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Lag0007262 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007262
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon Tf2-2 polyprotein
Genome locationScvUqRz_1244_HRSCAF_2115:95800..96507
RNA-Seq ExpressionLag0007262
SyntenyLag0007262
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65836.1 hypothetical protein VITISV_025816 [Vitis vinifera]1.5e-0528.83Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV-NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACF
        K E  +++ D     +K  E     E  T +V   T+  GCFIC GP RA+DCP ++KLSAL+  D +G+  P  P  + +Q   ++     P++ S   
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV-NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACF

Query:  SYSPELNGVGKKVLEE-------AWHRKLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ
         ++  +NGV  K L +          R+     +   E+ +R+    SK ++  GV+   P+Q
Subjt:  SYSPELNGVGKKVLEE-------AWHRKLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ

RVW30894.1 Transposon Tf2-12 polyprotein [Vitis vinifera]4.3e-0528.75Show/hide
Query:  QQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACFSYSPEL
        ++ GW  + KK          T+ V    T+  GCFIC GP RA+DCP ++KLSAL+  D +G+  P+ P   +     ++     P++ S    ++  +
Subjt:  QQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACFSYSPEL

Query:  NGVGKKVLEE--AWHR--------KLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ
        NGV  K L +  A H         +LG+      E+ +R+    +K ++  GV+   P+Q
Subjt:  NGVGKKVLEE--AWHR--------KLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ

RVW55361.1 Transposon Tf2-2 polyprotein [Vitis vinifera]2.5e-0529.88Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC
        K E  + Q+ GW  + KK          T+ V    T+  GCFIC GP RA+DCP ++KLSAL+  + +GE  P  P   +     ++     P++ S  
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC

Query:  FSYSPELNGVGKKVLEE--AWHRKLG---MSCMGCR--EEVTRVH--ESKREQSVGVSTEKPLQ
          ++  +NGV  K L +  A H  +     + +G R  E+ +R+    SK ++  GV+   P++
Subjt:  FSYSPELNGVGKKVLEE--AWHRKLG---MSCMGCR--EEVTRVH--ESKREQSVGVSTEKPLQ

RVX16639.1 Transposon Tf2-2 polyprotein [Vitis vinifera]4.3e-0531.36Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC
        K E  + Q+ GW  + KK          T+ V    T+  GCFIC GP RA+DCP ++KLSAL+  + +G+  P  P   +     ++     P++ S  
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC

Query:  FSYSPELNGVGKKVLEEA
          ++  +NGV  K L ++
Subjt:  FSYSPELNGVGKKVLEEA

XP_010661270.1 PREDICTED: uncharacterized protein K02A2.6-like [Vitis vinifera]1.5e-0528.83Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV-NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACF
        K E  +++ D     +K  E     E  T +V   T+  GCFIC GP RA+DCP ++KLSAL+  D +G+  P  P  + +Q   ++     P++ S   
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV-NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACF

Query:  SYSPELNGVGKKVLEE-------AWHRKLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ
         ++  +NGV  K L +          R+     +   E+ +R+    SK ++  GV+   P+Q
Subjt:  SYSPELNGVGKKVLEE-------AWHRKLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ

TrEMBL top hitse value%identityAlignment
A0A438D626 Transposon Tf2-12 polyprotein2.1e-0528.75Show/hide
Query:  QQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACFSYSPEL
        ++ GW  + KK          T+ V    T+  GCFIC GP RA+DCP ++KLSAL+  D +G+  P+ P   +     ++     P++ S    ++  +
Subjt:  QQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACFSYSPEL

Query:  NGVGKKVLEE--AWHR--------KLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ
        NGV  K L +  A H         +LG+      E+ +R+    +K ++  GV+   P+Q
Subjt:  NGVGKKVLEE--AWHR--------KLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ

A0A438F5W3 Transposon Tf2-2 polyprotein1.2e-0529.88Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC
        K E  + Q+ GW  + KK          T+ V    T+  GCFIC GP RA+DCP ++KLSAL+  + +GE  P  P   +     ++     P++ S  
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC

Query:  FSYSPELNGVGKKVLEE--AWHRKLG---MSCMGCR--EEVTRVH--ESKREQSVGVSTEKPLQ
          ++  +NGV  K L +  A H  +     + +G R  E+ +R+    SK ++  GV+   P++
Subjt:  FSYSPELNGVGKKVLEE--AWHRKLG---MSCMGCR--EEVTRVH--ESKREQSVGVSTEKPLQ

A0A438F8H5 Transposon Tf2-2 polyprotein2.7e-0529.27Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC
        K E  + Q+ GW  + KK          T+ V    T+  GCFIC GP RA+DCP ++KLSAL+  + +G+  P  P   +     ++     P++ S  
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC

