; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007291 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007291
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationScvUqRz_1244_HRSCAF_2115:171462..172834
RNA-Seq ExpressionLag0007291
SyntenyLag0007291
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1835933.1 unnamed protein product [Ananas comosus var. bracteatus]6.5e-0590Show/hide
Query:  LRSGFEPLTQGFSVLCSNQLSYLNHFPKGF
        LRSGFEPLTQGFSVLCSN LSYLNHFP  F
Subjt:  LRSGFEPLTQGFSVLCSNQLSYLNHFPKGF
GER39013.1 Orf110b protein [Striga asiatica]5.7e-0982Show/hide
Query:  SFICISKSGSLPATC--PLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
        SF  ISKSGSL AT    L P LRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  SFICISKSGSLPATC--PLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
KJB09734.1 hypothetical protein B456_001G161000, partial [Gossypium raimondii]3.5e-06100Show/hide
Query:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
        LRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
NP_064104.1 orf110b gene product [Beta vulgaris subsp. vulgaris]3.5e-06100Show/hide
Query:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
        LRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
YP_173477.1 hypothetical protein NitaMp140 [Nicotiana tabacum]1.2e-1184Show/hide
Query:  ASSFICISKSGSLPATCPLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
        A SF  ISKSGSLPAT     LLRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  ASSFICISKSGSLPATCPLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
TrEMBL top hitse value%identityAlignment
A0A4D8YGR2 Ribulose bisphosphate carboxylase large chain1.2e-0941.53Show/hide
Query:  RSGFEPLTQGFSVLCSNQLSYLNHFPKGFIFSLVRQAFELLFQFNCRLISQHAQKPRAAQGLDNRRELASRKRIGRSNKNKAQRALPPLLVTKLCYSVLG
        + G +   + +S  CS+ L  L   PK         + +L   FNCRLI QHAQ+PRA QGLD RRELA RK+IGRS KNKAQ      L+  L  S + 
Subjt:  RSGFEPLTQGFSVLCSNQLSYLNHFPKGFIFSLVRQAFELLFQFNCRLISQHAQKPRAAQGLDNRRELASRKRIGRSNKNKAQRALPPLLVTKLCYSVLG

Query:  GTPPRGSFSHVISPVPLP
        GT      ++ +S   +P
Subjt:  GTPPRGSFSHVISPVPLP
A0A5A7Q1I4 Orf110b protein2.8e-0982Show/hide
Query:  SFICISKSGSLPATC--PLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
        SF  ISKSGSL AT    L P LRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  SFICISKSGSLPATC--PLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
E6ZE61 Uncharacterized protein orf110b1.7e-06100Show/hide
Query:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
        LRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
G2XLW7 Uncharacterized protein1.7e-06100Show/hide
Query:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
        LRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  LRSGFEPLTQGFSVLCSNQLSYLNHFPK
Q5M9T5 Uncharacterized protein6.0e-1284Show/hide
Query:  ASSFICISKSGSLPATCPLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
        A SF  ISKSGSLPAT     LLRSGFEPLTQGFSVLCSNQLSYLNHFPK
Subjt:  ASSFICISKSGSLPATCPLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTCTCATTCGACATTCTCTCTTACCAAGCTCTCGTACTCGCCAGGGTTGAGGAGGCAGTCCGTGCCGTTCAGGAAAGGGTCTTATCTCTTTCATTGGAGCACAT
TGATGCCGAAGGAGTCTTCGGAACCGGTGGAGAGGCTATGATGATTGAAGGCTATTCAAATAGCATGACTGATACCACAAAGAATGGTGTGCGCGGTTCGCCTGCCTTCC
TGACCACGGATAGGCTACGGGGCTTTGCACTTCGGCCCCTGAGAATACCACATCAAGGGACGCGAGAACCAATCCGAGTAATCCACCGCTTTTTTTTTGAATCTACCTCC
TGCAATCTCGGGCGACGCCAAAAAGCCGTCTCGTGCAGGAGCGAAGCCGATAGGGAGAGGGGAAGGAGCAAAGCCACTTTACCGAGTTTACGAGGTGAAGGAGCGCTCAC
ATTTTGTTTTGCTTCCTCTTTCATTTGCATTTCCAAATCCGGCTCGCTCCCGGCTACGTGTCCTTTGGACCCTTTGCTTAGAAGTGGATTCGAACCACTGACACAAGGAT
TTTCAGTCCTTTGCTCTAACCAGCTGAGCTACCTGAACCACTTTCCTAAAGGCTTTATTTTTTCGCTTGTTCGTCAAGCTTTCGAGCTGCTCTTTCAATTCAACTGCCGC
CTAATCTCCCAACATGCTCAAAAACCGAGAGCCGCCCAGGGACTGGACAACCGGAGGGAGCTTGCTTCTCGAAAGAGGATAGGCCGGTCAAACAAAAACAAGGCGCAACG
GGCTCTCCCTCCGCTCCTAGTCACTAAGTTGTGCTATTCTGTCCTCGGGGGGACTCCACCAAGAGGTTCTTTCTCTCACGTAATTTCGCCCGTTCCACTTCCGTGCCGGA
GGAAATGGGATGAGAACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTCTCATTCGACATTCTCTCTTACCAAGCTCTCGTACTCGCCAGGGTTGAGGAGGCAGTCCGTGCCGTTCAGGAAAGGGTCTTATCTCTTTCATTGGAGCACAT
TGATGCCGAAGGAGTCTTCGGAACCGGTGGAGAGGCTATGATGATTGAAGGCTATTCAAATAGCATGACTGATACCACAAAGAATGGTGTGCGCGGTTCGCCTGCCTTCC
TGACCACGGATAGGCTACGGGGCTTTGCACTTCGGCCCCTGAGAATACCACATCAAGGGACGCGAGAACCAATCCGAGTAATCCACCGCTTTTTTTTTGAATCTACCTCC
TGCAATCTCGGGCGACGCCAAAAAGCCGTCTCGTGCAGGAGCGAAGCCGATAGGGAGAGGGGAAGGAGCAAAGCCACTTTACCGAGTTTACGAGGTGAAGGAGCGCTCAC
ATTTTGTTTTGCTTCCTCTTTCATTTGCATTTCCAAATCCGGCTCGCTCCCGGCTACGTGTCCTTTGGACCCTTTGCTTAGAAGTGGATTCGAACCACTGACACAAGGAT
TTTCAGTCCTTTGCTCTAACCAGCTGAGCTACCTGAACCACTTTCCTAAAGGCTTTATTTTTTCGCTTGTTCGTCAAGCTTTCGAGCTGCTCTTTCAATTCAACTGCCGC
CTAATCTCCCAACATGCTCAAAAACCGAGAGCCGCCCAGGGACTGGACAACCGGAGGGAGCTTGCTTCTCGAAAGAGGATAGGCCGGTCAAACAAAAACAAGGCGCAACG
GGCTCTCCCTCCGCTCCTAGTCACTAAGTTGTGCTATTCTGTCCTCGGGGGGACTCCACCAAGAGGTTCTTTCTCTCACGTAATTTCGCCCGTTCCACTTCCGTGCCGGA
GGAAATGGGATGAGAACCCATGA
Protein sequenceShow/hide protein sequence
MYFSFDILSYQALVLARVEEAVRAVQERVLSLSLEHIDAEGVFGTGGEAMMIEGYSNSMTDTTKNGVRGSPAFLTTDRLRGFALRPLRIPHQGTREPIRVIHRFFFESTS
CNLGRRQKAVSCRSEADRERGRSKATLPSLRGEGALTFCFASSFICISKSGSLPATCPLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPKGFIFSLVRQAFELLFQFNCR
LISQHAQKPRAAQGLDNRRELASRKRIGRSNKNKAQRALPPLLVTKLCYSVLGGTPPRGSFSHVISPVPLPCRRKWDENP