CuGenDBv2

Gene ID	Lag0007281
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	NADH-ubiquinone oxidoreductase chain 2
Genome location	ScvUqRz_1244_HRSCAF_2115:146117..147287
RNA-Seq Expression	Lag0007281
Synteny	Lag0007281
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0008289 - lipid binding (molecular function) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

GAY31810.1 hypothetical protein CUMW_272290 [Citrus unshiu]

7.8e-53

96.23

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQ PNLMRHRVR AGNRSMG RLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RRYLCR
Subjt:  RRYLCR

KAA0060785.1 hypothetical protein E6C27_scaffold43479G00020 [Cucumis melo var. makuwa]

3.1e-49

94.34

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKK  YPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMR RVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RR  CR
Subjt:  RRYLCR

PKI40731.1 hypothetical protein CRG98_038869 [Punica granatum]

1.9e-54

98.11

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVR AGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RRYLCR
Subjt:  RRYLCR

TYK27103.1 hypothetical protein E5676_scaffold77438G00010 [Cucumis melo var. makuwa]

3.1e-49

94.34

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKK  YPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMR RVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RR  CR
Subjt:  RRYLCR

YP_004222261.1 hypothetical protein BevumaM_p022 [Beta vulgaris subsp. maritima]

1.6e-53

97.17

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVR AGNRSMGGRLILLP QGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RRYLCR
Subjt:  RRYLCR

TrEMBL top hits

e value

%identity

Alignment

A0A2H5MUX0 Uncharacterized protein

3.8e-53

96.23

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQ PNLMRHRVR AGNRSMG RLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RRYLCR
Subjt:  RRYLCR

A0A2I0I9S4 Uncharacterized protein

9.0e-55

98.11

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVR AGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RRYLCR
Subjt:  RRYLCR

A0A5A7V4H7 Uncharacterized protein

1.5e-49

94.34

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKK  YPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMR RVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RR  CR
Subjt:  RRYLCR

E6ZDX1 Uncharacterized protein orf134c

7.6e-54

97.17

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVR AGNRSMGGRLILLP QGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RRYLCR
Subjt:  RRYLCR

G2XLP0 Uncharacterized protein

7.6e-54

97.17

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Query:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL
        +TSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVR AGNRSMGGRLILLP QGWLIVRSRLEDPWFWKAHESERYVECATDTTL
Subjt:  TTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAAGNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTL

Query:  RRYLCR
        RRYLCR
Subjt:  RRYLCR

SwissProt top hits

e value

%identity

Alignment

O05000 NADH-ubiquinone oxidoreductase chain 2

3.7e-05

91.3

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Query:  TTSKKYDYPPLVSNVGWLGLLSV
        +TSKKYDYPPL SNVGWLGLLSV
Subjt:  TTSKKYDYPPLVSNVGWLGLLSV

P26846 NADH-ubiquinone oxidoreductase chain 2

4.8e-05

91.3

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Query:  TTSKKYDYPPLVSNVGWLGLLSV
        +TSKKYDYPPLV NVGWLGLLSV
Subjt:  TTSKKYDYPPLVSNVGWLGLLSV

P93401 NADH-ubiquinone oxidoreductase chain 2

1.8e-04

91.3

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Query:  TTSKKYDYPPLVSNVGWLGLLSV
        +TSKK DYPPLVSNVGWLGLLSV
Subjt:  TTSKKYDYPPLVSNVGWLGLLSV

Arabidopsis top hits

e value

%identity

Alignment

ATMG00285.1 NADH dehydrogenase 2A

2.6e-06

91.3

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Query:  TTSKKYDYPPLVSNVGWLGLLSV
        +TSKKYDYPPL SNVGWLGLLSV
Subjt:  TTSKKYDYPPLVSNVGWLGLLSV

ATMG01320.1 NADH dehydrogenase 2B

2.6e-06

91.3

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Query:  TTSKKYDYPPLVSNVGWLGLLSV
        +TSKKYDYPPL SNVGWLGLLSV
Subjt:  TTSKKYDYPPLVSNVGWLGLLSV

Sequences

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CDS sequence

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ATGGGTTTGATTTGCTTCACCTATGAGAATTTCTACAGATTCTTCTTTTATTCATCAAAGCTCATCCTAATCTCCGTCGAGATTACTGCCTTAGCCCTGTCCTATCATCT
GTATAATGGGCGATCCCTCCTAGCCGCCGTCGTCAGTGCAGCCTGCCTGTTGAAGACCGTAACTACCTCTAAGAAATATGATTATCCACCGTTAGTCAGTAATGTGGGTT
GGCTTGGATTACTTAGTGTTGCGCGCCTAGGAGGGCAGCGCGCTTTGGGATGCGGAGGAGCTATTATCGCCCAACTCCCTAACCTAATGCGGCACCGGGTTCGGGCCGCG
GGGAACCGTAGCATGGGGGGACGTCTAATCCTTTTGCCGCCGCAAGGCTGGCTAATCGTACGCAGCAGGCTCGAAGACCCCTGGTTCTGGAAGGCACATGAGTCCGAACG
CTATGTTGAATGTGCGACCGACACTACACTACGTAGGTACCTGTGCAGGTGA

mRNA sequence

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Protein sequence

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MGLICFTYENFYRFFFYSSKLILISVEITALALSYHLYNGRSLLAAVVSAACLLKTVTTSKKYDYPPLVSNVGWLGLLSVARLGGQRALGCGGAIIAQLPNLMRHRVRAA
GNRSMGGRLILLPPQGWLIVRSRLEDPWFWKAHESERYVECATDTTLRRYLCR

Lag0007281 (gene) of Sponge gourd (AG-4) v1 genome