; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007246 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007246
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationScvUqRz_1244_HRSCAF_2115:42631..43779
RNA-Seq ExpressionLag0007246
SyntenyLag0007246
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2957479.1 Hypothetical predicted protein [Olea europaea subsp. europaea]9.7e-4275Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKAVTAAHVPAVWSDVAAVHVLHTSAPTTTNIGGS
        MSKPPAEQITEVG ESAGDPEKAAEQSVEG QPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK               AVHVLHTSAPTT NIGGS
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKAVTAAHVPAVWSDVAAVHVLHTSAPTTTNIGGS

Query:  TAVLRVSAAATWSDTLLQHSSSDFQQPMLRHDQSTSQPILRLTASTIS
        TAVL VSAAA WSD            PMLRH QSTSQPILRLTASTIS
Subjt:  TAVLRVSAAATWSDTLLQHSSSDFQQPMLRHDQSTSQPILRLTASTIS

CAN64513.1 hypothetical protein VITISV_004352 [Vitis vinifera]2.0e-2394.03Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEET QSQPNRLRS+GAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

KAA0042452.1 hypothetical protein E6C27_scaffold46442G00020 [Cucumis melo var. makuwa]1.1e-1692.73Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR
        MSKPPAEQITEVGSESAGDPEKAAEQSVEG QPTEC+PKSAGKEVEET +SQPNR
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR

KAB1227959.1 hypothetical protein CJ030_MR1G013839 [Morella rubra]1.1e-2192.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

KAB1227962.1 hypothetical protein CJ030_MR1G013842 [Morella rubra]1.1e-2192.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

TrEMBL top hitse value%identityAlignment
A0A5A7TGB2 Uncharacterized protein5.2e-1792.73Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR
        MSKPPAEQITEVGSESAGDPEKAAEQSVEG QPTEC+PKSAGKEVEET +SQPNR
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR

A0A6A1WRP5 PMD domain-containing protein5.4e-2292.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

A0A6A1WRS3 Uncharacterized protein5.4e-2292.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

A5AFS6 Uncharacterized protein9.8e-2494.03Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEET QSQPNRLRS+GAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

F6H890 Uncharacterized protein2.4e-2291.04Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEE  QSQPNRLRS+GAIP AAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGTGATCCAGAAAAGGCTGCTGAACAGAGTGTCGAAGGAACACAGCCTACCGAATGTGT
TCCGAAGTCCGCGGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAGCCGTTACAGCAGCCCACG
TTCCGGCAGTGTGGTCAGACGTTGCTGCAGTCCATGTCCTCCACACCTCAGCCCCAACCACAACCAACATAGGGGGCTCTACAGCGGTCCTCCGCGTCTCAGCTGCAGCA
ACCTGGAGTGACACGTTACTGCAGCATTCATCTTCGGATTTTCAGCAGCCCATGCTCAGGCATGACCAGTCCACGTCACAGCCCATTCTCAGACTGACAGCCTCTACGAT
AAGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGTGATCCAGAAAAGGCTGCTGAACAGAGTGTCGAAGGAACACAGCCTACCGAATGTGT
TCCGAAGTCCGCGGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAGCCGTTACAGCAGCCCACG
TTCCGGCAGTGTGGTCAGACGTTGCTGCAGTCCATGTCCTCCACACCTCAGCCCCAACCACAACCAACATAGGGGGCTCTACAGCGGTCCTCCGCGTCTCAGCTGCAGCA
ACCTGGAGTGACACGTTACTGCAGCATTCATCTTCGGATTTTCAGCAGCCCATGCTCAGGCATGACCAGTCCACGTCACAGCCCATTCTCAGACTGACAGCCTCTACGAT
AAGCAAGTGA
Protein sequenceShow/hide protein sequence
MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKAVTAAHVPAVWSDVAAVHVLHTSAPTTTNIGGSTAVLRVSAAA
TWSDTLLQHSSSDFQQPMLRHDQSTSQPILRLTASTISK