subjt:  GAVTQRGSPALQIQKGALANMTMLLP

TrEMBL top hits

e value

%identity

Alignment

A0A7J6DUY4 Complex1_30kDa domain-containing protein

4.0e-25

42.92

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Query:  FMLPHVENESNQFSVFQAP-------AGPYLSLTRSIDCSKVEVVSLSQIE----------------------------------------RHTTNSFEA
        FMLP+VENESNQFS+   P           LS T SI  S    +  S I+                                        +HTTNSFEA
Subjt:  FMLPHVENESNQFSVFQAP-------AGPYLSLTRSIDCSKVEVVSLSQIE----------------------------------------RHTTNSFEA

Query:  TITTEAGLLL----------QNQVAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDRSA
        T TTEAGLL+          + +  +       T SDCDTIPLPAPIHVR YLYA  +  KDSY  SETR    + N     PLA LVNSN SLLVDRSA
Subjt:  TITTEAGLLL----------QNQVAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDRSA

Query:  GAVTQRGSPALQIQKGALANMTMLLP
        GA TQRGSPAL      L     LLP
Subjt:  GAVTQRGSPALQIQKGALANMTMLLP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCTACTGGTGGATCATATGTTCCCACCTATGTCTCTAGTGATGCTTCAACCTTCGTTTCTGCTGCTCCTGCTGGGTATAGAACTTAGAAGGGTACTGATCCTGGATCT
ACTACTGGCCCTGCTCGCTTTGTTTATGCTCCTGTGGGGACTGGCTTTCGAACTGACTCGACATCTGCTGAATAAATTCCTCCCCGGCCTTAAAGAAGGGAAGCCCACGG
AGCGGGACCGCTTTCCTTTTATGCTTCCCCACGTGGAAAATGAATCAAACCAGTTTTCCGTTTTCCAGGCGCCTGCTGGCCCTTATCTTAGCCTTACCCGTTCGATTGAT
TGTTCTAAAGTCGAAGTCGTTTCGTTAAGTCAAATTGAAAGACATACTACCAATTCCTTTGAAGCTACTATCACTACCGAAGCAGGCTTGCTCCTTCAAAATCAAGTGGC
TAAGACGGGCTATTATGCCTATTCAACAGATTCCGATTGTGATACAATTCCATTGCCTGCTCCTATTCATGTTCGTGTTTACTTGTATGCCAGAACAACAAGGTCTAAGG
ACTCCTATTCTAGGTCTGAAACTCGGTCTGTTTGCTCCTACAAAAACTCATACGACTGTTCCCCTTTAGCTCCTTTAGTCAATTCTAATTGTTCACTCTTAGTTGACCGT
TCCGCTGGGGCTGTAACTCAAAGAGGAAGCCCTGCGCTCCAGATCCAAAAGGGTGCTCTGGCTAATATGACTATGTTGCTTCCTCTTACGGGTCATCATACCAATTAG

mRNA sequence

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Protein sequence

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MLLVDHMFPPMSLVMLQPSFLLLLLGIELRRVLILDLLLALLALFMLLWGLAFELTRHLLNKFLPGLKEGKPTERDRFPFMLPHVENESNQFSVFQAPAGPYLSLTRSID
CSKVEVVSLSQIERHTTNSFEATITTEAGLLLQNQVAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDR
SAGAVTQRGSPALQIQKGALANMTMLLPLTGHHTN

Lag0007242 (gene) of Sponge gourd (AG-4) v1 genome