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Lag0007512 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007512
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:370082..370798
RNA-Seq ExpressionLag0007512
SyntenyLag0007512
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.7e-2734.54Show/hide
Query:  SILCKIYTGKNIIVN--VGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQV
        S +  I+  KN +    +G N+F  +F+N   + RILE GPW ++K LL+  E  G      + F++V FWI  H LP AC  R     +G L+ +V+++
Subjt:  SILCKIYTGKNIIVN--VGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQV

Query:  DIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKEC--DTYSGTIEEELLYGPWLRELVKFKS
        D   E+       +RI++ IDV   LKRG+ +          + I YE+LPNFCY CG +GH +++C  +T   T      +GPW+R + + +S
Subjt:  DIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKEC--DTYSGTIEEELLYGPWLRELVKFKS

XP_015381031.1 uncharacterized protein LOC107174550 [Citrus sinensis]2.2e-2737.35Show/hide
Query:  VFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRID
        +F+ KF +A  K R+L+ GPW ++++ ++ +EP G        F  VSFW+  H +P  C   S+  EI S +   E V   D T   +   +R++I ID
Subjt:  VFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRID

Query:  VHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSGTIEEELLYGPWLREL
        + + LK+ I ++    G E  + +TYEKLP+FC+ CG++ H  +EC TY G  +EEL YG WLR +
Subjt:  VHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSGTIEEELLYGPWLREL

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.6e-3032.76Show/hide
Query:  KVTEEERASVFQLREGKITRSESQLVNSILCKIYTGKNIIVNV---------------------GFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEP
        K+T EE      +    +  +   L  S++CK+ + ++I   V                     GFN+FL  F  +  + RIL +GPW ++++L++ + P
Subjt:  KVTEEERASVFQLREGKITRSESQLVNSILCKIYTGKNIIVNV---------------------GFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEP

Query:  KGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFC
                MDF+ VS W+HF  L  AC  ++ AT +G+ +   E V+     +  W S LR+++R DV + L RGI +   G  G  WI I YE+LP+F 
Subjt:  KGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFC

Query:  YGCGHLGHTIKEC-DTYSGTIEEELLYGPWLR
        Y CG L H +K+C D    ++ + L YGPWLR
Subjt:  YGCGHLGHTIKEC-DTYSGTIEEELLYGPWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.2e-2733Show/hide
Query:  RSESQLVNSILCKIYTGKNI--IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGS
        R  ++ + S++  ++   N      +G N+++  F++   K R+L  GPW + KSLL+   P        M+F F +FWI  H +P+ C     A  +G+
Subjt:  RSESQLVNSILCKIYTGKNI--IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGS

Query:  LLREVEQVDIKDETYPKWSSS-LRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSG--TIEEELLYGPWLRELVK
         L +VE  +I+ +    W+   +R++++IDV + L+RGI +K+   G + W  + YEKLP+FCY CG +GH+ +EC+  S   T      YG WLR  + 
Subjt:  LLREVEQVDIKDETYPKWSSS-LRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSG--TIEEELLYGPWLRELVK

Query:  FKS
         KS
Subjt:  FKS

XP_024042073.1 uncharacterized protein LOC112099188 [Citrus clementina]2.0e-2834.48Show/hide
Query:  IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSL
        I ++G N+F+ KF     K R+L  GPW ++++L++  +PKG       DF  + FW+  H +P AC  R    E+G ++R+VE+V+  DE    +    
Subjt:  IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSL

Query:  RIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSGTIEEELLYGPWLRELV
        R++I I++ + LK  +F+K  G   +  + + YE+LP+FC+ CG + H  KEC  Y G  +EE  +G W++ L+
Subjt:  RIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSGTIEEELLYGPWLRELV

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein8.0e-2834.54Show/hide
Query:  SILCKIYTGKNIIVN--VGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQV
        S +  I+  KN +    +G N+F  +F+N   + RILE GPW ++K LL+  E  G      + F++V FWI  H LP AC  R     +G L+ +V+++
Subjt:  SILCKIYTGKNIIVN--VGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQV

Query:  DIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKEC--DTYSGTIEEELLYGPWLRELVKFKS
        D   E+       +RI++ IDV   LKRG+ +          + I YE+LPNFCY CG +GH +++C  +T   T      +GPW+R + + +S
Subjt:  DIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKEC--DTYSGTIEEELLYGPWLRELVKFKS

A0A5C7I4Y2 CCHC-type domain-containing protein4.0e-2736.63Show/hide
Query:  VGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIK
        VG N+F+  F N   + RI + GPW++EKSL+  E+P G      + F  V  W+  H++P  C  R  A  +   + EV  +DI  E+   W   LR+K
Subjt:  VGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIK

Query:  IRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSGTIE----EELLYGPWLR
        ++ID+HR LKR + +K   T     + + YE+LP FCY CG +GH IKEC       E    +   +G W+R
Subjt:  IRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSGTIE----EELLYGPWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054817.8e-3132.76Show/hide
Query:  KVTEEERASVFQLREGKITRSESQLVNSILCKIYTGKNIIVNV---------------------GFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEP
        K+T EE      +    +  +   L  S++CK+ + ++I   V                     GFN+FL  F  +  + RIL +GPW ++++L++ + P
Subjt:  KVTEEERASVFQLREGKITRSESQLVNSILCKIYTGKNIIVNV---------------------GFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEP

Query:  KGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFC
                MDF+ VS W+HF  L  AC  ++ AT +G+ +   E V+     +  W S LR+++R DV + L RGI +   G  G  WI I YE+LP+F 
Subjt:  KGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFC

Query:  YGCGHLGHTIKEC-DTYSGTIEEELLYGPWLR
        Y CG L H +K+C D    ++ + L YGPWLR
Subjt:  YGCGHLGHTIKEC-DTYSGTIEEELLYGPWLR

