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Lag0007497 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007497
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:111875..112512
RNA-Seq ExpressionLag0007497
SyntenyLag0007497
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2411254.1 hypothetical protein I3760_Q017000 [Carya illinoinensis]1.2e-4656.6Show/hide
Query:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF
        MSDSLVRVSRR EWGAHRP PGARRCRSTP GA C PRS +RRLH  +   G GRR NPHRS P+VDR+TG HRSTSD G SPAPIRFPPDNFKH LTLF
Subjt:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF

Query:  SKSFSSFPRGS----------ERNGALTLSGAPF-------------QGTCARSAAEDASPDYNS----------------DAEGARFSSWALPGSLAVT
        SKSFSSFPRG+            +G     GA F             QG      +   +P                       G RFSSWALPGSL VT
Subjt:  SKSFSSFPRGS----------ERNGALTLSGAPF-------------QGTCARSAAEDASPDYNS----------------DAEGARFSSWALPGSLAVT

Query:  RGILVSFFSSAY
        R ILVSFFSSAY
Subjt:  RGILVSFFSSAY

XP_022933354.1 uncharacterized protein LOC111440692 [Cucurbita moschata]1.3e-5864.15Show/hide
Query:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF
        MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGA CQPRSGRRRLH+RNKGLGFGRRLNPHRSMPQVD RTG        G    P   P   F+      
Subjt:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF

Query:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT
         K    FP                                        GSERNGALTLSGAPFQGTCARS AEDASPDYNS+AEGARFSSWALPGSLAVT
Subjt:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT

Query:  RGILVSFFSSAY
        +GILVSFFSSAY
Subjt:  RGILVSFFSSAY

XP_022975713.1 uncharacterized protein LOC111475769 [Cucurbita maxima]1.7e-5864.15Show/hide
Query:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF
        MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGA CQPRSGRRRLH+RNKGLGFGRRLNPHRSMPQVD RTG        G    P   P   F+      
Subjt:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF

Query:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT
         K    FP                                        GSERNGALTLSGAPFQGTCARS AEDASPDYNS+AEGARFSSWALPGSLAVT
Subjt:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT

Query:  RGILVSFFSSAY
        +GILVSFFSSAY
Subjt:  RGILVSFFSSAY

XP_023520622.1 uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo]9.8e-4663.73Show/hide
Query:  MPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSH----RSTSDWGTSPAPIR-FPP--DNFKHYLTLF----------SK
        MPGARRCRSTP+GA CQPRSGRRRLH+RNKGLGFGRRLNPHRSMPQVD RTG      R     G  P P R F    D+    L +F          S 
Subjt:  MPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSH----RSTSDWGTSPAPIR-FPP--DNFKHYLTLF----------SK

Query:  SFS-------------------SFPR---GSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRGILVSFFSSAY
         FS                   + PR   GSERNGALTLSGAPFQGTCARS AEDASPDYNS+AEGARFSSWALPGSLAVT+GILVSFFSSAY
Subjt:  SFS-------------------SFPR---GSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRGILVSFFSSAY

XP_023552350.1 uncharacterized protein LOC111810043 [Cucurbita pepo subsp. pepo]1.9e-5766.98Show/hide
Query:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSH----RSTSDWGTSPAPIR-FPP--DNF
        MSDSLVRVSRRVEWGAHRPMPGARRCRSTP+GA CQPRSGRRRLH+RNKGLGFGRRLNPHRSMPQVD RTG      R     G  P P R F    D+ 
Subjt:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSH----RSTSDWGTSPAPIR-FPP--DNF

Query:  KHYLTLF----------SKSFS-------------------SFPR---GSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT
           L +F          S  FS                   + PR   GSERNGALTLSGAPFQGTCARS AEDASPDYNS+AEGARFSSWALPGSLAVT
Subjt:  KHYLTLF----------SKSFS-------------------SFPR---GSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT

