; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007254 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007254
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationScvUqRz_1244_HRSCAF_2115:64538..66127
RNA-Seq ExpressionLag0007254
SyntenyLag0007254
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024626776.2 uncharacterized protein LOC112416686 [Medicago truncatula]3.2e-0935.65Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG
        FQ+SLTGPA KW+T+LD +++ +F  L + F++QYSYN+D+ P RSDL+A++Q D +   +             PR+  K   KL    L      +M G
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG

Query:  NARPFFQTRLGLGAR
        +    F   +G+G +
Subjt:  NARPFFQTRLGLGAR

XP_039682864.1 uncharacterized protein LOC120575985 [Medicago truncatula]4.2e-0935.65Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG
        FQ+SLTGPA KW+T+LD +++ +F  L + F++QYSYN+D+ P RSDL+A++Q D +   +             PR+  K   KL    L      +M G
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG

Query:  NARPFFQTRLGLGAR
        +    F   +G+G +
Subjt:  NARPFFQTRLGLGAR

XP_039685658.1 uncharacterized protein LOC112418394 [Medicago truncatula]4.2e-0935.65Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG
        FQ+SLTGPA KW+T+LD +++ +F  L + F++QYSYN+D+ P RSDL+A++Q D +   +             PR+  K   KL    L      +M G
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG

Query:  NARPFFQTRLGLGAR
        +    F   +G+G +
Subjt:  NARPFFQTRLGLGAR

XP_039685668.1 uncharacterized protein LOC112421946 [Medicago truncatula]1.9e-0936.52Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG
        FQ+SLTGPA KW+T+LD +K+ +F  L + F++QYSYN+D+ P RSDL+A++Q D +   +             PR+  K   KL    L      +M G
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG

Query:  NARPFFQTRLGLGAR
        +    F   +G+G +
Subjt:  NARPFFQTRLGLGAR

XP_039686891.1 uncharacterized protein LOC112419339 [Medicago truncatula]4.2e-0935.65Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG
        FQ+SLTGPA KW+T+LD +++ +F  L + F++QYSYN+D+ P RSDL+A++Q D +   +             PR+  K   KL    L      +M G
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSI---EMDG

Query:  NARPFFQTRLGLGAR
        +    F   +G+G +
Subjt:  NARPFFQTRLGLGAR

TrEMBL top hitse value%identityAlignment
A0A1B5Z7M1 Retrotrans_gag domain-containing protein (Fragment)3.8e-0854.39Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD
        FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQKD +
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD

A0A1B5Z8M6 Retrotrans_gag domain-containing protein (Fragment)3.8e-0854.39Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD
        FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQKD +
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD

A0A2Z6PA57 Retrotrans_gag domain-containing protein (Fragment)3.8e-0854.39Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD
        FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQKD +
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD

A0A2Z6PGB7 Retrotrans_gag domain-containing protein2.9e-0854.39Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD
        FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQKD +
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD

A0A2Z6PHD8 Retrotrans_gag domain-containing protein3.8e-0854.39Show/hide
Query:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD
        FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQKD +
Subjt:  FQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCGGTCAGAAGATTCGGAGGGTGAGCAGCCACCGGTTCTCACCCCCAACACTAGTACGGTCAGCACGACAACCTCGGAATCAGTCATACTTGATTTGACTAGCCC
ACAGCTCGCCCCAAACCCTACCCAGCTTTCCAGGCCATCCAATCTCCGTCATTCCACTTTAGCTCACCTCCAACCACCTCGCCCCTATAGCTTATGGGCAAATCCCATTC
CCCCAGCGGGGATGAACGAAAAGACGAAGGGGCTGTCATCGTTCCAGAAGAGTCTTACGGGCCCTGCACTGAAATGGTTTACGTCACTAGATCATTCTAAGTTAGCCTCG
TTTGAGCAATTATCTCAAATGTTCATCGATCAGTACTCCTACAACTTAGATGTCAAACCAAAAAGATCTGATCTCGAGGCTCTAAGTCAGAAAGACCCAGACCACATTCC
AAAGCAGCACCTTTCCCCTTTTCCAAATTATCATAATAATAAGCCCCGTCTCCCTTCTAAAACGTCGAGAAAGCTCTGCGAGCTTCCCCTTTGCTCTATAGAAATGGATG
GAAATGCCCGCCCGTTCTTCCAAACGCGTCTTGGTCTTGGAGCAAGAACCTCCGCCCGCGGGCGGGCTTCCCTACTATTGGATCGTGAACCGATGCCGTATAGAAGACTC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCGGTCAGAAGATTCGGAGGGTGAGCAGCCACCGGTTCTCACCCCCAACACTAGTACGGTCAGCACGACAACCTCGGAATCAGTCATACTTGATTTGACTAGCCC
ACAGCTCGCCCCAAACCCTACCCAGCTTTCCAGGCCATCCAATCTCCGTCATTCCACTTTAGCTCACCTCCAACCACCTCGCCCCTATAGCTTATGGGCAAATCCCATTC
CCCCAGCGGGGATGAACGAAAAGACGAAGGGGCTGTCATCGTTCCAGAAGAGTCTTACGGGCCCTGCACTGAAATGGTTTACGTCACTAGATCATTCTAAGTTAGCCTCG
TTTGAGCAATTATCTCAAATGTTCATCGATCAGTACTCCTACAACTTAGATGTCAAACCAAAAAGATCTGATCTCGAGGCTCTAAGTCAGAAAGACCCAGACCACATTCC
AAAGCAGCACCTTTCCCCTTTTCCAAATTATCATAATAATAAGCCCCGTCTCCCTTCTAAAACGTCGAGAAAGCTCTGCGAGCTTCCCCTTTGCTCTATAGAAATGGATG
GAAATGCCCGCCCGTTCTTCCAAACGCGTCTTGGTCTTGGAGCAAGAACCTCCGCCCGCGGGCGGGCTTCCCTACTATTGGATCGTGAACCGATGCCGTATAGAAGACTC
TAA
Protein sequenceShow/hide protein sequence
MTRSEDSEGEQPPVLTPNTSTVSTTTSESVILDLTSPQLAPNPTQLSRPSNLRHSTLAHLQPPRPYSLWANPIPPAGMNEKTKGLSSFQKSLTGPALKWFTSLDHSKLAS
FEQLSQMFIDQYSYNLDVKPKRSDLEALSQKDPDHIPKQHLSPFPNYHNNKPRLPSKTSRKLCELPLCSIEMDGNARPFFQTRLGLGARTSARGRASLLLDREPMPYRRL