A0A6J1D765 uncharacterized protein LOC1110179021.0e-2733Show/hide
Query:  RSESQLVNSILCKIYTGKNI--IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGS
        R  ++ + S++  ++   N      +G N+++  F++   K R+L  GPW + KSLL+   P        M+F F +FWI  H +P+ C     A  +G+
Subjt:  RSESQLVNSILCKIYTGKNI--IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGS

Query:  LLREVEQVDIKDETYPKWSSS-LRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSG--TIEEELLYGPWLRELVK
         L +VE  +I+ +    W+   +R++++IDV + L+RGI +K+   G + W  + YEKLP+FCY CG +GH+ +EC+  S   T      YG WLR  + 
Subjt:  LLREVEQVDIKDETYPKWSSS-LRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSG--TIEEELLYGPWLRELVK

Query:  FKS
         KS
Subjt:  FKS

A0A7N2LIH6 Uncharacterized protein1.0e-2737.71Show/hide
Query:  IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSL
        I  +G ++FL +F + R K +++E+ PW YEK L+L +E +G+   + +  K+  FW+    LP  C  R S  EIG+ + +V +VD+ ++   +W   L
Subjt:  IVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSL

Query:  RIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKEC----DTYSGTIEEELLYGPWLR
        R++IR D    L RG  +   G G  RW+   YE+LPNFCY CG L H  K+C    D  +   EE   YG WLR
Subjt:  RIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKEC----DTYSGTIEEELLYGPWLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.6e-0422.39Show/hide
Query:  ILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSR
        IL  GPW +   + + +  +        +FK + FWI    +P         T IG                                   + G+F+++ 
Subjt:  ILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFVSFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSR

Query:  GTGGERWIAITYEKLPNFCYGCGHLGHTIKECDT
               +   YEKL NFC  CG L H   EC T
Subjt:  GTGGERWIAITYEKLPNFCYGCGHLGHTIKECDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATTCAACAGAGGAGGAGATGTTATCAAGGCAGCTTGTAGAATTGAAAGTTACGGAGGAGGAAAGAGCTAGTGTGTTCCAACTTCGAGAAGGCAAAATTACACG
TTCTGAATCACAATTGGTCAACTCAATCCTGTGCAAAATTTACACGGGGAAAAATATTATTGTCAACGTGGGGTTCAATGTGTTCTTATGTAAATTCAGAAATGCCAGAG
TCAAAGGACGAATCTTGGAACTAGGACCTTGGTTCTACGAAAAATCGCTTCTTCTTTTTGAAGAGCCTAAAGGAGACTGTTATGCGGAAGGAATGGATTTTAAATTTGTT
TCTTTTTGGATTCATTTTCACAAATTGCCTTATGCTTGTTTTCCCAGGTCCTCGGCAACGGAGATAGGAAGCCTTCTGAGAGAGGTCGAACAAGTGGATATCAAAGATGA
AACATATCCAAAGTGGAGCAGCTCCTTAAGGATTAAAATTAGAATTGATGTTCACAGATCGTTAAAGCGGGGTATTTTTATGAAATCTAGAGGAACCGGTGGAGAAAGAT
GGATCGCTATCACCTATGAAAAGCTTCCGAATTTCTGCTACGGATGTGGTCATTTGGGTCATACAATAAAAGAATGTGATACGTATAGCGGCACAATTGAGGAGGAACTC
TTGTATGGTCCTTGGTTACGTGAACTGGTTAAATTTAAGAGTTATGTGAAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATTCAACAGAGGAGGAGATGTTATCAAGGCAGCTTGTAGAATTGAAAGTTACGGAGGAGGAAAGAGCTAGTGTGTTCCAACTTCGAGAAGGCAAAATTACACG
TTCTGAATCACAATTGGTCAACTCAATCCTGTGCAAAATTTACACGGGGAAAAATATTATTGTCAACGTGGGGTTCAATGTGTTCTTATGTAAATTCAGAAATGCCAGAG
TCAAAGGACGAATCTTGGAACTAGGACCTTGGTTCTACGAAAAATCGCTTCTTCTTTTTGAAGAGCCTAAAGGAGACTGTTATGCGGAAGGAATGGATTTTAAATTTGTT
TCTTTTTGGATTCATTTTCACAAATTGCCTTATGCTTGTTTTCCCAGGTCCTCGGCAACGGAGATAGGAAGCCTTCTGAGAGAGGTCGAACAAGTGGATATCAAAGATGA
AACATATCCAAAGTGGAGCAGCTCCTTAAGGATTAAAATTAGAATTGATGTTCACAGATCGTTAAAGCGGGGTATTTTTATGAAATCTAGAGGAACCGGTGGAGAAAGAT
GGATCGCTATCACCTATGAAAAGCTTCCGAATTTCTGCTACGGATGTGGTCATTTGGGTCATACAATAAAAGAATGTGATACGTATAGCGGCACAATTGAGGAGGAACTC
TTGTATGGTCCTTGGTTACGTGAACTGGTTAAATTTAAGAGTTATGTGAAGGAGTGA
Protein sequenceShow/hide protein sequence
MVDSTEEEMLSRQLVELKVTEEERASVFQLREGKITRSESQLVNSILCKIYTGKNIIVNVGFNVFLCKFRNARVKGRILELGPWFYEKSLLLFEEPKGDCYAEGMDFKFV
SFWIHFHKLPYACFPRSSATEIGSLLREVEQVDIKDETYPKWSSSLRIKIRIDVHRSLKRGIFMKSRGTGGERWIAITYEKLPNFCYGCGHLGHTIKECDTYSGTIEEEL
LYGPWLRELVKFKSYVKE