Query:  FSYSPELNGVGKKVLEE--AWHRKLG---MSCMGCR--EEVTRVH--ESKREQSVGVSTEKPLQ
          ++  +NGV  K L +  A H  +     + +G R  E+ +R+    SK ++  GV+   P++
Subjt:  FSYSPELNGVGKKVLEE--AWHRKLG---MSCMGCR--EEVTRVH--ESKREQSVGVSTEKPLQ

A0A438K606 Transposon Tf2-2 polyprotein2.1e-0531.36Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC
        K E  + Q+ GW  + KK          T+ V    T+  GCFIC GP RA+DCP ++KLSAL+  + +G+  P  P   +     ++     P++ S  
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV--NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSAC

Query:  FSYSPELNGVGKKVLEEA
          ++  +NGV  K L ++
Subjt:  FSYSPELNGVGKKVLEEA

A5BN76 Uncharacterized protein7.2e-0628.83Show/hide
Query:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV-NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACF
        K E  +++ D     +K  E     E  T +V   T+  GCFIC GP RA+DCP ++KLSAL+  D +G+  P  P  + +Q   ++     P++ S   
Subjt:  KGETSSRQQDGWSGEQKKGEEHATKELGTSLV-NLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACF

Query:  SYSPELNGVGKKVLEE-------AWHRKLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ
         ++  +NGV  K L +          R+     +   E+ +R+    SK ++  GV+   P+Q
Subjt:  SYSPELNGVGKKVLEE-------AWHRKLGMSCMGCREEVTRVH--ESKREQSVGVSTEKPLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATGGAAAAACCTACTCATTCGCACAAACAAAGGGGAAACTTCTTCGAGGCAACAAGACGGGTGGAGTGGAGAGCAAAAGAAAGGGGAAGAACATGCTACCAAAGA
GCTGGGAACAAGCCTGGTAAACCTAACAAAGGGTTGGGGTTGTTTCATTTGTGGAGGACCTCAAAGAGCCCGTGACTGCCCAAATAAAGATAAATTGAGTGCATTGATCG
CAGATGACAGACAGGGGGAGAAGTTCCCTTCTTACCCGTATGCTTCACACATTCAGTCTTTCTTCTCCCTTACGTGCCACACCAACCCTCTAAAGCCAAGTGCTTGCTTC
AGTTACAGCCCTGAATTGAATGGGGTGGGAAAGAAAGTATTGGAGGAAGCATGGCATAGAAAGCTGGGTATGTCATGCATGGGTTGTAGGGAAGAGGTAACACGTGTACA
TGAAAGCAAGCGAGAGCAGAGCGTAGGGGTGTCCACGGAGAAACCACTCCAAAGTCATAATGTCTCAAAACGAGGAGGCCATATGGAAACAAGCTGTGAAATTTCCAAGA
GAAAGAAGATTGACCCAATCAAACCGGCGATCAAATCTCTTGACTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATGGAAAAACCTACTCATTCGCACAAACAAAGGGGAAACTTCTTCGAGGCAACAAGACGGGTGGAGTGGAGAGCAAAAGAAAGGGGAAGAACATGCTACCAAAGA
GCTGGGAACAAGCCTGGTAAACCTAACAAAGGGTTGGGGTTGTTTCATTTGTGGAGGACCTCAAAGAGCCCGTGACTGCCCAAATAAAGATAAATTGAGTGCATTGATCG
CAGATGACAGACAGGGGGAGAAGTTCCCTTCTTACCCGTATGCTTCACACATTCAGTCTTTCTTCTCCCTTACGTGCCACACCAACCCTCTAAAGCCAAGTGCTTGCTTC
AGTTACAGCCCTGAATTGAATGGGGTGGGAAAGAAAGTATTGGAGGAAGCATGGCATAGAAAGCTGGGTATGTCATGCATGGGTTGTAGGGAAGAGGTAACACGTGTACA
TGAAAGCAAGCGAGAGCAGAGCGTAGGGGTGTCCACGGAGAAACCACTCCAAAGTCATAATGTCTCAAAACGAGGAGGCCATATGGAAACAAGCTGTGAAATTTCCAAGA
GAAAGAAGATTGACCCAATCAAACCGGCGATCAAATCTCTTGACTCTTGA
Protein sequenceShow/hide protein sequence
MTWKNLLIRTNKGETSSRQQDGWSGEQKKGEEHATKELGTSLVNLTKGWGCFICGGPQRARDCPNKDKLSALIADDRQGEKFPSYPYASHIQSFFSLTCHTNPLKPSACF
SYSPELNGVGKKVLEEAWHRKLGMSCMGCREEVTRVHESKREQSVGVSTEKPLQSHNVSKRGGHMETSCEISKRKKIDPIKPAIKSLDS