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Lag0007313 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007313
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionATP synthase subunit c, chloroplastic
Genome locationScvUqRz_1250_HRSCAF_2122:80564..81362
RNA-Seq ExpressionLag0007313
SyntenyLag0007313
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF27698.1 conserved hypothetical protein [Ricinus communis]2.1e-4657.47Show/hide
Query:  FTPHSLLNKARPRAF-NSQGRVGRVFPCC--SVPATRKTHRRV-------VLAFNKAERGQFLVLAQCAPLSSSAPPGSLG-CWPTKHLPAAPAARLAGS
        FTPHSLLNKARPRA   S G    +  C      A ++  +R        V++++ A    F  L    P      P     CWPTKHLPA  AARL G 
Subjt:  FTPHSLLNKARPRAF-NSQGRVGRVFPCC--SVPATRKTHRRV-------VLAFNKAERGQFLVLAQCAPLSSSAPPGSLG-CWPTKHLPAAPAARLAGS

Query:  ALVILTVLSAGAPHGSSHKLWQLQLATTGAQRS----------------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL---DP
        ALVILTVLSAGAP+ SSHKLWQLQLATTGA+ +                      DLERYYESSVPDSIAAAIWFTGTTKKSHAYVTV DGLIIL   DP
Subjt:  ALVILTVLSAGAPHGSSHKLWQLQLATTGAQRS----------------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL---DP

Query:  GRASGFHSHHHIDDKSPRAPP
        GRASGFHS HHIDDKSPRA P
Subjt:  GRASGFHSHHHIDDKSPRAPP

GFS28590.1 hypothetical protein Acr_00g0002670 [Actinidia rufa]3.1e-4572.97Show/hide
Query:  SAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTG--------AQRS--------------DLERYYESSVPDSIAAAI
        SA  GSLGCWPTKHLPAAPAARLAG ALVILT  SAGAP H SSHKLWQLQLATTG        AQRS              DLERYY+SSVPDSIAAAI
Subjt:  SAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTG--------AQRS--------------DLERYYESSVPDSIAAAI

Query:  WFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP
        WFTGTTKKSHAYVT+ DG IIL   DP RAS FHSHHHID+KSPRA P
Subjt:  WFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP

KAF4349936.1 hypothetical protein G4B88_002358 [Cannabis sativa]1.2e-5782.78Show/hide
Query:  NKAERGQFLVLAQCAPLSSSAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTGAQRS------DLERYYESSVPDSIA
        NKA+RGQFLVLAQCA LSSSAPPGSLGCWPTK+LPAAPAAR AGSALVILTVLS G P H SSHKLW LQLATTGA+ +        ERYYESSVPDSIA
Subjt:  NKAERGQFLVLAQCAPLSSSAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTGAQRS------DLERYYESSVPDSIA

Query:  AAIWFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP
        AAIWFTGTTKKSHAYVTVIDG IIL   DPGRASGFHSHHHID+KSPRA P
Subjt:  AAIWFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP

KDP46047.1 hypothetical protein JCGZ_13493 [Jatropha curcas]1.9e-3468.99Show/hide
Query:  KHLPAAPAARLAGSALVILTVLSAGAPHGSSHKLWQLQLATTG-------AQRS--------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVT
        +H PAA AA L G ALVILT+LSA  P+ SSHKLWQ+Q  T G       AQRS              DLERYYESSVPDSIAAAIWFTGTTKKSHAYVT
Subjt:  KHLPAAPAARLAGSALVILTVLSAGAPHGSSHKLWQLQLATTG-------AQRS--------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVT

Query:  VIDGLIIL---DPGRASGFHSHHHIDDKS
        V DGLIIL   DPGRASGFHSHHHIDDKS
Subjt:  VIDGLIIL---DPGRASGFHSHHHIDDKS

PHT80124.1 ATP synthase subunit c, chloroplastic [Capsicum annuum]6.2e-3063.57Show/hide
Query:  PLSSSAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAPHGSSHKLWQLQLATTGAQRSDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGL
        PLSSSAPP SLGCW TKHLPAAPAA L G+      V    A   +S ++    L+       DLERYY+SS+ D I AAIWFT TTKKSHAYVTVIDGL
Subjt:  PLSSSAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAPHGSSHKLWQLQLATTGAQRSDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGL

Query:  IILD---PGRASGFHSHHHIDDKSPRAPP
        IILD   P RASGFHS++HIDDKSPRA P
Subjt:  IILD---PGRASGFHSHHHIDDKSPRAPP

TrEMBL top hitse value%identityAlignment
A0A067LCB0 Uncharacterized protein9.1e-3568.99Show/hide
Query:  KHLPAAPAARLAGSALVILTVLSAGAPHGSSHKLWQLQLATTG-------AQRS--------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVT
        +H PAA AA L G ALVILT+LSA  P+ SSHKLWQ+Q  T G       AQRS              DLERYYESSVPDSIAAAIWFTGTTKKSHAYVT
Subjt:  KHLPAAPAARLAGSALVILTVLSAGAPHGSSHKLWQLQLATTG-------AQRS--------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVT

