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Lag0007312 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007312
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING/U-box superfamily protein
Genome locationScvUqRz_1250_HRSCAF_2122:79955..80394
RNA-Seq ExpressionLag0007312
SyntenyLag0007312
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28590.1 hypothetical protein Acr_00g0002670 [Actinidia rufa]5.1e-0445.05Show/hide
Query:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP
        KV+LFRRG       P  VR S  +  E        SGLNSG   PSAAR GNGARRG  YAP LCC             RP  Y  E  P
Subjt:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP

GFY85168.1 RING/U-box superfamily protein [Actinidia rufa]5.1e-0445.05Show/hide
Query:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP
        KV+LFRRG       P  VR S  +  E        SGLNSG   PSAAR GNGARRG  YAP LCC             RP  Y  E  P
Subjt:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP

KAE8663210.1 Detected protein of unknown function [Hibiscus syriacus]1.2e-0558.82Show/hide
Query:  MTSGRYKVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYA
        MTSGRY+V+LF RG       P  +R SS    E        SGLNSGPA PSAAR GNGARRGRRYA
Subjt:  MTSGRYKVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYA

KYP33254.1 hypothetical protein KK1_045899 [Cajanus cajan]3.5e-0589.66Show/hide
Query:  LHLIPTAGIDLMRPAHYYDEKSPALFLRY
        LHLIPTAGIDLMRPAHYY EKSPA  LRY
Subjt:  LHLIPTAGIDLMRPAHYYDEKSPALFLRY

TYI32627.1 hypothetical protein ES332_A04G077300v1 [Gossypium tomentosum]6.0e-0560Show/hide
Query:  SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP
        SGLNSG A PSAARS NGARRGRRYAP LCCD            RP  Y  E  P
Subjt:  SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP

TrEMBL top hitse value%identityAlignment
A0A151QSM8 Uncharacterized protein1.7e-0589.66Show/hide
Query:  LHLIPTAGIDLMRPAHYYDEKSPALFLRY
        LHLIPTAGIDLMRPAHYY EKSPA  LRY
Subjt:  LHLIPTAGIDLMRPAHYYDEKSPALFLRY

A0A5D2QVI1 Uncharacterized protein2.9e-0560Show/hide
Query:  SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP
        SGLNSG A PSAARS NGARRGRRYAP LCCD            RP  Y  E  P
Subjt:  SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP

A0A6A2X3H8 Uncharacterized protein5.9e-0658.82Show/hide
Query:  MTSGRYKVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYA
        MTSGRY+V+LF RG       P  +R SS    E        SGLNSGPA PSAAR GNGARRGRRYA
Subjt:  MTSGRYKVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYA

A0A7J0D7M3 Uncharacterized protein2.5e-0445.05Show/hide
Query:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP
        KV+LFRRG       P  VR S  +  E        SGLNSG   PSAAR GNGARRG  YAP LCC             RP  Y  E  P
Subjt:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP

A0A7J0EFA7 RING/U-box superfamily protein2.5e-0445.05Show/hide
Query:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP
        KV+LFRRG       P  VR S  +  E        SGLNSG   PSAAR GNGARRG  YAP LCC             RP  Y  E  P
Subjt:  KVNLFRRGRQDNRDLPVCVRGSSSNKEE--------SGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCCGGGCGGTACAAAGTCAACCTCTTCCGTAGAGGCAGGCAGGACAACAGAGATCTTCCGGTCTGCGTGCGTGGGAGCAGCTCAAACAAAGAAGAGTCTGGTCT
GAATTCAGGCCCGGCCTGCCCGTCTGCTGCTAGGTCCGGGAATGGCGCCAGGCGAGGGCGCCGCTATGCCCCGCAGCTCTGCTGCGACCTTCATTTGATTCCGACGGCCG
GCATAGATCTCATGAGACCCGCCCACTATTACGACGAAAAAAGCCCTGCCCTTTTCCTTCGCTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTCCGGGCGGTACAAAGTCAACCTCTTCCGTAGAGGCAGGCAGGACAACAGAGATCTTCCGGTCTGCGTGCGTGGGAGCAGCTCAAACAAAGAAGAGTCTGGTCT
GAATTCAGGCCCGGCCTGCCCGTCTGCTGCTAGGTCCGGGAATGGCGCCAGGCGAGGGCGCCGCTATGCCCCGCAGCTCTGCTGCGACCTTCATTTGATTCCGACGGCCG
GCATAGATCTCATGAGACCCGCCCACTATTACGACGAAAAAAGCCCTGCCCTTTTCCTTCGCTACTAG
Protein sequenceShow/hide protein sequence
MTSGRYKVNLFRRGRQDNRDLPVCVRGSSSNKEESGLNSGPACPSAARSGNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAHYYDEKSPALFLRY