; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007248 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007248
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationScvUqRz_1244_HRSCAF_2115:44480..45229
RNA-Seq ExpressionLag0007248
SyntenyLag0007248
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR008686 - RNA-dependent RNA polymerase, mitoviral


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64513.1 hypothetical protein VITISV_004352 [Vitis vinifera]4.7e-1790.38Show/hide
Query:  INKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS
        +++LLTFKEQQLPDQERVGSRSPP PEPTYGPIPEQGQPPRSSQHRKGHQP+
Subjt:  INKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS
EEF23948.1 conserved hypothetical protein, partial [Ricinus communis]5.8e-1588.89Show/hide
Query:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSS
        HQLTFS FSQGINKLLTFKEQQLPDQERV SRSPP PEPTYG IPEQ QP RSS
Subjt:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSS
EEF27291.1 conserved hypothetical protein [Ricinus communis]2.9e-3880Show/hide
Query:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS
        HQLTFS FSQGINKLLTFKEQQLPDQERV SRSPP PEPTYG IPEQ QP RSSQHRKGHQP   ++ QTRTMK KGGSAPVSQHA  IREERRSPIISS
Subjt:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS

Query:  APFSAQRMVTRSMRARQTQP
        AP SAQRMVTR+     + P
Subjt:  APFSAQRMVTRSMRARQTQP
EEF44036.1 conserved hypothetical protein [Ricinus communis]3.9e-3572.79Show/hide
Query:  EYVRW-W------HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS
        E  RW W      HQLTFS FSQGINKLLTFKEQQL DQERV SRSPP PEPTYG IPEQ QP  SSQH+KGHQP   ++ QTRTMK KGGSAPVSQHA 
Subjt:  EYVRW-W------HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS

Query:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS
         I+EERR+ IISS+P SAQRMVTRSM ARQT    S
Subjt:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS
TrEMBL top hitse value%identityAlignment
A5AFS6 Uncharacterized protein2.3e-1790.38Show/hide
Query:  INKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS
        +++LLTFKEQQLPDQERVGSRSPP PEPTYGPIPEQGQPPRSSQHRKGHQP+
Subjt:  INKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS
B9RX07 Uncharacterized protein1.9e-3572.79Show/hide
Query:  EYVRW-W------HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS
        E  RW W      HQLTFS FSQGINKLLTFKEQQL DQERV SRSPP PEPTYG IPEQ QP  SSQH+KGHQP   ++ QTRTMK KGGSAPVSQHA 
Subjt:  EYVRW-W------HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS

Query:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS
         I+EERR+ IISS+P SAQRMVTRSM ARQT    S
Subjt:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS
B9TA22 Uncharacterized protein1.4e-3880Show/hide
Query:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS
        HQLTFS FSQGINKLLTFKEQQLPDQERV SRSPP PEPTYG IPEQ QP RSSQHRKGHQP   ++ QTRTMK KGGSAPVSQHA  IREERRSPIISS
Subjt:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS

Query:  APFSAQRMVTRSMRARQTQP
        AP SAQRMVTR+     + P
Subjt:  APFSAQRMVTRSMRARQTQP
B9TJL5 Uncharacterized protein (Fragment)2.8e-1588.89Show/hide
Query:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSS
        HQLTFS FSQGINKLLTFKEQQLPDQERV SRSPP PEPTYG IPEQ QP RSS
Subjt:  HQLTFSDFSQGINKLLTFKEQQLPDQERVGSRSPPSPEPTYGPIPEQGQPPRSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCATTCTGACGTTACGGCAGGGCAACGTACGTGCTTCGGGCAGAACCGTAAAATCCCCCCCGGTTTGCAAGACAATTTGGTTTTGACTAATGAATTCCGGCACCC
GGTCACGACGTCAATCGAGCGCGTCATCTTTAACCTTTCGGAACTGGCGGGGTACTGGGCACATATGATGAGAAAGGGCACCGGGGCTCCTTTCGTGATAATGCCGGATG
GCAGAGAGGGCAAGATGGTCTTGGAGTATGTCCGATGGTGGCATCAACTGACGTTTTCTGACTTCTCGCAAGGAATCAACAAGCTGTTGACATTCAAAGAGCAGCAACTC
CCTGATCAAGAAAGAGTTGGGAGTCGAAGTCCTCCTTCTCCTGAACCCACATATGGACCCATTCCCGAGCAGGGGCAGCCACCCAGATCATCGCAACATCGGAAAGGTCA
CCAGCCCAGCCTTACGAAAAAGGGGCAAACCCGGACCATGAAAGGAAAGGGAGGTTCAGCACCCGTCAGCCAGCATGCATCCCCCATCAGGGAGGAAAGAAGAAGTCCCA
TCATTTCTTCAGCACCGTTCTCGGCTCAACGGATGGTGACTCGAAGTATGAGGGCCCGCCAAACTCAACCGGCTCGCTCACATCTGCGTTCAAGAGTCGTAAGCCGAAAC
GGCAGCATCAGAGTTTACAGCTTCAGCTCCACCGGCTACACAGGAATCGCCAGCATCACGAGCACCATCTGCAGCACTCAAGGCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCATTCTGACGTTACGGCAGGGCAACGTACGTGCTTCGGGCAGAACCGTAAAATCCCCCCCGGTTTGCAAGACAATTTGGTTTTGACTAATGAATTCCGGCACCC
GGTCACGACGTCAATCGAGCGCGTCATCTTTAACCTTTCGGAACTGGCGGGGTACTGGGCACATATGATGAGAAAGGGCACCGGGGCTCCTTTCGTGATAATGCCGGATG
GCAGAGAGGGCAAGATGGTCTTGGAGTATGTCCGATGGTGGCATCAACTGACGTTTTCTGACTTCTCGCAAGGAATCAACAAGCTGTTGACATTCAAAGAGCAGCAACTC
CCTGATCAAGAAAGAGTTGGGAGTCGAAGTCCTCCTTCTCCTGAACCCACATATGGACCCATTCCCGAGCAGGGGCAGCCACCCAGATCATCGCAACATCGGAAAGGTCA
CCAGCCCAGCCTTACGAAAAAGGGGCAAACCCGGACCATGAAAGGAAAGGGAGGTTCAGCACCCGTCAGCCAGCATGCATCCCCCATCAGGGAGGAAAGAAGAAGTCCCA
TCATTTCTTCAGCACCGTTCTCGGCTCAACGGATGGTGACTCGAAGTATGAGGGCCCGCCAAACTCAACCGGCTCGCTCACATCTGCGTTCAAGAGTCGTAAGCCGAAAC
GGCAGCATCAGAGTTTACAGCTTCAGCTCCACCGGCTACACAGGAATCGCCAGCATCACGAGCACCATCTGCAGCACTCAAGGCACCTGA
Protein sequenceShow/hide protein sequence
MRHSDVTAGQRTCFGQNRKIPPGLQDNLVLTNEFRHPVTTSIERVIFNLSELAGYWAHMMRKGTGAPFVIMPDGREGKMVLEYVRWWHQLTFSDFSQGINKLLTFKEQQL
PDQERVGSRSPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISSAPFSAQRMVTRSMRARQTQPARSHLRSRVVSRN
GSIRVYSFSSTGYTGIASITSTICSTQGT