Query:  VIDGLIIL---DPGRASGFHSHHHIDDKS
        V DGLIIL   DPGRASGFHSHHHIDDKS
Subjt:  VIDGLIIL---DPGRASGFHSHHHIDDKS

A0A6N2KI27 Uncharacterized protein1.3e-3669.06Show/hide
Query:  LSSSAPPGSLGCWPTKHLPAAPAARLA-----------GSALVILTVLSAGAPHGSSHKLWQLQLATTGAQRSDLERYYESSVPDSIAAAIWFTGTTKKS
        LSSSAPPGSLGCWPTKHLPAA AARL            G       V SA +PH  S+ +  L L        DLERYYESSVPDSIAAAIWFTGTTKKS
Subjt:  LSSSAPPGSLGCWPTKHLPAAPAARLA-----------GSALVILTVLSAGAPHGSSHKLWQLQLATTGAQRSDLERYYESSVPDSIAAAIWFTGTTKKS

Query:  HAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP
        HAYVTVIDGLIIL   DPGRASGFHSHHHID KSPRAPP
Subjt:  HAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP

A0A7J0D7M3 Uncharacterized protein1.5e-4572.97Show/hide
Query:  SAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTG--------AQRS--------------DLERYYESSVPDSIAAAI
        SA  GSLGCWPTKHLPAAPAARLAG ALVILT  SAGAP H SSHKLWQLQLATTG        AQRS              DLERYY+SSVPDSIAAAI
Subjt:  SAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTG--------AQRS--------------DLERYYESSVPDSIAAAI

Query:  WFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP
        WFTGTTKKSHAYVT+ DG IIL   DP RAS FHSHHHID+KSPRA P
Subjt:  WFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP

A0A7J6DV88 Uncharacterized protein5.8e-5882.78Show/hide
Query:  NKAERGQFLVLAQCAPLSSSAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTGAQRS------DLERYYESSVPDSIA
        NKA+RGQFLVLAQCA LSSSAPPGSLGCWPTK+LPAAPAAR AGSALVILTVLS G P H SSHKLW LQLATTGA+ +        ERYYESSVPDSIA
Subjt:  NKAERGQFLVLAQCAPLSSSAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAP-HGSSHKLWQLQLATTGAQRS------DLERYYESSVPDSIA

Query:  AAIWFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP
        AAIWFTGTTKKSHAYVTVIDG IIL   DPGRASGFHSHHHID+KSPRA P
Subjt:  AAIWFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP

B9T8W5 Uncharacterized protein1.0e-4657.47Show/hide
Query:  FTPHSLLNKARPRAF-NSQGRVGRVFPCC--SVPATRKTHRRV-------VLAFNKAERGQFLVLAQCAPLSSSAPPGSLG-CWPTKHLPAAPAARLAGS
        FTPHSLLNKARPRA   S G    +  C      A ++  +R        V++++ A    F  L    P      P     CWPTKHLPA  AARL G 
Subjt:  FTPHSLLNKARPRAF-NSQGRVGRVFPCC--SVPATRKTHRRV-------VLAFNKAERGQFLVLAQCAPLSSSAPPGSLG-CWPTKHLPAAPAARLAGS

Query:  ALVILTVLSAGAPHGSSHKLWQLQLATTGAQRS----------------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL---DP
        ALVILTVLSAGAP+ SSHKLWQLQLATTGA+ +                      DLERYYESSVPDSIAAAIWFTGTTKKSHAYVTV DGLIIL   DP
Subjt:  ALVILTVLSAGAPHGSSHKLWQLQLATTGAQRS----------------------DLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL---DP

Query:  GRASGFHSHHHIDDKSPRAPP
        GRASGFHS HHIDDKSPRA P
Subjt:  GRASGFHSHHHIDDKSPRAPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTCACTCCCCATTCTCTCTTAAATAAAGCTCGCCCTCGAGCTTTTAATAGTCAGGGGCGGGTCGGCCGGGTCTTTCCCTGTTGTTCTGTTCCCGCCACGAGAAA
GACGCACAGAAGAGTGGTCCTTGCTTTTAATAAAGCGGAGCGGGGCCAATTTCTCGTACTTGCTCAGTGTGCCCCCCTTTCGTCGAGTGCCCCGCCCGGTTCACTGGGCT
GTTGGCCTACCAAGCACTTGCCCGCAGCTCCTGCCGCCCGCTTGGCGGGCTCCGCGCTCGTTATCCTTACAGTTCTCTCTGCTGGGGCCCCCCATGGCTCTAGCCATAAG
CTATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTAC
TACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTGATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCTCCTC
GTGCTCCGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTCACTCCCCATTCTCTCTTAAATAAAGCTCGCCCTCGAGCTTTTAATAGTCAGGGGCGGGTCGGCCGGGTCTTTCCCTGTTGTTCTGTTCCCGCCACGAGAAA
GACGCACAGAAGAGTGGTCCTTGCTTTTAATAAAGCGGAGCGGGGCCAATTTCTCGTACTTGCTCAGTGTGCCCCCCTTTCGTCGAGTGCCCCGCCCGGTTCACTGGGCT
GTTGGCCTACCAAGCACTTGCCCGCAGCTCCTGCCGCCCGCTTGGCGGGCTCCGCGCTCGTTATCCTTACAGTTCTCTCTGCTGGGGCCCCCCATGGCTCTAGCCATAAG
CTATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTAC
TACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTGATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCTCCTC
GTGCTCCGCCATAA
Protein sequenceShow/hide protein sequence
MRFTPHSLLNKARPRAFNSQGRVGRVFPCCSVPATRKTHRRVVLAFNKAERGQFLVLAQCAPLSSSAPPGSLGCWPTKHLPAAPAARLAGSALVILTVLSAGAPHGSSHK
LWQLQLATTGAQRSDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIILDPGRASGFHSHHHIDDKSPRAPP