Query:  RGILVSFFSSAY
        +GILVSFFSSAY
Subjt:  RGILVSFFSSAY

TrEMBL top hitse value%identityAlignment
A0A4S8I781 Uncharacterized protein4.4e-4461.96Show/hide
Query:  MSDSLVRVSRRVEWGAHRPMP-----------GARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFP
        MSDSLVRVSRRV WGAH PMP           GAR      +G     RS R      +       R++PH   P+        RS SD G SP PIRFP
Subjt:  MSDSLVRVSRRVEWGAHRPMP-----------GARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFP

Query:  PDNFKHYLTLFSKSFSSFPRGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRGILVSFFSSAY
        P NFKH LTLFSKSFSSFPRGSE +GALTL GAPFQGT ARS AEDASPDYNSD   ARFSSWA PGSLAVT+GILVSFFSSAY
Subjt:  PDNFKHYLTLFSKSFSSFPRGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRGILVSFFSSAY

A0A6J1EZI8 uncharacterized protein LOC1114406926.4e-5964.15Show/hide
Query:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF
        MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGA CQPRSGRRRLH+RNKGLGFGRRLNPHRSMPQVD RTG        G    P   P   F+      
Subjt:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF

Query:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT
         K    FP                                        GSERNGALTLSGAPFQGTCARS AEDASPDYNS+AEGARFSSWALPGSLAVT
Subjt:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT

Query:  RGILVSFFSSAY
        +GILVSFFSSAY
Subjt:  RGILVSFFSSAY

A0A6J1IK28 uncharacterized protein LOC1114757698.3e-5964.15Show/hide
Query:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF
        MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGA CQPRSGRRRLH+RNKGLGFGRRLNPHRSMPQVD RTG        G    P   P   F+      
Subjt:  MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLF

Query:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT
         K    FP                                        GSERNGALTLSGAPFQGTCARS AEDASPDYNS+AEGARFSSWALPGSLAVT
Subjt:  SKSFSSFP---------------------------------------RGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVT

Query:  RGILVSFFSSAY
        +GILVSFFSSAY
Subjt:  RGILVSFFSSAY

A0A6N2KEE6 Uncharacterized protein1.1e-5076.35Show/hide
Query:  RPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRGSERNGAL
        R   GARR     +GARC PRS RR LHRR KG G GR  +PHRS P+ DRRTG  RSTSD G SPAPI FPPDNFKH LTLFSKSFSSFPRGS  +GAL
Subjt:  RPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRGSERNGAL

Query:  TLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRGIL
        TLSGAPFQGT A SAAEDASPDYNS+A GARFSSWA PGSLAVTRGIL
Subjt:  TLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRGIL

A0A6N2KNB2 Uncharacterized protein4.1e-5864.36Show/hide
Query:  SDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLFS
        ++SLVRVSRR EWGAHRPMPGAR CR+  +GARC PRS RR LHRR KG G GR  +PHRS P+ DRRTG  RSTSD G SPAPI FPPDNFKH LTLFS
Subjt:  SDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLFS

Query:  KSFSSFPR--------------------------------------GSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRG
        KSFSSFPR                                      GS  +GALTLSGAPFQGT A SAAEDASPDYNS+A GARFSSWA PGSLAVTRG
Subjt:  KSFSSFPR--------------------------------------GSERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRG

Query:  IL
        IL
Subjt:  IL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCACGCCCGAGGGCGCGCGCTGCCAGCC
ACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCTCACC
GTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGG
TCCGAGCGCAACGGGGCTCTCACCCTCTCCGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGCCGAGGGCGC
CCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCACGCCCGAGGGCGCGCGCTGCCAGCC
ACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCTCACC
GTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGG
TCCGAGCGCAACGGGGCTCTCACCCTCTCCGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGCCGAGGGCGC
CCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGA
Protein sequenceShow/hide protein sequence
MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGARCQPRSGRRRLHRRNKGLGFGRRLNPHRSMPQVDRRTGSHRSTSDWGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRG
SERNGALTLSGAPFQGTCARSAAEDASPDYNSDAEGARFSSWALPGSLAVTRGILVSFFSSAY