; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007278 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007278
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L16, chloroplastic
Genome locationScvUqRz_1244_HRSCAF_2115:133596..133955
RNA-Seq ExpressionLag0007278
SyntenyLag0007278
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000114 - Ribosomal protein L16
IPR016180 - Ribosomal protein L10e/L16
IPR020798 - Ribosomal protein L16, conserved site
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QIT04087.1 ribosomal protein L16 [Luffa aegyptiaca]1.7e-6099.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASK+PIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

QJA16182.1 ribosomal protein L16 [Siraitia grosvenorii]2.8e-6099.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

QKX48512.1 ribosomal protein L16 [Luffa acutangula]5.7e-61100Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

QKX48598.1 ribosomal protein L16 [Luffa aegyptiaca]1.7e-6099.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASK+PIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

YP_009752703.1 ribosomal protein L16 [Ampelosycios humblotii]2.8e-6099.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

TrEMBL top hitse value%identityAlignment
A0A514YKW7 50S ribosomal protein L16, chloroplastic1.4e-6099.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A6C0UEP4 50S ribosomal protein L16, chloroplastic1.4e-6099.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A6H0EQQ6 50S ribosomal protein L16, chloroplastic8.0e-6199.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASK+PIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A7D4XZM2 50S ribosomal protein L16, chloroplastic8.0e-6199.16Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASK+PIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A7D5BX27 50S ribosomal protein L16, chloroplastic2.8e-61100Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

SwissProt top hitse value%identityAlignment
B1NWI7 50S ribosomal protein L16, chloroplastic7.0e-6296.64Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGI+ RGNRICFGRYA+QALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q09ME0 50S ribosomal protein L16, chloroplastic1.7e-6094.96Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q0ZIY1 50S ribosomal protein L16, chloroplastic2.0e-6195.8Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGNRICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q49KW1 50S ribosomal protein L16, chloroplastic4.5e-6194.96Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGNRICFG+YA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q4VZN1 50S ribosomal protein L16, chloroplastic9.1e-6297.48Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        MKGIS RGN ICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GVAENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 122.8e-4271.79Show/hide
Query:  KGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARKA
        KG+SS+G  IC  RYA+Q LEPAWITSRQIEAGRRAMTRN  RG  + V IF DKPVT+RP ETRMG GKG+P +WVAVVKPG+I+YEMGGV+E +AR+A
Subjt:  KGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARKA

Query:  ISIAASKMPIRTQFITS
        ISIAASK+P +T+FI S
Subjt:  ISIAASKMPIRTQFITS

ATCG00790.1 ribosomal protein L168.8e-6091.53Show/hide
Query:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK
        +KGISSRGNRICFGRYA+Q LEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPG+ILYEMGGV ENIARK
Subjt:  MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARK

Query:  AISIAASKMPIRTQFITS
        AISIAASKMPI+TQFI S
Subjt:  AISIAASKMPIRTQFITS

ATMG00080.1 ribosomal protein L164.2e-2243.09Show/hide
Query:  KGISSRGNRICFGRYAIQALEPAWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGV
        +G    G ++ FGRY  ++ +   ++ R IEA R        RAM+   RR GKIWVR+F D P+T +PTE RMG GKG+P  W+A V  G+I +EM GV
Subjt:  KGISSRGNRICFGRYAIQALEPAWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGV

Query:  AENIARKAISIAASKMPIRTQFI
        +   AR+A ++AA K    T+F+
Subjt:  AENIARKAISIAASKMPIRTQFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAATATCTTCTCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGC
AATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCC
CCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCGTCCAAAATGCCT
ATACGAACCCAATTCATTACTTCGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAATATCTTCTCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGC
AATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCC
CCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCGTCCAAAATGCCT
ATACGAACCCAATTCATTACTTCGGGATAG
Protein sequenceShow/hide protein sequence
MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMP
IRTQFITSG